Antrostomus carolinensis (chuck-will's-widow): 104528567
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Entry
104528567 CDS
T08541
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C
KO
K20163
DENN domain-containing protein 4
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acar04131
]
104528567 (DENND4C)
Membrane trafficking [BR:
acar04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
104528567 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
PPR_2
uDENN
PPR_3
PPR_long
PPR
RRM_Thc1
Motif
Other DBs
NCBI-GeneID:
104528567
NCBI-ProteinID:
XP_010170915
LinkDB
All DBs
Position
Unknown
AA seq
1667 aa
AA seq
DB search
MGATIECWDPQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQLQLGLLT
AVERKVVTSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHN
IPFPSPQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLE
GKILLHSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLATVLSAPLPFIVGVDSRYF
DLYDPPQDIVCIDLDTNMVYISDDKKSTNWKQFPKKPCKSLLSTLKKLHPQLAAVHRKTQ
EGSAVEMTPIEADFSWQKKMIELEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKATAA
DSLFDHQGFLKSRDRAYTKFYTHLTKTQIFSRFIEECSFVSDKDTGLAFFDDCIEKLFPD
KGTEKGEKVDVESVEDTRLIELDESQKSEHTVFIMPPEPPADDGQDRVPKYSYKNFPRLD
FKLFDRPQEIKLSFSRHPAGSSISNSPALMAKRTKQEIKTAHKLAKKYYVSPPQWAKCLF
SHSYSLWFICLPAYIRVAHPKVKALQQAYDVLIKMRKTEVEPLDEVCYRVVMQLCGLWGQ
PVQAVRVLFEMKNAGIQPNAITYGYYNKAVLESPWPSSNRSGVFLWTKVRNVVRGTAQFR
QCLKKSTQSPRVPVISGGQSDQGYGSKDELLRDDGDPLHATETQAEKDISSKAEDLIGEV
CTEKSDEKQQLNIETYSPTDPPAWGNSIVKVPSGIFDSSGRKSSGETVSGPLFITQDSVE
DVVFGDVSPKKTSEKGQKRQKLFSERSCSFSSESRAGMLLKKGSLDVHSKEIAIMMGADA
KILTAALSGAKTSPCHMNKSHSFESIVDQQVSGISGTWSCVTESDWELEHRSSPVLEEPG
EGQEPLENGRDESMTTVEGMNLEQSAESTNQKPESKDATTKRNSFYGVLKPIEREDVEVG
LDPLSLLATDDMQPRHPEPEEKLVSPVAARNLADEIESYMNLKNPLGSKFPSMELHKSDR
EAEVSGTLGHSQERRSSLPLDPILPSPKSYENRRSPSVSRSKTFTGRPKQQTHPRVQKER
SSSLTGLGRSSPHGSLGSVVTTLSSLKLDNILSGPKMDVLKSGMKQAANVASKMWGVVTS
AYSYSDDEEENNRPDFNFPAGFEDNILGDNLSSRTEVPGLITNELAQSTTSLGSSSSSGD
AGRQHYSAGEVSFPRSMKVLDSEKSEHSSSHNTSLSSIFQNYAMEVLMSSCSQCRACGAL
VYDEEIMAGWTADDSNLNTTCPFCKSTFLPLLNVEFKDLRGSASFFLKQSTSGDSFQSGT
LPLTTDPLEKKLWSSPAVADLISFSDHPQSSHTIAEESSSAAEQSDVTEEQSKDPRTMKT
SANNPPKRGVSLTRSHSVGGPLQNIDLSQRPSHGISTVSLPNSLQEVVDPLIKRTNPLPV
SVPYLSPLVLRKELESLLENEGEQVIHTSKFINQHPIIFWNLVWYFRRLDLPSNLPGLIL
TSEHCNDGVQLPLTSLAQDSKLVYVHLLWDNINLHQEPGEPLYISWRNLNSSEKRLSTVT
EDQQATNALLENIKLSIQHNNVVKPIHLLLQKVKPDVKRQRSFYREILFLSLVSLGRENI
DIEVFDSEYRLAHKNLPKDVLEKMQKIDAPPSSRVECCRKCFGAPLI
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgggagctactattgagtgctgggaccctcaaactaaatatccactaccagtgttctca
acttttgtactgacgtgctcttctgcagaaaaggtttatggtgctgctattcagttttat
gagccttatccccgggagctgctaacagaaaaacaacaattgcagctgggtctcctaaca
gctgtagagaggaaagtggttacttccaagtctatcaattccaacaaatgcatctgcctt
ctctcacactggcctttctttgaagcatttcgaaaatttcttatgttcatctacaaactc
tctgtatctgggcctcatcctcttcccattgagaagcacatatcacattttatgcacaac
atacctttcccttcaccacaaaggccaaggattcttgtgcagctttctgcccatgatgca
ttaatattgtctcagccagtttctacaccattgccattaagtggagcaaactttagcaca
ctgctcatgaatcttggaccggaaaactgtgccactctgttactctttgtattactggaa
ggcaagattctcctccattctcttagaccagctgtgttgacaggagttgctgaagctgta
gtagctatgatatttccatttcagtggcaatgtccgtatatccccctttgtcctttgtct
ctggccaccgtactcagtgcacctcttccatttattgttggagttgattcacgatacttt
gatctgtacgatccaccacaggatattgtgtgcattgacttagacacaaacatggtgtac
atatcagatgataagaagagcaccaactggaagcagtttcctaagaagccgtgtaaaagt
ttgctcagcaccttaaagaaactgcacccacagctggcagcagttcacaggaaaactcag
gaaggctctgcagtggagatgactcctattgaggcagatttctcctggcagaagaagatg
atagaactcgagatggagatccaggaggcttttctccgtttcatggcatctattttaaag
ggttacagaacattcctcaagccaatcacgcaggcgccttcaaataaagcaactgctgct
gattccttgtttgatcatcaaggatttttaaaaagcagagatcgtgcctatacaaagttc
tacacccatctcaccaagacgcagatattcagccgctttattgaagagtgcagttttgtg
agtgacaaggatactggcttggcattttttgatgactgcatagaaaagctctttccggat
aaaggaacagaaaaaggagagaaggttgatgtagaatctgtcgaagatacacggttaatt
gagcttgatgagtcacaaaaaagtgaacacacagtgttcataatgccaccagaacctcct
gctgatgatggacaagatcgagtgccaaaatacagctataaaaacttcccacgactagat
ttcaagctctttgacaggccacaggagatcaagctctccttcagcagacacccagctgga
agcagcatttcaaatagtccagcactcatggcaaagaggacaaaacaggagataaaaaca
gcccataaattagcaaagaagtattacgtaagccccccacaatgggctaagtgtctcttc
agtcatagttacagcctatggtttatttgtctgccagcctacatcagagttgcacatccc
aaggtcaaagcactgcaacaggcatatgatgttttaattaaaatgaggaaaactgaagtg
gaaccactagatgaggtctgctacagggttgtaatgcagctctgtggactgtggggtcag
cctgtgcaggccgtgagagtcctctttgaaatgaaaaatgccggaatacagccaaatgcc
atcacatatggttattacaataaggcagttttagagtctccttggcctagcagtaaccgc
agtggcgtattcctgtggacaaaggtacgaaatgtagttcgtggcacagcgcaatttagg
cagtgcttaaagaaatcaacacagagcccacgagtacctgtgatatcaggtggtcagtca
gaccagggctacggatccaaggatgaacttttaagagatgatggggatcctcttcatgca
actgaaacacaagcagagaaagatatttcttctaaagctgaagacctaataggagaggtt
tgtactgagaaatctgatgagaagcaacagctgaatatagaaacttacagtccaacagac
ccacctgcttggggtaacagtattgtgaaagttccctctggcatttttgatagcagtggg
aggaaaagcagtggtgaaactgtttctggcccactgttcataactcaggattcagttgaa
gatgtagtctttggtgatgtttctcctaagaaaacaagtgaaaaaggacagaagaggcag
aaactattttcagagagaagctgcagtttcagcagtgaaagcagagccggaatgctgctg
aaaaaaggcagcttggacgtgcattctaaagaaatagcaattatgatgggagcagatgcc
aagatcctaacagcagctttgtctggggccaaaacttcaccctgtcatatgaataaatcc
cacagttttgaaagtatcgttgatcagcaggtttctggcataagtggtacttggagttgt
gtgactgagagtgactgggaattggagcataggtcttcaccagtgctggaagaacctggg
gaaggacaggagcctcttgagaatggaagagatgaaagcatgaccacagtggaaggcatg
aaccttgaacagtcagctgagtctacaaaccagaaaccagaatccaaagatgcaactact
aaaaggaatagcttttatggagtgcttaagcctattgaaagggaagatgttgaagtaggc
ttggaccctctatctttgctggctactgacgacatgcaaccaaggcatccagaacctgag
gaaaagttggtgtcgccagttgcagcgcgtaatttggcagatgaaatagagagctatatg
aatctaaagaacccattaggtagtaagtttcctagcatggaactgcacaagtcagacagg
gaagcagaagtgtctggtacacttggtcactcccaagaaaggaggtcaagcctccctttg
gatcccatcctgccatcccccaagtcttatgaaaatcggagaagtccttctgtctccaga
tccaaaacattcactggacgacctaagcaacaaacccatccacgagttcaaaaggagcgg
tcttcatctttgacaggactgggtcgttcttctccacatggctcattaggatctgtcgta
acaactttatccagcctgaagttagacaatatactgtctggaccaaaaatggatgttctg
aaatcgggcatgaagcaggctgccaatgtggccagtaagatgtggggagttgtcacttca
gcatatagttactcagatgatgaggaagaaaacaatcgacctgactttaactttcctgct
ggttttgaagataacattttaggagataatctgtcatcaagaactgaagtcccagggcta
attacaaatgagcttgcacaaagcactactagtcttggcagtagcagtagcagtggagat
gcaggaagacaacattacagtgcaggtgaagtttcatttccaagaagtatgaaagttcta
gattctgagaagtcagagcacagctcttcacataacactagtttatccagcattttccaa
aactatgcaatggaggtactgatgtcaagctgctctcagtgtagagcttgtggtgcactg
gtttatgatgaggagattatggctggttggacggcagatgattcaaacttgaacactacc
tgtcctttctgtaaaagtaccttcttacctttacttaatgttgaatttaaagacctacgt
ggctctgcaagctttttcctgaagcaaagtacctcaggagatagttttcagagtggtacc
cttcctttaaccacggatcccttggagaagaaactgtggtccagtccagctgttgctgac
ttgatcagtttttcagatcacccacagtccagccataccatagctgaagaaagtagctct
gcagctgagcagagtgatgtgacagaagaacagagtaaagatcccagaaccatgaagaca
tctgccaataatccaccaaaaaggggagtgtccttgactcgaagccacagtgttggcggg
ccactgcaaaacattgatctttcccagagaccatctcatggcatttcaacagttagtctg
ccaaatagtttgcaagaagttgtggatcctttaataaaaagaactaaccctctccctgta
tctgtaccctacttgagccctttggtactgcgtaaggaacttgaatcactgttggaaaat
gagggagagcaagtaattcatacatccaaattcatcaatcaacaccccataattttctgg
aacctagtttggtatttccgacggttggatctacctagcaacttacctggactcattcta
acatctgaacactgtaatgatggagtgcagcttcctttgacgtctcttgctcaagatagc
aagctagtatacgtccatcttctctgggacaatatcaacctccaccaagagccgggggag
cccctatatatatcttggagaaatctcaattcttctgaaaagagactctccacagtgaca
gaagatcagcaggcaacaaacgctttgttggagaacatcaaactaagtattcaacataat
aacgttgttaaaccaatccacctccttctacagaaagttaagccagatgtgaaacgacag
aggagtttttacagagagattctttttctgtctctggtgtctcttggaagagagaacatt
gacattgaggtctttgatagtgaatacagacttgcacataaaaatctaccaaaggatgtt
cttgaaaagatgcagaaaatagatgctccaccaagcagcagagttgagtgttgcaggaag
tgctttggagcacctttaatataa
DBGET
integrated database retrieval system
