Antrostomus carolinensis (chuck-will's-widow): 104527136
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Entry
104527136 CDS
T08541
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03030
DNA replication
acar03420
Nucleotide excision repair
acar03430
Mismatch repair
acar03440
Homologous recombination
acar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104527136 (RPA1)
03420 Nucleotide excision repair
104527136 (RPA1)
03430 Mismatch repair
104527136 (RPA1)
03440 Homologous recombination
104527136 (RPA1)
03460 Fanconi anemia pathway
104527136 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acar03000
]
104527136 (RPA1)
03032 DNA replication proteins [BR:
acar03032
]
104527136 (RPA1)
03400 DNA repair and recombination proteins [BR:
acar03400
]
104527136 (RPA1)
Transcription factors [BR:
acar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104527136 (RPA1)
DNA replication proteins [BR:
acar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104527136 (RPA1)
DNA repair and recombination proteins [BR:
acar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104527136 (RPA1)
MMR (mismatch excision repair)
104527136 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
104527136 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
RADX
DUF4939
Motif
Other DBs
NCBI-GeneID:
104527136
NCBI-ProteinID:
XP_010169066
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MQGENVSKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNSLVEEERLAAQ
CICQVNRFIVNSLKDGRRVVILMDLNVLKTADKVGGNIGNPVPYNEGQAQQRSSAPAANP
APSKPQQQNGNLSVTGPAAPKYHAPSNQFSRASVSSSAKTPGGSQAKVVPIASLNPYQSK
WTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYY
FTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVSISDLENTPKDAI
VDVIGICKSYEDVTKITVKANNREVLKRNVHLMDTSGKLVTATLWGNEAEQFDGSRQPVV
AIKGARVSDFGGRSLSVLSSSTVVINPDSPEAFKLRGWFDSEGQLLECASISDVRGGPAA
GANTNWKTLFEAKSENLGQGDKADYFSCVGTVVHLRKENCMYQACPSQDCNKKVIDQQNG
LYRCEKCDREFPNFKYRMMLLVTIADCLEYQWVTCFQESAEFILGQSAAFLGELKEKNEQ
AFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAMDVKPVNYREYSKRLIASIRRNAQL
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcagggggagaacgtctccaagcccgtcctgcaagtcatcaatacacgggctattgct
acgggaaatgggccaccacgttaccgagtgttgatgagcgatggggttaacacactgtcc
tcgttcatgttggcaacacagctgaactctctggtggaagaggaacgtttagcagcccag
tgtatttgccaggttaacagattcattgtcaacagcctgaaagatggaaggagagtggtt
atactgatggatttaaatgttctgaaaactgctgataaggttggtgggaatattggcaat
ccagtgccgtacaatgaagggcaagcacagcaacgttcttcagctccagcagcaaacccg
gcacccagtaaaccacagcaacaaaatggcaatttgtcagtaacaggtcctgctgctccg
aagtaccatgctccctcaaaccagtttagcagagcgagtgtttccagctcagcgaagaca
ccagggggatctcaggccaaagtcgtgccgattgccagcttgaacccataccagtctaag
tggaccatttgtgctcgtgttacccaaaaaggccagatccgcacgtggagcaactcccgt
ggagaaggaaagctcttttctatagagctggttgatgaaagtggtgagattagagctact
gcattcaatgatcaagcagacaagttctttccacttattgaattgaacaaggtatattat
tttaccaaaggcaatttgaagactgctaacaagcaatatacagctgttaagaatgactat
gagattacattcactaatgagacttcggttgtgccctgtgatgatgcccagcatcttcca
tctgttcagtttgattttgtatccatctctgacttggagaacacgcccaaagatgcaatt
gttgatgtaattggaatttgtaagagctatgaagatgtcactaaaattacagtgaaagct
aacaatagggaagtattgaagaggaacgtgcatctgatggatacatcagggaaactggtg
acagctacgctatggggaaatgaggctgaacagtttgatggttctagacaacctgtggta
gccatcaaaggagcccgagtctctgattttggtggtaggagcctgtctgtcctgtcctcc
agtacagttgtcatcaaccctgatagcccagaggcttttaagctccgaggatggtttgac
tctgaggggcagcttctggaatgtgcctccatctcagatgtgaggggtgggccagcagct
ggggcgaataccaattggaaaactttgtttgaagccaaatctgagaacttgggacaagga
gataaggcggattattttagctgtgtgggcacagtcgtacatctgcgcaaagagaactgt
atgtaccaggcatgtccctctcaggattgtaataagaaagtgatagaccaacaaaatgga
ctgtatcgttgtgaaaagtgtgatcgtgaattccccaacttcaagtaccgcatgatgctt
ctggtgaccattgcagactgcctggagtatcagtgggtgacttgtttccaggagtcagca
gaattcattcttgggcaaagtgcagctttcctgggagaactgaaggaaaagaacgagcag
gcatttgaagaagtgttccaaaatgcaaacttcaacacctatgagttcaggatccgggta
aaactggagacttacaatgatgaatctcgtattaaggccacagcaatggacgtcaaacct
gtgaactacagagaatacagcaagcggttgatcgcgagcatcaggagaaacgctcagcta
gggtga
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integrated database retrieval system
