KEGG   Antrostomus carolinensis (chuck-will's-widow): 104528451
Entry
104528451         CDS       T08541                                 
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
acar  Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03015  mRNA surveillance pathway
acar05164  Influenza A
Brite
KEGG Orthology (KO) [BR:acar00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104528451 (CPSF4L)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    104528451 (CPSF4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:acar03021]
    104528451 (CPSF4L)
   03019 Messenger RNA biogenesis [BR:acar03019]
    104528451 (CPSF4L)
Transcription machinery [BR:acar03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     104528451 (CPSF4L)
Messenger RNA biogenesis [BR:acar03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     104528451 (CPSF4L)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_3 zf-CCCH_4 Nab2-like_zf-CCCH_ zf-C3H1
Other DBs
NCBI-GeneID: 104528451
NCBI-ProteinID: XP_010170767
LinkDB
Position
Unknown
AA seq 195 aa
MQELVAGVEKIRFDLEVDVEQQRGAQPLPFLGMDKLGAAVCEFFHRGLCTKGVQCPFQHV
RGEKTVVCKHWLRGLCKEGDGCDFLHEFNVTKMPECYFYSKFGECSNKDCPFLHIDATTS
TMGCPSYDRGFCRHGPLCKYKHTRRVMCDNYLVGFCPEGPKCKFMQYCGQKGHYTNMGLP
FGHNSSANGFFFLQK
NT seq 588 nt   +upstreamnt  +downstreamnt
atgcaggagctggtggctggtgtggagaagatcaggtttgatttggaggttgatgtggag
cagcagcgaggagctcagccactgcccttcctgggtatggacaagctgggagcagccgtc
tgcgagttcttccaccgagggctgtgcaccaagggtgtgcagtgtcccttccagcacgtc
cgtggggagaagacagtggtgtgcaagcactggctgcgtgggctctgcaaggagggcgat
gggtgcgacttcctgcacgagttcaacgtgaccaagatgcccgagtgttatttctactcc
aaattcggtgagtgcagcaacaaggactgtcccttcctgcacattgatgccaccaccagc
accatgggctgtccctcgtatgaccgtggcttctgcaggcacggtcccctgtgcaagtac
aagcacacgaggagggtgatgtgtgacaactacctcgttggcttctgcccagaaggaccc
aagtgcaaattcatgcagtattgcggacagaaaggtcactacaccaacatgggtttgccc
tttgggcacaacagctcagccaatggattcttcttcctccagaaatag

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