Antrostomus carolinensis (chuck-will's-widow): 104528257
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Entry
104528257 CDS
T08541
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104528257 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acar04121
]
104528257 (TRIP12)
Enzymes [BR:
acar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
104528257 (TRIP12)
Ubiquitin system [BR:
acar04121
]
Ubiquitin ligases (E3)
HECT type E3
104528257 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
HEAT_2
UNC45-central
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
104528257
NCBI-ProteinID:
XP_028941845
LinkDB
All DBs
Position
Unknown
AA seq
1967 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTTEQSKGHFSKRGCSSSAVLIPQQEDPERVNTSEKQKTGQVPKKDNSRGVKRSASPD
YRRTNSPSSAKKPKALQHTETSLETNKPHTKSKRRHLDQEQPKSTQLPSTSKAHTRKGGA
AGSSRSQKRKRTENLSCIKSGSAVESTGAEEKSAKLSKLASKSVTSAKAGCSTITDSSSS
ASTSSSSSAAASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEPSSSKSETS
KPGPSGLQAKLASLRKSTKKRSESPPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGAA
EARRQEKMADPDNNQDGVNSSAARTDETPQGAAASSSVAGAVGMTTSGESESDDSEMGRL
QALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQATDESQQLQAVIEMC
QLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDA
IPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNAL
AIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQ
VASKDLLTNIQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLL
CGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGAI
WQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARA
IQRKPNPLANANTSGHSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVR
HKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPD
IFSVYFRREGVMHQVKNLAESEALLTSPPKVCTNGSGTLGTTTTITTGTATAASNAAADL
GSPSLQHSREDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQ
SPKSSFLASLNPKTWGRLSTQSNSNNIEPARTAGVSGLARAASKDTISNNREKIKGWIKE
QAHKFVERYFSSENMDGSNPALNVLQRLCTATEQLNLQVDGGTECLVEIRSIVSESDVSS
FEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLKRFLHVFFSSPLPGEEPLGRLEPLENAPL
LALVHKMNNCLSQMEQFPVKVHDFPSGNGTGSRGSQALKFFNTHQLKCQLQRHPDCANVK
QWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNV
RHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEERESTDDESNPLGRAGIWTKTHTIWYKP
VREDEDGNKDCVGGKRGRAQTAPTKTSPRNSKKHDELWHDGVCPSVLNPLEVYLVSTPPE
NITFEDPSLDVILLLRVLHAISRYWYYLYDNAICKEIIPTSEFINSKLTAKANRQLQDPL
VIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDS
RVAPRLDRKKRTVNRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQ
ELQRADLGLWRGEEVTLANPKGSQEGTKYIHNLQGLFALPFGRTAKPAHIAKVKMKFRFL
GKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFSIDPVVAKSIYHLEDIVRQKK
RLEQDKTQTKESLQYALEALTMNGCSVEDLGLDFTLPGFPNIELKKGGKDTPVTIHNLEE
YLRLVIFWALNEGVARQFDSFRDGFESVFPLSHLQYFYPEELEQLLCGSKTDTWDAKTLM
ECCRPDHGYTHDSRAVKYLFEILSSFDSEQQRLFLQFVTGSPRLPVG
NT seq
5902 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactactactgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctgttttaataccacaacaagaagatccagaaagagtcaatacttcagaaaagcaaaaa
acggggcaagtgcctaagaaagacaattctcgaggagttaaacgcagtgctagtccagat
tacaggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaacacactgaa
acttccttggaaactaacaagccacatactaaatctaagagaagacacttagaccaagaa
cagccgaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagct
gctggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtataaagagt
ggttcagccgttgaatcaactggcgctgaagagaagtcagcaaaactctccaagctggct
tcaaaatcggtgacctcagccaaagctgggtgtagcaccatcactgattcttcttcttca
gcttccacatcatcctcttcttctgctgctgcctctgcttcttctactgttcctcagggt
gccagagtgaaacagggaaaggaccagaataaggctagacgttcccgttctgcatccagc
cccagtccaaggaggagtagcagggacaaagaaccaagctcttccaagtcagagacatca
aaacctggaccttcaggactgcaggctaagctagcaagtttaagaaaatctacaaagaag
cgcagtgaatcaccacctgctgagctccccagtttgcggcggagcacacggcaaaagacc
acgggctcctgtgctagcaccagtcggcgaggctctggcctgggcaaaagaggagcagct
gaagctcgccgacaggagaagatggctgatcctgacaacaaccaggacggagttaactct
tcagctgcgcgtacagatgagactccccagggagctgcagcttctagttctgttgctgga
gctgtaggtatgacaacctctggagaaagtgagtcagatgattctgagatgggaagacta
caagctctattagaggctaggggtcttcctcctcacctgtttggccctcttggtcctcgg
atgtcgcagctcttccacaggacaattggaagtggagctagttcaaaagcccaacagctt
ttacaaggtctccaagccacagatgaaagtcagcaactacaggcagtgattgagatgtgc
caactgttggtcatgggaaatgaagaaacattaggaggatttccagtcaagagtgttgta
ccagctttgataacactgctgcagatggagcacaactttgacattatgaaccatgcatgc
cgggccttaacgtatatgatggaagcacttcccagatcatctgctgtagtggtagatgca
attcctgtcttcttggaaaagctgcaagttattcagtgcattgatgtggcagagcaggcg
cttacagccttagagatgttatcacgcaggcatagtaaagctattctgcaggcaggtggg
ttggcagactgtttgctgtatctggaattcttcagtataaatgcacagaggaatgcatta
gctattgctgccaactgctgccagagtataacacctgatgagtttcactttgtggcagac
tctttgccactgcttacgcaaaggttaacccatcaggacaaaaaatctgttgaaagcact
tgtctctgttttgcaaggctagtggacaacttccagcatgaggagaacttgctccagcag
gttgcttccaaggacttgttgacaaatatccagcaactcttggtagtgacacctcctatc
ctgagctcaggaatgttcatcatggtggtgcgcatgttttccttaatgtgctccaattgt
cctacgcttgcagtccagcttatgaagcaaaatattgcagaaacgcttcacttcctcctt
tgtggagcctcaaatgggagttgtcaagaacaaattgatcttgttccacgaagtcctcaa
gaactttatgagcttacttctctcatctgtgaactgatgccttgtctgccgaaagaggga
atctttgctgttgatactatgctgaagaaaggaaatgcgcaaaatacagatggtgcaata
tggcagtggcgagatgacaggggtctctggcatccctataacaggattgatagtcgaata
atagaggcggctcatcaggttggtgaggatgagataagcctgtctacacttgggcgtgtc
tatactattgattttaattctatgcagcaaataaatgaggatactggaacagcacgtgcc
attcagcgaaaaccaaaccctttagccaatgcaaacactagtggacattcagaattgaag
aaggatgatgctcgagcacagcttatgaaagaggacccagaactggcaaaatcctttatc
aaaacattgtttggtgttctttatgaagtatatagttcttcagctggacctgctgttaga
cacaagtgccttagagcaattcttaggataatttattttgctgatgctgaacttctgaag
gatgtgctgaaaaaccatgctgtttcaagtcatattgcctccatgctgtcaagtcaagac
cttaagatagtagttggagccctgcagatggcagagattttgatgcaaaagttgcctgac
atttttagtgtttacttcagaagagaaggggtgatgcatcaagtgaaaaacttagcagag
tctgaagctttgctaacgagcccaccgaaagtatgcacgaatggatcgggaacactgggt
accactacaacaataactactggaacagccactgctgccagtaacgcagctgctgatttg
ggctctcccagcttacaacacagccgggaggattctttggatctgagcccacagggacga
ctgagtgatgttctaaagagaaaaagactgccaaaacgagggccaaggagaccaaaatac
tctcctccaagagatgatgacaaagtagacaatcaagctaaaagccctacaactactcaa
tctcctaaatcttccttcttggcaagtttaaatcctaaaacatggggaagattaagcaca
cagtccaatagtaataatattgaaccagcacgaacagcaggagtaagtggtcttgcaagg
gctgcttccaaggataccatttccaataacagagaaaaaattaagggctggattaaggag
caagcccataaattcgtagaacgttattttagttctgaaaacatggatggaagcaatcct
gcactaaatgtattacagagactttgcactgcaacagaacaactcaacctccaggtggat
ggtggaacagagtgccttgtagaaatccgtagcattgtctcggagtctgacgtctcctca
tttgaaatccagcatagtgggtttgttaaacaactgctgctttatttgacatctaaaagt
gagaaagatgctgtaagcagggatatcagattgaaaagatttcttcatgtatttttttct
tctccacttcctggagaagaaccccttggaagattagagccattagaaaatgcacctttg
ttggcattagtccataaaatgaacaattgcctcagtcagatggaacagtttcctgtcaaa
gtgcatgactttcctagtggaaatggaacagggagcagaggatcccaagctttaaaattc
ttcaatacacatcaattaaaatgccaactgcaaagacatccagactgtgctaatgtgaaa
cagtggaaaggtggacctgtgaagattgatcctctggctttggtacaagccattgaaaga
taccttgtggttagaggctatggaagagttagagaagatgatgaggatagtgatgatgat
gggtcagatgaagaaatagatgaatctttggctgctcaattcttaaattcagggaacgtg
agacatagactgcaattttatattggagatcacttgctgccatataatatgactgtgtat
caagcagttaggcagtacagtttgcaagctgaggaggagagggagtctacagatgatgaa
agcaacccattaggaagagctgggatttggacaaaaacacataccatttggtacaaacct
gtgcgagaggatgaagatggtaataaggactgtgttggtggtaaaagaggaagagcgcaa
actgctcccacgaaaacctcccctagaaattctaaaaagcatgatgaattgtggcatgat
ggtgtatgtccttcggtgttaaatcctctagaagtttacctcgtatctactccacctgaa
aacataacatttgaagatccctcattagacgttattcttcttttgagagttttacatgct
atcagtcgatactggtattacttgtatgataatgcaatctgcaaggagataattccaacc
tcagagtttatcaacagtaaactgacagcaaaagcaaacaggcagcttcaggatcctttg
gtaattatgacaggaaacataccaacttggctgacagaacttggaaaaacatgcccattt
ttctttccatttgatacccgccaaatgctgttttatgtaactgcttttgatcgtgatcga
gccatgcaaagactactggatactaatccagaaatcaatcagtcggattctcaggatagc
agagtggcaccacgactggacaggaaaaaacgcactgtgaacagagatgagctgttgaaa
caggcagaatctgtgatgcaggatctaggcagttcaagagccatgttggaaatccagtat
gagaatgaagttggcacaggcctaggccccacgctagagttctatgcacttgtatctcag
gaactacagagagcagacttaggcctttggaggggagaagaagtgactctagccaatcca
aaaggaagccaggaaggtaccaagtacatccataaccttcaaggcctttttgcacttcct
tttggtaggacagccaagccagctcacattgcaaaagttaaaatgaagttccgctttctg
ggaaaactaatggccaaggcaatcatggattttaggctggtggaccttcctcttggactt
cctttttataaatggatgttacgacaggaaacttccctgacgtcacatgacttgttcagt
attgatccagtagtagccaaatcaatatatcaccttgaagatattgtaagacaaaagaaa
agacttgaacaggacaaaacacagaccaaagaaagtctacagtatgcattggaggctctg
actatgaatggctgctctgtggaagatctagggctggacttcacacttcctgggtttcct
aatatagaactgaaaaaagggggaaaagatacaccagtcaccatccacaatttagaggag
tatctcagattggttatattctgggcactaaatgaaggtgttgccagacagtttgactca
ttcagagatggatttgaatcagtcttccccctcagtcatcttcagtacttctatcctgag
gagttggaacagctcttgtgcggcagcaaaacagatacttgggatgcgaagactttgatg
gaatgttgcaggccagatcacggttacacacatgacagtcgagcagtgaagtatctcttt
gaaattctcagtagctttgatagcgagcagcaaagactgtttcttcagttcgtgacaggt
agtcccagactgcctgtaggag
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integrated database retrieval system
