Antrostomus carolinensis (chuck-will's-widow): 104528500
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Entry
104528500 CDS
T08541
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2
KO
K12879
THO complex subunit 2
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03013
Nucleocytoplasmic transport
acar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104528500 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
104528500 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104528500 (THOC2)
03041 Spliceosome [BR:
acar03041
]
104528500 (THOC2)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104528500 (THOC2)
Spliceosome [BR:
acar03041
]
Complex C
Other components
EJC/TREX
104528500 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104528500 (THOC2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
Thoc2
THOC2_N
Motif
Other DBs
NCBI-GeneID:
104528500
NCBI-ProteinID:
XP_028941928
LinkDB
All DBs
Position
Unknown
AA seq
1322 aa
AA seq
DB search
LLPGDNAIIEEHKREIVEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLG
LLEALLKIGDWQHAQSIMDQMPPFYATSHKPIAVALCQLVHVTIEPLYRRVGVPKGAKGS
PISSLPNKRAPKQADSFEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEVGTMK
KFVSDRVVKFQSDGSKQEDKEKMEILFSCLLSITDQVLLPSLSLMDCNACMSEELWGMFK
TFPYQYRYRLYGQWKNETYNSHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSH
SNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDT
TISSWLQSLASFCGAVFRKYPIELAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITE
EMTMEQLEAMTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGV
IFQEGGEKHLKLVGKLYDQCHDTLVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDA
AFFLSRPMYAHHISSKYDELKKAEKGNKQQHKVHKYITSCELVMAPVHDAVISLHLPKVW
DDISPQFYATFWSLTMYDLAVPHSSYDREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTA
LQDKLLEEEKKQLEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDA
VYCAHFVELVHQQKTPNFSTLLCYDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRW
HSDRVIYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLE
TGEYTHIRNILIVLTKILPWYPKVLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQL
KGRKPFMIPENEFHHKDPPARNAVAATVQNGPGGAGMPTSLTINTVRLEEGTTEETDKLK
EKSQGVVKVVNKAVNAAPKVTTSNGNSASNSKIIKEDKEKSGKEKDKEKKDKTPAVAPEL
KALGKDGKDKPKEERANKEDKAREIKEKTPKSDKEKEKVKKEEKASKEEKSKTVVTIIES
KSAAEKEREKEPSRERDVAKEMKSKENAKGGEKMPVAGSLKSPVPRSETSESEREQKRRK
VDTHSSPSHSSTVKDNLNELKDSSAKHYINHTTPALSKSKEREVDKKDLDKSRERSRERE
KKDEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEK
NKSKSTGKEKGDSIKAEKMEKSSSGSKKESRHDKEKTEKKEKRDSTGGKEEKKHHKSSDK
HR
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
ctgcttccaggggataatgccatcattgaggaacacaagcgagagatagtggaagctaag
caaattgtcagaaaacttacgatggttgtcttatcctctgaaaagactgaggaaaaggag
aaggaaaaagagaaagaggaggagaaaaccgagaagcctcctgataatcaaaagcttggt
ttattggaagcgttattaaaaatcggtgactggcagcatgcacaaagtattatggatcag
atgcctccattttatgctacttcacacaagcctattgcagttgccctttgccagcttgta
catgtgacaattgaacctctgtaccgcagagttggtgtacctaaaggagctaaagggtca
ccaatttcttctttgccaaacaagagagcaccaaaacaagcagacagctttgaggacttg
agaaaggaagtattcaacatgctttgttaccttggtcctcatctctcccatgatcccatt
ttatttgctaaagtggtgcgccttggaaaagcatttatgaaagaggttggaactatgaag
aaattcgtcagtgacagagtggttaagtttcagtctgatggaagcaaacaagaagataaa
gagaaaatggaaatactgtttagctgtttgttgagtattaccgatcaagtcttacttcca
tctctttctttgatggactgcaatgcgtgcatgtctgaagagttatggggaatgttcaaa
acttttccataccagtaccggtatcgtctttatgggcaatggaagaatgaaacatacaat
agtcacccacttctagtgaaagttaaagctcaaaccatagaccgagccaaatatatcatg
aagcgtttaactaaggaaaatgtgaaaccctctggaagacaaattgggaaactcagccac
agcaatcctacaattttatttgactatattttatcacaaatacaaaagtatgataactta
ataactccggttgttgattcactgaaatacctgacttcattgaactacgatgtcttggca
tactgcatcattgaagctctggcaaaccctgagaaggagagaatgaaacatgatgacact
acaatctcaagctggctgcagagtctggctagcttttgtggtgcagttttccgaaaatac
ccgattgaacttgctggtctacttcaatatgtagccaaccaactgaaagctgggaaaagc
tttgatttgcttattttaaaagaggtagtacagaaaatggcagggatagaaattacagaa
gaaatgacaatggaacaattggaagccatgactggtggagaacaactgaaagctgagggt
ggatactttggtcaaatcaggaatacaaaaaaatcttctcagagactgaaagatgcatta
ttggaccatgaccttgcccttccactgtgcctgcttatggctcaacagagaaatggtgtg
atctttcaagagggaggggaaaaacatctgaagctggtgggaaaactgtatgatcagtgc
catgacaccctggtgcagtttggtgggtttttagcatccaatctaagcacagaagattac
attaagcgagtgccttctattgacgttctctgtaatgagtttcacacccctcacgatgct
gcgtttttcctctcaagacccatgtatgcacaccacatttcatcaaagtatgatgaactg
aaaaaagctgagaagggaaataaacagcagcacaaagttcacaagtacatcacatcatgt
gagctggtgatggctcctgttcatgatgctgtgatttctctgcaccttcccaaggtttgg
gatgacatcagtcctcagttttatgctacgttctggtctttgacaatgtatgaccttgcc
gtcccacatagtagctatgacagagaagtcaataaacttaaagtccagatgaaagccata
gacgacaatcaggaaatgcctccaaataaaaagaaaaaagaaaaagaacgttgcacagct
cttcaggacaagctccttgaagaggagaagaagcaattggagcatgtgcagagggttcta
caaagactgaagctagagaaggataactggcttttggcaaagtctaccaaaaatgagact
atcacaaagtttttgcagttatgtatatttcctcgatgcattttttcggcaatcgatgca
gtttattgtgctcactttgtagaactggtgcatcagcagaaaacacccaacttctctaca
cttctctgctatgacagagttttctctgatattatatatacagttgcaagttgcactgaa
aatgaagctagtagatatggcaggtttttgtgctgtatgctggagactgtgactagatgg
cacagtgacagagtcatatatgaaaaggaatgtggcaactatccaggcttcctaactata
ttgcgggcaactggatttgatggtggaaataaggctgatcaattggattatgagaatttt
agacatgtggtacacaaatggcactataaattaactaaggcttctgtacactgccttgaa
acaggtgaatatacacatatcagaaatatcctgattgtgctgaccaaaatccttccgtgg
tatccaaaagtgctgaacctgggacaagccttggaaagaagagtacataagatatgtcag
gaagagaaagagaagagacctgatctatatgcattggctatgggctattctgggcagttg
aaaggtaggaagcctttcatgatacctgaaaatgaattccaccacaaagacccacctgcc
aggaatgctgtagctgcaacagtacaaaatgggccaggtggtgctgggatgcctacatct
ctcacaataaatacagttagactggaagaaggcactactgaggagactgataaattaaag
gagaagtctcagggtgtggtgaaagttgttaataaagctgtcaatgctgcaccaaaggtg
acaacaagtaatggaaacagtgcttctaatagcaaaattattaaagaggataaagaaaaa
agtgggaaggagaaagataaagaaaaaaaagacaagactccagctgttgctccagagttg
aaggcacttgggaaggatgggaaagataaaccaaaggaagaacgggcaaacaaagaagat
aaagcaagggagatcaaggagaaaacgccaaaatccgacaaagagaaggaaaaagtcaag
aaagaagaaaaagcttcgaaagaagaaaaatccaagacagttgttaccatcattgaatca
aagtcagctgcagaaaaggagagagaaaaggagccatctagagaaagagatgtagcaaag
gaaatgaaatccaaggaaaatgctaaaggaggagaaaagatgccagtagctgggtccttg
aagtcacctgttccccgatcagaaacatcagaatctgaaagggaacaaaaacgccgcaaa
gttgatacacattcttctccatcacattcctcaacagtaaaggacaacctcaacgaactc
aaggactcttcagcaaagcactacattaaccacactactccagcactgtccaagagtaag
gagagagaagtggacaagaaagatttggacaagtcaagggaaagatccagagagagagag
aagaaagatgaaaaggacaggaaggatcgaaaaagggatcattcaaacagtgacagagag
gttccacaggattcaaccaaacgacgcaaggaggaaaatgggacaactggttcttcaaag
catagtaaaagtgaaagtccttctgattcccctcgcttaaatgaaaaggagaaggagaaa
aacaaatcaaaatctacaggaaaagagaaaggtgactcaattaaagcagaaaagatggag
aagagctcttctggtagcaaaaaggaatcgagacatgataaagaaaaaaccgaaaagaaa
gaaaaaagagacagcactggagggaaagaagaaaagaaacatcataaatcttcagacaag
catagataa
DBGET
integrated database retrieval system
