Antrostomus carolinensis (chuck-will's-widow): 104527063
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Entry
104527063 CDS
T08541
Name
(RefSeq) slit homolog 2 protein
KO
K06839
slit 2
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104527063
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acar00536
]
104527063
Glycosaminoglycan binding proteins [BR:
acar00536
]
Heparan sulfate / Heparin
Axon guidance molecules
104527063
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
LRRNT
LRR_9
LRRCT
LRR_1
hEGF
EGF_TEN
LRR_14
Laminin_G_1
EGF_3
Laminin_G_2
EGF_TGFA-like
JAG1-like_EGF2
EGF_Teneurin
EGF_DL_JAG
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
104527063
NCBI-ProteinID:
XP_010168982
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
DLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSV
ASFNHMPKLRTFRLHSNNLYCDCHLAWLSDWLRQRPRVGLYTQCMGPSHLRGHNVAEVQK
REFVCSGHQSFMAPSCSVLHCPTACTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNSI
KVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFHGLRSLNSLVLYGNKITELPKGLFEGLF
SLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLHLAQNPF
ICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDY
RSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLEATG
IFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLESVRHKMFKGLESLKTLM
LRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNLLANPFNCNCHL
AWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLSRCPAECT
CLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTL
SNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALS
HLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQGPMD
VNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIPIHACISNPCHHGGTC
HLKEGEKDGFWCTCADGFEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLCPPEYTGEL
CEEKLDFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGEHCDIDFDDCQDNKCKNGAQCT
DAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNYECQNGAQCIIKESEPICQCLSGYQ
GDRCEKLVSINFVNKESYLQIPSAKIRPQTNITLQIATDEDSGILLYKGDKDHIAVELYR
GRVRVSYDTGSYPASAIYR
NT seq
3301 nt
NT seq
+upstream
nt +downstream
nt
tgatcttagtgaaaatcagattcaagcaataccaaggaaggcatttcgaggagcagtaga
cataaaaaatctgcaactggattacaaccagatcagctgtattgaagatggggcatttag
ggctctgcgcgacctggaagtgctcactctcaacaataacaacattactcgactgtctgt
ggcaagtttcaaccatatgccaaaactcagaacatttcgtcttcactccaacaacctcta
ctgtgattgccacctggcctggctgtctgactggctgcggcagcggccacgggttgggct
ctacacccagtgcatggggccatcccacctgcgggggcacaacgtagccgaggtccaaaa
acgggagtttgtctgcagtggtcaccaatccttcatggctccatcctgcagtgtcttgca
ctgccctactgcatgcacctgtagtaacaacattgtggactgtcgtgggaaaggccttac
tgagatcccaacgaaccttccagaaaccattactgaaatacgattagaacaaaattcaat
caaggtcatacctcctggagctttctcaccgtataaaaagcttcgaagaattgacctgag
caataaccagatctctgaagcagctccagatgctttccatggcttgcgttcactcaattc
acttgtcctctatggcaataaaattacagaacttccaaagggcctgtttgaaggactttt
ttctctgcaattgctattattgaatgccaacaagatcaattgcctgcgagttgatgcttt
tcaagatctgcacaacttgaatcttctttctttgtatgacaacaaacttcagaccattgc
aaaaggcaccttctcacccctacgtgcaatccagaccttgcacttggctcaaaacccatt
tatctgtgactgccatctgaagtggctggcggattatcttcatacaaaccccattgagac
cagtggtgcccgttgcaccagcccccgccgtctggcaaacaaaaggattggccagatcaa
aagcaaaaaattccgctgctcagctaaagaacagtatttcattccaggcactgaagatta
cagatccaaattaagtggagactgctttgcagatttggcttgccctgagaaatgtcgctg
tgaagggaccacagtggactgctccaatcagaaactcaacaaaattcctgatcacatccc
tcagtacacagcagagttgcgactaaataacaatgagttttcagtcctggaagctactgg
aatctttaagaaacttcctcagctgcgtaaaataaacctgagcaataacaagattactga
tatcgaagaaggagcatttgatggagcctctggtgtgaatgagctattgctcactagcaa
ccgcttggaaagcgttcgacacaaaatgttcaaaggactagaaagtctcaaaacactgat
gctgaggagcaaccgcgtgagctgtgtgggaaacgacagcttcacgggcctgagctcagt
ccgcctgctctcgctatatgacaaccagatcaccacggtggcacctggctccttcgatac
cctgcattcactctctacattaaacctcttggccaatcccttcaactgcaactgccatct
tgcatggcttggagactggctaaggaagaaacgcattgtgacggggaaccctcgctgcca
aaaaccctacttcctcaaagagattcccatccaggatgtggcaattcaggattttacgtg
cgatgatggaaatgatgacaatagctgctctccactgtcccgctgtcctgcagaatgtac
ttgtctagatacagtagttcgctgcagcaacaaaggcctaaaagctttgcctaaaggcat
cccaaaagatgtaactgagctttatttggatggaaatcaatttacacttgttccaaaaga
gctttccaactacaagcatttaacactcatagatttaagtaacaacagaatcagcactct
ttctaatcagagcttcagcaacatgactcagctgctcaccttaattcttagttacaaccg
cctgaggtgtatccctgcacggacttttgatgggttgaaatcacttaggttgttgtcatt
acatggaaatgatatttctgttgttcctgaaggagcttttaatgatctttcagcattgtc
acacctggctattggagcaaatcctctttattgcgattgtaacatgcagtggctatctga
ctgggtaaaatcagaatacaaagaacctggtattgcacgttgtgctggtcctggagaaat
ggcagacaaacttcttctcacaactccttctaaaaaatttacttgccaagggcccatgga
tgttaatattcttgctaagtgtaacccctgtttatcaaatccatgtaaaaatgatggaac
ctgcaacaatgatccagtagacttctatagatgtacttgcccgtatggtttcaagggtca
agactgtgatattcccattcatgcttgcattagtaacccgtgccaccatggcggaacttg
ccatttgaaagaaggagaaaaagatggtttctggtgcacttgtgcagatggatttgaagg
tgaaaactgtgaagtaaatgttgatgactgtgaagacaatgactgtgagaataattctac
ttgtgtggatggaattaataactatacttgcctttgtccacctgaatatacaggtgagct
ctgtgaggagaaactagatttctgtgctcaaaacctgaatccttgccaacatgactcaaa
gtgtattctgacacccaaaggatacaaatgtgattgcacacctggatatgtaggtgagca
ttgtgatattgactttgatgactgccaggacaacaaatgtaaaaacggagcacagtgtac
tgatgcagttaatggatatacgtgtatttgcccagaaggatacagtggcttgttttgtga
gttttcaccaccaatggttctacctcgcaccagcccttgtgataattatgaatgtcaaaa
tggagcccagtgtatcataaaagagagtgaaccaatctgtcagtgtttatcaggctacca
gggtgacagatgtgaaaagctggtcagtataaactttgtcaacaaagaatcctatctaca
aatcccttcagccaagatacgtccccaaaccaatatcactctacagattgccacagatga
agacagtgggatcctgctctacaaaggcgataaagatcatatagcggtagagctgtaccg
aggtagagtgagggtcagttatgacacaggatcttatccagcctctgctatttacaggtg
a
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