Antrostomus carolinensis (chuck-will's-widow): 104527688
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Entry
104527688 CDS
T08541
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acar03009
]
104527688 (DDX55)
Enzymes [BR:
acar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104527688 (DDX55)
Ribosome biogenesis [BR:
acar03009
]
Eukaryotic type
Pre-60S particles
Helicases
104527688 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
SurA_N_3
AAA_22
SBF_like
Motif
Other DBs
NCBI-GeneID:
104527688
NCBI-ProteinID:
XP_010169778
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
SATIPLFMNNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAIIITPTRELAI
QIDEVLSHFTKHFPRFSQILLIGGRNPMEDVEKFKEQGGNIIVATPGRLEDLFRRKADGL
DLASCVKSLDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAG
LRNPVRISVKEKGMAASNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFST
CACVEYYGKALEALIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPE
VHWVLQYDPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKP
QTDVSDLLPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASLAKGFA
LLKMPKMPELRGKCFPDFTPVTVNTDSISFKDKNREKQRQKQLEQQRQERQENGGKKKFI
KNKAWSKQKAKREKKKKVTAKRKHEEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEK
RLTGSQSRLKAETVADLESEG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
tctgcgaccattccactcttcatgaataacaaagatgttgctgcagaagcggtaacaggc
agtggcaaaaccttagcatttgtgattcccatactggaaattcttctcagacgggaagaa
aaattaaagaaaatgcaggttggagctataattatcacaccaacaagagaattagctatt
caaattgatgaagtgctctcacatttcacaaagcacttccccaggtttagtcagattctt
ttaattggtggtaggaatcccatggaagatgttgaaaagtttaaagaacagggtgggaac
atcattgtagctacaccgggccgtttggaggatctgttcagaagaaaagcagacgggctg
gatctagcaagttgtgtgaagtctcttgatgtgttggtattagatgaagcagacagactt
ctagatatgggctttgaagcaagtttaaacgccattctggactttttgcccaagcagaga
cggacaggtttgttctcagcaactcaaactcaagaggtggagaacctggtgagagcaggt
ctccggaatcctgtccgcatctcggtgaaagagaagggaatggcagcaagcaacacacag
aaaactccaacacgcctggagaattattatatgatctgcaaagcagatgaaaaatttaat
cagttggtgcattttcttcgacagcacaaacaggaaaaacatctagtctttttcagcacg
tgtgcctgtgtggaatactatgggaaagctttggaagccttaattaaacaggtgaaaata
atgagcattcatgggaaaatgaagcacaagcgtaacaagatttttactgagttccggaag
ctcccaggtggcattttagtttgcactgatgtgatggctcgtggcatagacattccagaa
gtacactgggttttacagtatgacccacctagcagtgcaagcgcctttgtgcatcgctgt
ggtcgtacggcacgaatcggcaatgttggcagtgcactggtatttttgcttcccatggaa
gaatcttacattaactttctctcaatcaaccaaaagtgtcccatgcaggaaatgaaacca
cagacagatgtgtcagatcttcttccaaagctgaagtctatggccctggctgacagggca
gtgtttgagaaagggatgaaagcgtttgtgtcttacgtccaggcttatgccaaacatgaa
tgtaacctgatcttccgaataaaagatctggattttgctagccttgccaaaggttttgca
ttgttaaaaatgccaaagatgcctgaactaagaggaaaatgttttccagactttactcca
gtcactgttaataccgactccatttcatttaaggataaaaacagagaaaaacagagacaa
aaacaattagaacaacaaagacaagaaagacaggaaaatggagggaaaaagaaattcatt
aagaacaaagcctggtcaaagcagaaagccaagagggagaagaagaagaaagtaacagct
aaaaggaagcatgaagagggctccgatattgaagatgaggatatggaagagctgctgaat
gacacaagactcttgaaaagattaaaaaagggaaaaattagtgaagaagagtttgagaag
agactaacaggcagccagagtagactcaaagcagaaactgttgctgacttagagtctgaa
ggttga
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