Antrostomus carolinensis (chuck-will's-widow): 104527169
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Entry
104527169 CDS
T08541
Symbol
NUP54
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104527169 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104527169 (NUP54)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104527169 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
104527169
NCBI-ProteinID:
XP_010169120
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MPVLSLVMKKYFSFSFLXPAFYLELMLPCSFSASRLSGFGGLETTNSTASGFNFGGFGLT
ANPAVNFNIGNFGVSTTSTPPFNFGNSLASAGAFGGFGTTTTTAAPAFSFSAPTNTGTSG
LFGTTQNKGFGFGTSFGTGTGTGLGSGLGTGLGFGGFGTQQQQTTLGSGLFSQPAQTPAQ
SNQLINTASALSAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRF
KAVGYSLMPNNKDEDGFVVLVFNRKETDIRSQQQQLVESLHKILGGNQTLTVNVEGVRTM
PDDQTEVIIYVVERSPNGTSRRVPATTLYAHFEQANIKSSLQQLGVSLSMARTELSPAQV
KQLLQNPPAGVDPIIWEQAKVDNPDPDKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDI
ISEDISELQKNQTTTMAKIAQYKRKLMALSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQ
LDTIQCELNAPTQFKGRLNELMSQIRMQNHFGAVRAEERYYIDADLLREIKQHLKQQQEG
LSHLISIIKDDLEDIKLIEHGLNETIPIRGGVFS
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcttgtccttagtgatgaaaaaatattttagcttttcttttctgnaacctgct
ttttacttagaactaatgttaccttgctctttttctgcttcccgcttgtcaggatttggt
gggcttgaaactacaaactccactgccagtgggtttaattttgggggtttcggattaact
gctaatcctgcagtgaattttaatattgggaatttcggtgtttccactacctcaactcca
ccattcaattttggtaacagtctggcaagtgcaggtgcattcggaggattcgggacaact
accaccactgcggctccagcatttagtttttctgctcctaccaacacaggcaccagtggg
ctctttggcactacccagaataaaggctttggatttggtactagttttggcacaggaact
ggaactggcttgggtagtgggttgggaactgggctgggctttggaggcttcggtacccag
cagcaacagaccacattaggaagtggcttgttcagccaacctgctcagacacccgcccag
tcaaaccagctcatcaatacagccagtgccctctccgctcccacactcctaggagatgag
agagacgctattttggcaaaatggaaccagctccaggccttctggggaacaggcaaaggg
tacttcaacaacaacatcgcccccgtggagttcactcaagaaaaccccttttgcaggttt
aaggctgtgggttacagtttaatgcccaacaacaaagatgaagatggcttcgtggtcttg
gtcttcaacagaaaagaaacagatattcgaagccagcagcagcagctcgtagaatcacta
cacaaaattctgggaggaaaccagaccctcactgtcaacgtggaaggtgttagaacgatg
ccagatgaccagacagaagtgatcatctatgtcgtggagcgctcgcccaacggtacttcg
aggagagttcctgcaacgaccctctacgcccactttgaacaagccaacataaaatcatcc
ctgcagcagctgggggtcagcctctccatggccagaacagagctttccccagcacaagtc
aaacagctcctgcagaaccctcctgctggtgttgatcctattatatgggaacaagccaaa
gttgataatcctgatcctgacaagcttattcctgtgccaatggtgggtttcaaggaactg
ttgagaagattgaaggtccaagatcagatgaccaaacagcatcaaactcgattagatata
atatcagaagatatcagtgagctgcagaaaaaccaaacgacaactatggcaaaaattgca
cagtacaaaaggaaactgatggctctttctcacaggacattacaggtgttaataaagcag
gagatccaaaggaaaagtggttatgccattcaagcagacgaagagcagcttcgtgtacag
ttagataccattcagtgtgaacttaatgcacctacacagttcaagggcagactgaatgag
ctcatgtcccaaatcaggatgcaaaaccactttggagcagtgcgggccgaagagcgctat
tacatagatgcagacctcttgagggaaatcaagcagcatctgaagcagcagcaagaaggc
ctgagtcacctaatcagcattataaaggatgatttggaggacatcaaacttatagaacat
gggctgaacgagaccattcccatcagaggaggagtcttcagttga
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