Antrostomus carolinensis (chuck-will's-widow): 104526870
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Entry
104526870 CDS
T08541
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 1
KO
K11101
patched 2
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104526870
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GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
104526870
NCBI-ProteinID:
XP_028941405
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MRALPALALTGHAVVLSAAGSRVSQELRYTKEKLGEESVYTSQMLIQTPKRDGENILTQE
ALELHLEAALAASKVQVSLYGKSWDLNKICYKSGVPIIENGMIERMIEKLFPCVILTPLD
CFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLMEELGQFTSLEGFKELLDKAEVGQAYMER
PCLNPRDPQCPLSAPNKQSQQSPDIPAELSGGCHGFSRKFMRWQEELILGGTTKDSQGKL
LRAEALQTMFLLMSPRQLFEHFKDDYEIHDISWSEEKAGAILEAWQRKFVELAQDSIPSN
ATQSVHAFSTTTLNDIMKSFSDVSAIRVAGGYLLMLAYACVTMLRWDCSRSQGAVGLAGV
LLVALSVASGLGLCSLLGISFNAATTQVLPFLALGIGVDDMFLLAHAFTETSQHIPFKER
TGECLKRTGTSVALTSISNMIAFFMAALVPIPALRAFSLQAAVVVVFNFAMVLFVFPAIL
SLDLHRREKRRLDILCCFYSPCSSRVIQIQPQELADANDNHACHPSPYGHPSMATSTQIT
TTVQAFTRCDPSGHHVVTVLPPTSQVCTSPTVLLPPTDPLGSQVFAPSSSTRDLLAQLDE
AKGGRECVPLPFCRWSLADFAREKYAPLLLRTRTKAVVAVLFLALLGLSLYGTTMVHDGX
XXXXXXXXXPRDTKAPAFISAQLNYFSFYNMFIVTKGGFHYPGAQAALLNLHQAFSTVKY
VVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGRIXXXXXXXXXXXXXXXXXXXXQTG
NKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWAS
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgagggctctgccagccttggcactgacaggacacgctgtggtcctctctgcagcaggc
agccgggtgagccaggagcttcgatacaccaaggagaagctgggtgaggagtctgtctac
acatcccagatgttgatccagaccccaaagcgggatggggagaacatcctgacgcaggag
gccctggagctccacctcgaggcggccctggccgccagcaaggtccaagtctcgctgtat
ggaaaatcgtgggatttgaataagatctgctacaagtcaggtgtccccatcattgagaat
ggcatgatcgagaggatgatagagaagctgttcccctgcgtgatcctgacaccgctggac
tgcttctgggaaggctccaagctgcagggaggctcagcctacctcccgggccgcccagac
atccagtggagcaacctggaccctctgcagctgatggaggagctgggccagttcacatcc
ctggaaggcttcaaagagctgctggataaagcagaggtggggcaggcttacatggagcga
ccctgccttaacccccgggacccccagtgccccctcagtgcccccaacaagcagagtcag
cagagccccgacatcccggccgagctctcggggggctgccacggcttctccaggaagttc
atgcgctggcaggaggagctgattttaggcggcacgaccaaagactcccagggcaagctg
ctacgcgccgaggccctgcagaccatgttcctcctcatgagcccccggcagctctttgag
cacttcaaggacgactacgagatccatgacatcagctggagcgaggagaaggcgggtgcc
atcctggaggcctggcagaggaaatttgtggagctggcgcaggactccatcccatccaat
gccacacagagtgtccacgctttctccaccaccacactcaatgacatcatgaagtccttc
tctgacgtcagcgccatccgggtggctgggggctacctcctcatgctggcctacgcctgt
gtcaccatgctgcggtgggactgctccaggtcccaaggggccgtgggcctggccggcgtc
ctgcttgtggctctctctgtggcctctggcctggggctttgctcactgctaggcatctcc
ttcaacgcagcaaccacccaggtcctgcccttcctggcccttggcatcggtgtggacgac
atgttcctcttagctcatgccttcactgagaccagccagcacatccccttcaaggagcgg
acgggcgagtgcctgaagcgcacggggaccagtgtggctctcacctccatcagcaacatg
attgccttcttcatggcagccctggtgcccatccctgccttgcgtgccttctccctccag
gctgcggtggttgttgtgttcaactttgccatggtgctattcgtctttcctgccatcctg
agcctggacctgcaccgccgggagaagcgccggcttgacatcctctgctgcttctacagc
ccttgctcctcgcgtgtcatccagatccaaccccaggagctcgctgatgccaatgacaac
catgcctgccacccctccccttacgggcaccccagcatggccaccagcacccagatcacc
accactgtgcaagccttcacccggtgtgatccctcaggccaccatgttgtcactgtcctg
ccgcccacctcccaggtgtgcacctcacccaccgtcctcctgccccccaccgaccccctg
ggctcgcaggtcttcgccccatccagctccacccgggacctgctggcccagctggacgag
gccaagggtgggcgggagtgcgtccccctgcccttctgccgctggagcctcgccgacttt
gcccgggagaagtacgctccgctcctcctgcgcacccggaccaaggcagtggtggcagtg
ctgttcctggcactgctggggctaagcctctacggcaccaccatggtgcacgacgggnnn
nnnnnnnnnnnnnnnnnnnnnnnnnngccgcgggacaccaaggcgcccgccttcatctcg
gcccagttgaattacttctccttctacaacatgttcatcgtcaccaagggcggcttccac
tacccaggcgcccaagctgccctgctcaacctgcaccaagccttcagcaccgtcaagtac
gtggtgcgggagggcaaccgtgacctgcccaagatgtggctccactactttcaggactgg
ttgcgagggctccaggccacctttgacagggactggcaagctgggcgcatcnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccagaccggc
aacaagaaggagcccttcaacttcaatcagctgacaacgcggcggctggtggatgagaat
ggcatcatcccccctgacaccttctacatctgcctgacggtgtgggccagc
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