Antrostomus carolinensis (chuck-will's-widow): 104528860
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Entry
104528860 CDS
T08541
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04517
IgSF CAM signaling
acar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
104528860 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104528860 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
acar04812
]
104528860 (SPTBN1)
Cytoskeleton proteins [BR:
acar04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
104528860 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
104528860 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
SCAR_helical
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
104528860
NCBI-ProteinID:
XP_028942055
LinkDB
All DBs
Position
Unknown
AA seq
1854 aa
AA seq
DB search
MLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLT
LGLIWTIILRFQIQDISVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGM
AFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSI
ITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILN
NRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREG
KLISDINKAWERLEKAEHERELALRNELIRQEKLEQLARRFDRKAAMRETWLSENQRLVS
QDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAVVAVAKELETENYHDIKRITARKDNV
IRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYIMDWMDEMKVLLLSQDYGKHLLGVEDL
LQKHALVEADIAIQAERVRGVNASAQKFATDGEGYKPCDPQVIRDRVAHMEFCYQELCQL
AAERRARLEESRRLWKFFWEMAEEEGWIREKEQILSSDDYGKDLTSVVRLLSKHKAFEDE
MSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIKDIREQWANLEQLSAIRKKRLEEASLL
HQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQSLVKKHKDVAEEIASYRPTIDSLHEQ
AKALPQEHAGSPDVQGRLSGIEERYKEVAELTRLRKQALQDTLALYKMFSEADACELWID
EKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNNQASRVAVVNQIARQLMHSGHPSEKEI
KAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYHLECNETKSWIREKTKVIESTQDLGN
DLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEKLESEHPDQAQAILSRLAEINDVWEE
MKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLTEAEKLLTQHEN
IKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLS
QSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEEKIN
AVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNREAASELLMRLKDNRDLQKFLQDCQE
LSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMAELASNKEWLEKIEKEGMQLIAEKPE
TEAVVKEKLTGLHQMWEELESTTQTKAQRLFDANKAELFTQSCADLDKWLNGLESQIQSD
DYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQSQARALSQEGKSTDEVDGKRLTVEKK
FLELLEPLNERKANLLASKEIHQFNRDVEDEILWVGERMPIATSTDHGHNLQTVQLLIKK
NQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEAIQQRLADLQQLWNLLIEETEKRHKR
LEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEQSAVSMLKKHQILEQAVEDYAET
VHQLSKTSRTLVADNHPESERISMRQSKVDKLYAGLKDLAEERRGKLDERHRLFQLNREV
DDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHMADELIN
SGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEILGRIQDKHKK
LPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKREN
EVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPR
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcaaacttttggaagttctttcaggagagagacttcctaaaccaactaaggga
aggatgcgcatccattgcctggagaatgttgataaagccctccagttcctgaaagagcaa
agagtacacttagaaaacatgggatctcatgatattgtggatgggaatcacaggctgaca
cttggccttatttggactattatcctgaggttccagatccaagatatcagtgttgaaact
gaggacaacaaggagaagaaatctgctaaagatgctttgcttttgtggtgccagatgaag
acagctggttaccccaatgtcaacattcacaactttacaacaagctggagggacggaatg
gctttcaatgcactaatacataagcacaggcctgatctgattgattttgacaagctgaag
aaatcaaatgcacactacaatctgcagaatgcttttaaccttgcagagcaacaccttggt
cttactaagctcctggaccctgaggatatcagcgttgatcatcctgatgaaaagtcaatc
atcacctatgtggtgacgtattaccactacttctccaagatgaaagctttagctgttgaa
ggaaaacgtatcggaaaggtgcttgacaatgccattgaaacggagaaaatgattgaaaaa
tacgaatctctggcttctgaccttcttgagtggattgagcaaaccattatcatcctcaac
aatcgcaaatttgccaattccctagttggtgtgcaacaacagctgcaggcattcaacact
taccgcacagtagagaaaccacccaaatttacagaaaaaggaaacctagaagtgctgctt
tttaccatccaaagcaaaatgagagccaacaatcagaaagtatacatgccaagggagggc
aaactcatctctgacattaacaaggcctgggaaagactggaaaaagctgaacatgaaaga
gaactggcactgcgaaatgagctcatcagacaagagaaactggaacaactcgcacgcaga
tttgatcgcaaggcagctatgagagaaacttggctgagtgaaaatcaacgtcttgtttct
caggataattttggctttgaccttccagcagtagaggctgcaacaaagaagcatgaggcc
attgagacagacattgcagcatatgaagaacgagtccaggccgtggttgcggtagcaaag
gagcttgagactgaaaattaccatgatatcaaacgcattactgcgagaaaggacaacgtt
atacgcctatgggagtatctcctagagctgctcagagcacggagacagagactggagatg
aatcttggtctgcagaagattttccaggaaatgctgtacattatggactggatggatgag
atgaaggtgcttctgctgtctcaagactatggcaaacatttgttaggagttgaagacctg
ttgcagaaacatgctcttgtggaagctgacattgctattcaggctgagagagtgagaggg
gtcaatgcatctgctcagaagtttgccactgatggagaaggttacaagccgtgtgaccca
caggttatcagggaccgcgtcgctcacatggagttctgttaccaagaactgtgtcagctc
gcagctgagcgcagggcccgcttggaggagtcccggcgcctctggaaattcttctgggaa
atggctgaagaagagggttggatcagggagaaggaacagatcctgtcatctgatgactat
gggaaggacctaaccagtgtcgtccgtctcttgagtaagcataaggcgtttgaagacgaa
atgagtggtcgtagcggccactttcagcaggcgataaaagaaggtgaagacatgattgcg
gaggagcattttgggtctgagaaaatcagagaaagaattaaggatatcagggagcagtgg
gctaacttggaacagttatctgccattaggaagaagcgtctggaggaagcctctctcctt
caccagttccaggctgacgctgatgacattgatgcatggatgttggacatcctcaaaatt
gtctccagcaacgatgttggccacgatgagtattccactcagtccttggtcaagaaacac
aaagatgtggctgaagagatagcaagctaccgaccaaccattgactcgcttcatgaacaa
gcaaaggctctgccgcaggaacatgccggatctccggatgtgcaaggcagattgtctgga
atagaggaaagatacaaagaggttgctgagctgactcggctgcgtaaacaggccctgcag
gatacccttgctctttataagatgttcagtgaggcagatgcttgtgagctttggattgac
gaaaaggagaagtggctgaataatatgcagattccagagaagctggaggacctggaagtg
atccagcacagatttgaaagcttagaaccagaaatgaacaatcaggcatcccgtgttgca
gtagtgaaccaaattgctagacagctgatgcacagcggccatccaagtgagaaggagatc
aaagcacagcaagataaactcaacacaagatggagccagttccgagaactggtagacagg
aagaaggatgctctgctctctgctctgagtatccagaactaccatcttgaatgtaatgaa
accaaatcctggatcagggaaaagaccaaagtgatcgaatccacacaagatctgggtaac
gatctggctggagtgatggccctgcagaggaagctgacgggcatggaacgtgacctggta
gctattgaagccaagctaagcgacctgcaaaaagaggcagaaaagttggaatcagagcat
cctgaccaggcacaggctatcctttcacggctggcagaaatcaatgatgtgtgggaagaa
atgaagaccacactcaagaaccgggaagagtcccttggagaggcaagcaaactgcagcag
ttcttgagagatctggatgacttccagtcttggctatccagaacgcagacagcaattgca
tccgaagatatgccaaacacactgacagaggctgagaagctgcttactcaacatgagaat
attaagaatgaaatcaacaattatgaggaagattatcagaaaatgagggacatgggtgag
atggtgacacaagggcaaactgatgctcagtacatgttcttacgccagcgcctacaagct
ttggacactggatggaatgagcttcacaaaatgtgggagaacaggcaaaatctcctttcc
cagtctcatgcctatcagctatttctcagagataccaagcaagcagaagcatttcttaat
aaccaggagtatgttttggcgcacacggaaatgcccactaccttggaaggagctgaagct
gctattaaaaaacaggaggatttcatgaccacgatggatgccaatgaagaaaagatcaat
gcagttgtagagactggcaggaggctagtcagtgatgggaacattaactctgataaaatc
caggagaaagtggactctattgatgacagacataggaagaaccgtgaagcagccagtgaa
cttctgatgaggctgaaagataacagggatcttcaaaagtttcttcaggattgtcaagag
ctctcactctggatcaatgaaaagatgctcacggctcaggatatgtcctatgatgaggca
aggaacttgcatagcaaatggctgaagcatcaggcatttatggcagaacttgcatccaac
aaagaatggctggagaagattgaaaaggagggaatgcagctcattgcagagaaaccagaa
actgaagccgtagtgaaagaaaagctgaccggtctccatcaaatgtgggaagagcttgaa
tccactacccagaccaaggctcagcgtctctttgatgcaaacaaggcggagctttttacc
cagagctgcgctgatttggataagtggctgaatggtttggagagtcaaattcagtcggac
gactatggaaaagatctcaccagtgtcaacatcctgttgaagaagcagcagatgctagaa
aatcaaatggatgttcgtaagaaggagatagaggagctgcaaagccaggcaagggcttta
agccaagaagggaagagtacagatgaagtagatggcaaacgccttactgtagaaaagaaa
tttttggaattattggaacctttgaatgaaagaaaggcaaacctgctggcctccaaagag
atccaccagttcaaccgggatgtggaagatgaaattttatgggtcggagagaggatgcct
atagctacatctactgatcatggacacaacctccagactgtgcagctactaataaagaaa
aatcagactcttcaaaaagaaatccagggacatcagcctcgtattgatgacatttttgag
aggagtcaaaacattatcacagagagtagccctaatgctgaagcaattcagcagagactt
gcagacttgcagcagctgtggaacctcctaatcgaggagacagagaaacgccacaagcgc
ctagaggagtctcacagagcacagcagtattactttgatgctgccgaggctgaggcctgg
atgagcgagcaggagctctacatgatgtcagaagagaaagccaaggatgaacagagtgcc
gtgtccatgctgaagaaacaccagattttggaacaagctgtagaagactatgctgaaact
gttcaccagctttcaaagaccagcagaactttggtggcagataatcacccagaaagtgag
cgtatcagcatgcgccagtccaaagtggataagctgtatgcaggcctgaaagatctagct
gaagagagacggggaaagttggatgagagacacaggctgttccagcttaaccgcgaggtg
gatgacctggagcagtggattgctgaaagggaggtggtggcaggttcccatgagctggga
caggattacgaacacgtaacgatgctacaggagcgattccgagaatttgcccgagacact
ggaaacattggacaggagcgtgtcgatactgttaaccacatggcagatgagctcatcaac
tctggacattcagatgctgcgacaattgcagagtggaaggacggactcaatgaggcctgg
gctgatctcctggagctcattgacacgagaacacaaattctagcagcctcttatgaactg
cacaaattttaccatgatgccaaggagatcttaggacgtattcaagacaaacataagaaa
ctgcctgaagagcttggtagagaccaaaacacagtggaaacactacagagaatgcacaca
acatttgagcatgatatccaggccctcggcacccaggtgagacagctgcaggaggatgct
gcacgccttcaggctgcctatgctggagacaaagctgatgacatccagaagagggaaaat
gaagtcctagaggcatggaaatcactgttggacgcctgcgagggccgcagggttagactg
gtggatacaggagacaaattccgtttcttcagcatggttcgtgatctcatgctttggatg
gaagatgttattcgacagatagaagcccaagaaaagccaaggtaa
DBGET
integrated database retrieval system
