Antrostomus carolinensis (chuck-will's-widow): 104527965
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Entry
104527965 CDS
T08541
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
acar04990
]
104527965 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
acar04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
104527965 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
fn3
EGF_2
EGF_CA
EGF_3
cEGF
NDNF
Motif
Other DBs
NCBI-GeneID:
104527965
NCBI-ProteinID:
XP_028941754
LinkDB
All DBs
Position
Unknown
AA seq
1208 aa
AA seq
DB search
VNNNGIISFLKEVSQFTPVAFPISKDRRVVAAFWADVDNRRAGDVYYRESTEQSILERAS
RDIAQYFPEFPGFSAQWVFIATWYRVTFFGGNSFSPVNTFQIVLITDGKLSFTIFNYESI
TWTTGMHASSGGDFAGLGGIAAQAGFNAGDGKRYFNIPGSRTDDIADVEMTTNVGIPGRW
VFRIDDAQVQVGGCSNTTSVCLTLRPCLNGGKCIEDCITGNPSYTCSCLAGFTGKRCHVD
VDECLSHPCQNGATCLNGAGSFSCRCPPGFRGANCETEESPCESRVCQNAGRCQAANGTA
TCLCQPGYMGPDCQTEVNECESSPCLNGGHCVDLVDNYTCMCLEPFVGQRCETGACSXED
RSCRNRQTCNYIRPGRYICTCSPGYYGNNCQYGGPRMPSACLSHPCQNAGSCLETEQGYV
CECRAGQTCRDKLSEGCECRNGGSCLEGNVTICQCPPGFFGLLCEFEVTTTPCNMNTQCP
DGGYCMEYGGSYLCVCHTDYGTNHTMPSPCDSEPCLNGGSCEVHDDSYTCECPQGFLGKH
CEKAKPRLCSTGPCRNGGTCREADGEYHCTCPYRFTGKHCEIGKPDPCASGPCQNGGTCF
HYIGKYKCDCPLGYAGRHCEIVPSPCILSPCENGATCEDLDGGYACTCPAGYVGKHCQSE
VDCGVPSEVKHAQASFNSTKVGSLAEYQCELGYTLSQHNHPRICRLPGVWSDPPECDEIN
ECQSQPCLNGGRCKDRVAEFLCLCEPGYTGHRCESDVDECQSDPCKNGGTCRDLPGSFAC
YCPERFMGMQCETEVDVCKSSPCRNGGECEGYGGSYLCVCPEGFFGYHCETAGPPVFPSP
WGSRGYCLPSNGTHSCTCKVSYTGKSCEKELLPPTSLKVERVEDTGVLISWHPPEDAAAR
QLIDGYAVTYVSLDGSYRRTDFVDRSRSAHQLRALASGRAYNISVFSVKRNVNNKNDISR
PVMLTTRTRPRPVEGFEITNVTASAITVQWALHRLKHSTVSRVRVSIRQPGDLADRTGEX
XXXXXXXXXXXXXXXXXXXXHVTTLSGLGTEDHPSESLATAPFHVWTRPLPPQNLTTSRV
TATSVSMAWEQPPARAVGGYIINVTTAQSVKSRYVPNGKLVSYTVRDLLPGQRYRLSVTA
VQNTEQGQVHSEPIHLYVTTLQRDGAPERRWSQAGHPRVLRNRLPPAFLPELRLLADHNT
AEEPSPAP
NT seq
3626 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacaatgggatcatctcattcctgaaggaagtctcccagttcacaccagtggcc
ttccccatctccaaggaccggcgcgtagtggctgctttctgggcggacgtggataaccgg
cgggcaggcgatgtgtattaccgggagagcactgagcagtccatcttggagagagcaagc
agggacattgcacagtatttccccgagttccccggcttttccgcacagtgggtcttcatt
gccacctggtaccgagtgaccttcttcgggggcaattcattttcgccagtaaacactttc
cagatcgttctcatcacggatggcaagctctccttcaccatcttcaactatgagtctatc
acctggaccacgggtatgcacgccagcagtgggggggactttgctgggctcggcggcatc
gcggcacaggcaggttttaacgctggtgatggaaagcgctacttcaacatccccggatcc
cgcactgatgacatcgctgacgtggagatgacgacaaatgtgggtatccccgggcgctgg
gtgttcagaatcgatgatgcccaggtgcaagtggggggctgcagcaatacaacctccgtc
tgcctcacgctgcggccctgcctgaatggggggaagtgtatcgaggactgcatcacgggg
aacccctcctacacctgctcctgcctggccggctttactgggaagaggtgccatgtcgat
gtggacgagtgtctctcccacccgtgtcagaatggagccacctgcctgaatggtgctggc
agcttcagctgcaggtgcccgccaggcttccgaggcgccaattgcgagaccgaagagtcg
ccatgtgagagcagggtgtgccagaacgccgggaggtgccaggcggcaaatgggacagca
acgtgcttatgccagccggggtacatggggccggactgtcagacagaggtgaacgagtgt
gagtccagcccatgcctgaacggtgggcactgcgtagacctcgtcgataactacacctgc
atgtgcctggagcccttcgtgggacagcgctgtgagacaggtgcctgctcnngtgaggac
cggagctgccggaaccggcagacgtgcaactacatccgccccggccgctacatctgcacc
tgctccccgggttattacggcaacaactgccagtacggtggaccccgcatgcccagtgcc
tgcctctcccacccctgccagaatgcgggcagctgcctggagacggagcagggctatgtc
tgcgagtgccgggccgggcagacctgccgggacaagctctcggaaggctgcgagtgtcgc
aatgggggcagttgtctggaggggaatgtcaccatctgccagtgcccgcctgggtttttt
ggtctcctatgtgaattcgaagtcaccaccacaccatgcaacatgaacacgcagtgcccg
gatggcggatactgcatggagtatggtgggagctacctctgtgtctgccacaccgactac
ggcaccaaccacacgatgccgtccccctgcgactcggagccctgcctgaacggggggtcc
tgtgaggttcacgacgactcctacacctgcgagtgtcctcaaggcttcctcggcaagcac
tgcgagaaagccaaaccacggctctgcagcacagggccctgtcgcaacgggggcacctgc
agggaggcggatggcgagtaccactgcacctgcccttaccgcttcaccggcaagcactgc
gagatcggtaagccagacccctgcgcctcggggccgtgccagaacgggggcacctgcttc
cactacatcggcaagtacaagtgcgactgtcccctgggctatgctggccggcactgcgag
attgtgccctctccgtgcatcctcagcccctgtgagaacggcgcgacctgtgaggacctt
gatgggggctatgcctgcacatgccccgcaggctatgtcgggaagcactgccagtctgag
gttgactgtggcgtccccagcgaggtgaagcatgcccaggcctctttcaattccaccaag
gtgggctcgctggctgaataccagtgtgagctgggctacaccctcagtcagcacaaccac
ccccgcatctgccgcttgccgggtgtctggagtgacccccctgagtgtgatgagatcaac
gagtgccagtcccagccctgcctgaatggtggccggtgcaaggaccgtgtcgctgagttc
ctgtgcctgtgtgagccgggttacaccggccaccgctgtgagtcagatgtcgacgagtgc
cagtcagatccttgcaagaatggtgggacctgccgggacctccctgggtccttcgcttgc
tactgtcctgagcgctttatggggatgcagtgcgagacagaagtggacgtctgcaagtcg
agcccttgccgaaatggaggggagtgcgagggctacgggggctcctacctctgcgtgtgc
ccagagggtttctttggctaccactgcgagacagccggcccccccgtcttccccagcccc
tgggggagcagaggctactgcctgcccagcaacggcacccacagctgcacctgcaaagtc
agctacacaggcaagagctgcgaaaaagaattgctgccaccaacctcattaaaggtggaa
agggtggaggacactggtgtgttgatttcttggcacccacctgaggacgcagccgccagg
caactcattgacggctacgccgtgacgtacgtatccctcgacggctcttaccgcaggaca
gattttgtggaccgaagtcgttctgcccaccaattgcgggcactagcctccggcagagcc
tacaatatttctgtcttttcagtcaaacgcaacgtgaacaacaagaatgatatcagcagg
cccgtcatgctcaccacacgcactagaccgcgtccggtggaaggctttgagatcacgaac
gtgacggccagcgccatcacggttcaatgggctctccaccggctcaagcattccaccgtc
agtagggtgcgtgtctccatccgccagccgggcgacctggcagaccgcaccggggagnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
catgtcaccacactgagtggcctggggacggaagaccacccctccgagagcctggccaca
gcccccttccatgtctggacgaggcctctccccccacaaaacctcaccacctcccgcgtc
accgccacctctgtgtccatggcatgggagcagccgcccgcccgcgccgtgggggggtac
atcatcaatgtcaccactgctcagagcgtgaagagccgctacgtgcccaatgggaagctc
gtgtcctataccgtgcgggacctgctccccgggcagcggtaccgcctgtctgtgacagct
gtgcagaacacggagcaaggccaagtgcacagcgagcccatccacctctacgtcaccacc
ttgcagagggatggggctccagagagacggtggagccaagctggacaccctcgcgtcctg
cgcaacaggctgcccccagctttcctgcctgagctccgcttgcttgcggatcacaacaca
gctgaggagccctcgccagcccccag
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