Antrostomus carolinensis (chuck-will's-widow): 104528700
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Entry
104528700 CDS
T08541
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104528700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acar02000
]
104528700
Transporters [BR:
acar02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104528700
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104528700
NCBI-ProteinID:
XP_028941986
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MAEQPCPAPTASPPWHGTAPHPGPPGPQTHPRDKWSKKVDFLLSVIGFAVDLGNVWRFPY
ICYQNGGGAFLIPYTLMAVFGGVPLFYMELALGQFHRTGAIPIWKRICPIFKGIGFAICI
IALYVSFYYNTIIAWALYYFYSSFSDTLPWTSCDNPWNTPNCTNYFGKRNVTWTNFSRSP
AEEFYTRKVLEIQKSGGLYNVGGIRWQLLLCLFLIFTIVYFSLWKGVKTSGKVVWVTATL
PYIVLFILLIRGATLPGAWRGVVFYLRPDWSKLLSTAVWVDAAAQIFFSLGPGFGVLLAL
ASYNHFHNNCYRDALVTSAVNCLTSFLSGFVIFTVLGYMAEMRDVEVEDVARDKGPCLLF
IASPEAIANMVGSTFFAIIFFLMMITLGLDSTFGGLEAVITAVMDEYPQVLAGRREFFVL
GLITVCFLGSLSTLTYGGAYVVRLLEEFGAGCSILAVVLLETIAVSWFYGIQRFSHDVKA
MLGFTPGVFWKVCWVAISPALLAFIVISSLLDQPPLTLFDYQYPEWSIWVGYLIGASSFI
CIPIYMVYKLVWTPGSLKQRLAVCIRPEKSTRDPQADTVSLSPAL
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagccctgcccagcacccaccgccagccctccctggcatggcacagccccc
cacccgggacccccgggaccccaaacccaccccagggacaaatggagcaaaaaagtggat
ttcctcctctcagtcatcggatttgctgtggatctgggcaacgtctggcggttcccttac
atctgctaccaaaacggagggggagcctttctcatcccgtacacgctgatggcagttttc
ggaggggttcccctcttctacatggagctggccctggggcagttccacaggacaggtgcc
atccccatctggaagcgcatatgccccatctttaaaggcatcggctttgccatttgcatc
attgccctgtacgtctccttctactacaacaccatcatcgcctgggctctctattatttc
tactcatccttctcggacaccctgccctggacgagctgtgacaacccctggaacacaccc
aactgcaccaactacttcgggaagaggaacgtgacctggaccaacttctccaggtcccct
gccgaagagttttatacgaggaaggtcctggagatccagaagtccggaggtctgtacaat
gtgggggggatccgctggcagctgctcctctgcctcttcctcatcttcaccatcgtctac
ttcagcctgtggaaaggagtgaaaacctccggcaaggtggtgtgggtgacagccacgctg
ccctacattgtcctcttcatcctgctgatccgaggggccaccctgcccggcgcctggaga
ggggtcgtcttctacctgcgcccagactggagcaagctgctgagcaccgcggtttgggtt
gatgctgctgcgcagattttcttctccttgggccctggatttggtgtcctcctcgctctg
gccagttacaaccatttccacaacaactgctaccgggatgcgctggtcaccagcgcagtg
aactgcctcaccagcttcctctcgggcttcgtcatcttcaccgtgctgggctacatggcc
gagatgagggatgtggaggtggaggatgtcgcaagagataaagggccgtgcctcctgttt
atcgcctcccccgaagccatcgccaacatggtgggatccactttctttgccatcatattc
ttcctgatgatgatcacgctggggctggacagcacgtttgggggtttggaggccgtgatc
acggccgtgatggacgagtacccccaggtcctggctgggcgacgggagttcttcgtcctt
ggcctcatcacagtctgtttcctgggctccctgagcaccctcacctacgggggagcctac
gtggtgaggctgctggaggagttcggtgctggctgctccatcctggcagtggtgctgctg
gaaacaatagctgtctcctggttttatgggatacagaggttctcccacgacgtgaaagcc
atgctgggcttcaccccgggggtgttctggaaggtgtgctgggtcgccatcagccctgcc
ttgttggcgttcatagttatcagctccctcctggaccagccgcctctgacactctttgat
taccagtaccctgagtggagcatctgggtggggtacctcatcggagcatcgtccttcatc
tgcatccccatctacatggtgtacaagctcgtctggacgccggggtctctcaagcagcgc
ctcgctgtctgcattcggccggagaaatcaacccgagaccctcaagcagacacagtgtcc
ctgtcacctgccctgtag
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