Antrostomus carolinensis (chuck-will's-widow): 104526679
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Entry
104526679 CDS
T08541
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104526679 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
acar04990
]
104526679 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
acar04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
104526679 (SYNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
Calsarcin
PDZ_2
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
104526679
NCBI-ProteinID:
XP_010168513
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MLPNCTRKMGTGDYLCIAMSGGAPWGFRLQGGKEQKQPLQIAKVRSKSKAAKAGLCEGDE
VVSINGKPCGDLTYAEVIVLMESLTDVLQMLIKRSSNGINETLSAERENGKQDNIKNEDY
RESTTLQINTAKEIPHGDLCITEIYSETHQGAGESNIHLSEMKQETTQSHRITPKVVGTS
KVLVTDEAAFRGKTEERRPGTMVELQLSLTNHAHKDTNAPAVTLLGAENCAPSGKGPSVQ
QDGTSPVIAIPLGVKEGNIQWSSKVVQFSSGKEVKRIQGAAPSLPRVEVILDCSDREKEA
PKSLAERGCVDSQVEGGQSEAPPSLLSFAISSEGTEQGEEDQHSEKDHRPLKHRARHARL
RRSESLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELE
RDEDEGEEGEGEEGDKENTFEVSLLATSESEIDEDFFSDIDNEGKIVTFDWDSGLLEVEK
KAKSGDEMQTLPESTGKGAIMFAKRRQRMDQITAEQEEMKARTTHTEERREATTSENFQK
VSSSVYQTKEEEMSRQQTCVSKSYADMSQNHSKMVQQNGFGLAPDTNLPFQSSEAQKAAS
LNKTAKPFPSGVQNRAAAPFSPTRNVTSPLSDIPAPPPYCSISPPPEALYRPVSAPVASR
ATPTVWSLTEPPEHIASRDERIAVPAKRTGILQEAKRRSTSKPMFTFKEAPKVSPNPALL
SLVHNAEGKKGTGAGFESGPEEDYLSLGAEACNFMQTQASKQKAPPPVAPKPSLKISPTA
GTPVSPVWSPAAVASNKAPSFPAPASPQAAYPAPLKSPQYPHSPAHPPSTLNLAGPFKGP
QATLASPSHTPKTTPVTPSSGGTKPPFEMPPAMSGKGAQLFARRHSRMEKYVVDSETVQA
NMARAPSPTPSLPASWKYSSNVRAPPPVAYNPIHCPSYPPAATKLSSKSTAATKNTKRKP
KKGLNALDIMKHQPYQLDASLFTFQPPSTKESLAIKQTSKLSTSKQALPLRPPSAGSPTN
ARASSVYSVPAYSSQPSFQSNASTPVNESYSPTGYSAFSKPETTTSSLFTAPRPKFSAKK
AGVTAQERSSGRSLSLPGRPSSFISRAMSPTSLVFQPAPDYFSKPDTAADRPGKRLTPWE
AAARSPLGLVDEAFGPQNMQESIAANVVSAARRKTLPEPPDEWKQKVSYEPPAPGGSVAL
FAGKQSGVVLPRRSSLSAPSVPTQAGSQLRYAYGSQQSRTDPDRMSMDSRSDYCLSTGDS
NYNPQPRGWRRPT
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgctgcctaactgtaccaggaaaatgggcacaggggattatctctgcattgctatgagt
ggaggggcaccgtggggctttagattgcaaggtggcaaggagcaaaagcagcctttgcaa
atcgccaaggtgcgcagcaagagcaaagcagctaaggctggactgtgcgagggagatgag
gtggtgtctatcaatggcaagccttgtggagacttaacctatgctgaagttattgttctg
atggaaagcctgactgatgtcctgcagatgcttatcaagagatcctccaatgggataaat
gaaaccttgagtgctgaaagagaaaatggaaagcaggataacataaaaaatgaggactat
agggagagtaccacactgcaaattaacacagcgaaagagataccccatggagatttatgt
atcacagagatatacagcgagactcaccagggagcaggagaaagcaacatacacttatct
gaaatgaaacaagagaccacacaaagccacagaattactcctaaagtggtgggcacctcc
aaagtgcttgtgacagatgaggctgctttcagagggaagacagaagaaagaaggccaggt
actatggttgagttgcagttgtccctcacaaatcatgcgcacaaggacaccaatgctcct
gctgtgactctcttaggggcagaaaactgcgccccttcaggaaaaggacccagtgtacaa
caagatgggactagccctgtaatcgcaattcccctgggcgtgaaagagggcaacatccag
tggtcaagtaaagtagtccagttttctagtggcaaagaggtcaagaggatccaaggtgca
gctccatctctccccagggtggaggtgatcctagactgttcggatagggagaaggaagca
cccaagtctctagctgaaagggggtgtgttgattctcaagtggaaggagggcagtcagaa
gcacctccttccctcctctcctttgcaatctcatcagaaggcacagagcagggagaagag
gatcagcactcggaaaaggatcacagacctctcaagcacagggcaaggcacgcaaggctc
cggcgaagtgagagtctgtcagagaagcaggtcaaagaagccaaatctaaatgtaaaagt
attgcattgctgctgacagcagcacccaaccccaattccaagggggtgttgatgttcaag
aagcgtcgccaaagggcgaggaaatatactttagttagctacggtactggagagttagaa
cgtgacgaagacgagggtgaagaaggtgaaggtgaagagggggacaaagaaaacactttt
gaagtgagtttgcttgcaacaagcgagtcagaaatagatgaagatttcttctctgacatt
gacaacgaaggtaagattgtgacatttgactgggacagtggtctacttgaggttgaaaag
aaagcaaaaagtggagacgagatgcagacgcttccagaaagcacagggaaaggggccatc
atgtttgccaagagacggcagaggatggatcagatcacagctgagcaagaggagatgaag
gcacgcacaacgcacacagaggaacgaagggaagccaccacgtcagagaacttccagaaa
gtaagctcttcagtctatcaaacaaaagaggaagaaatgtcaagacagcagacctgcgtg
agcaaaagctacgcagacatgagccagaatcacagcaaaatggtacaacaaaatggcttt
ggcttagcaccagacacaaaccttccttttcagtcctctgaagcacaaaaagcagcatct
ctgaacaaaacagctaaacccttcccttctggggttcaaaaccgagcggccgcaccattt
tcacccacaagaaatgtcactagtcctctttcagatataccagcaccacctccttactgc
tctattagcccaccacctgaggctttatacagacctgtttcagctcctgtagccagcaga
gctaccccaactgtgtggtcactcactgagccaccagaacacatagcatccagagatgaa
aggattgcggtgccagccaaaagaactgggatactgcaagaggctaagagaagaagcacc
tcaaaacctatgttcactttcaaagaagcacccaaagtaagtcctaaccctgccctgttg
tcccttgtacacaatgcagagggcaaaaaaggtactggagctggttttgagtcaggacct
gaagaagactacctcagtttgggagcagaagcttgcaatttcatgcagactcaagcatct
aaacaaaaggcccctcctcctgttgctccaaagccttcactcaagatctctcctactgct
ggtactccagtttcaccagtttggtcacctgcagctgtggcttccaacaaggctccttcc
ttcccagcaccagcctcacctcaggcagcatatcctgcaccactcaaatctccacagtat
cctcattctcctgcccatcccccaagtaccctcaacctagctggtcctttcaaagggcct
caggcaaccctagcgagtccaagccatacacccaagacaacaccagtcaccccaagttct
ggaggaacaaagccaccctttgagatgccaccagcaatgagtggaaaaggagcacagtta
tttgccagaaggcactctcgaatggagaagtatgtggtagattcagagactgtgcaggca
aacatggcacgagccccatctccaactccatctttaccagcctcttggaaatattcatct
aatgtccgagcacctccacctgttgcttataatcccattcactgcccatcttatcctcct
gctgctaccaagctctcctctaagtccactgctgctaccaaaaatacaaaaagaaaacct
aagaaaggtctcaatgctttggatattatgaaacaccaaccttatcaacttgatgcatct
ttatttacttttcaacctcctagcactaaggaaagccttgctattaagcagacgtcgaag
ttgtccacttcaaagcaagctctacctttaagaccacctagtgctggttctcctactaac
gcccgggcatcttcagtgtactccgtgccagcctacagttcacaaccttcgttccagtca
aatgcctctaccccagtaaatgaatcatattcacctaccggctactccgcattttctaag
ccagaaaccaccacatcctctttgttcactgctccgaggccaaaattttcagcaaagaaa
gctggcgtcactgcacaggaaagaagcagtggacgctcattatcactacctgggagacca
tcttcatttatttctcgagccatgtctcctacttctcttgtatttcagcctgcccctgat
tacttcagcaagccagacacagcagctgacagacctggcaagagactgactccctgggaa
gcagcagcaagatcccctcttggtctagtggatgaagcttttgggcctcaaaatatgcag
gaatccattgctgctaatgtcgtatcagctgctcgcaggaaaacacttcctgagccacca
gatgaatggaaacaaaaagtttcttacgagcccccagccccaggtggtagcgtagcctta
tttgcagggaagcaatcaggtgttgtattgccccgcagaagctccctgtctgcccccagt
gttcccacgcaggctggctctcagctgaggtatgcttatggcagtcaacagtccagaaca
gatcctgacaggatgtccatggattccaggtctgactattgcctgtcaacaggtgattcc
aactacaacccacagccaaggggatggaggcgtccaacatga
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