Antrostomus carolinensis (chuck-will's-widow): 104528944
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Entry
104528944 CDS
T08541
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03020
RNA polymerase
acar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104528944 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
104528944 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acar03021
]
104528944 (POLR2B)
03400 DNA repair and recombination proteins [BR:
acar03400
]
104528944 (POLR2B)
Enzymes [BR:
acar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104528944 (POLR2B)
Transcription machinery [BR:
acar03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104528944 (POLR2B)
DNA repair and recombination proteins [BR:
acar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104528944 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
104528944
NCBI-ProteinID:
XP_010171404
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDL
QAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVD
ITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFII
NGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGA
KKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDE
AFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGY
MVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGK
DFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNS
PIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEE
WSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDI
REREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDT
LEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSA
MGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTG
YNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGMRHAIYDK
LDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSETGIVDQV
MVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIII
NPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEV
LYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFG
EMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRSAYHKPFEI
SFQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgatgaggacgatgatgaaatcacccccgacttgtggcaggaagcctgctgg
atcgtcattagctcctattttgatgagaagggtttagtcaggcagcagctggattctttt
gatgagtttattcagatgtctgtgcagagaattgttgaagacgctccaccgattgattta
caagctgaagcccagcacgccacaggagaagtggaagagccgccccggtatctgttgaag
tttgaacaaatctatctttccaaacctacacattgggaaagagatggagcaccctcacct
atgatgcccaatgaagccagactgagaaaccttacgtattcagcccccttgtatgtggat
ataactaaaacagttattaaagaaggagaggatcagttacagacacagcatcagaagact
tttataggaaaaattcctattatgttacgttctacgtactgtttgttgaatggcttaact
gaccgtgatctctgtgaactgaatgagtgcccgcttgatcccggtggctactttatcatt
aatggatcagaaaaggttctgattgctcaagagaaaatggctacaaacacagtgtatgtg
tttgcaaagaaagattcaaaatatgcctacacaggagagtgtagatcctgtctggaaaat
tcctctcgaccaacgagtactatctgggttagcatgctggccagaggcggacagggtgcg
aagaagagtgccatcggtcagcgcattgtagcaactttgccatatatcaaacaagaagtc
cccatcataattgtctttcgtgcactaggctttgtgtctgacagggacattttggagcac
atcatatatgattttgaagatccagaaatgatggaaatggtcaaaccttctctggatgaa
gcgtttgtcattcaggagcaaaacgttgctctaaacttcattggatcaagaggtgcaaag
ccaggtgtcaccaaagaaaagagaatcaagtacgctaaagaagtcttgcagaaagaaatg
ctcccgcatgttggtgtcagtgacttctgtgaaaccaaaaaggcctattttctagggtat
atggttcacagattgttgctggcagcactgggaagaagagagctcgatgacagagatcat
tatggcaacaaaagactggatcttgctgggcccctgttagctttcctgttcagaggaatg
tttaagaatttgctgaaggaagtgagaatatatgcacaaaagtttattgacagagggaaa
gatttcaacctggaactggcaattaaaacaagaattatttcagatggtttgaagtattca
ttggcaactggaaactggggtgaccagaagaaagctcatcaggccagagcaggagtatct
caggtgttaaaccgcctgacttttgcatcgacgctttcccatctgaggcgcctgaattct
ccaatcggtagagatggcaaactagcaaagcccaggcagctgcacaacacgctgtgggga
atggtttgccctgctgagactcctgagggtcatgcagtaggacttgtgaagaacttagcc
ctgatggcttacatttctgtggggtctcagccatccccaattttggaattcttggaagag
tggagtatggaaaacctggaagaaatatctccagcagcaatagccgatgctaccaagatc
tttgttaatggctgctgggtggggatacacaaagatccagagcagctcatgaacacccta
aggaagctccgtcgtcagatggacatcattgtgtcggaggtctcaatgattagggatatt
cgtgagcgagaaatccgcatctatactgatgcaggcagaatttgtcgaccccttttaatt
gtggaaaaacagaagttgctgttgaagaaaaggcacattgaccaactgaaggaacgagag
tataacaattacagttggcaggaccttgtggccagtggtgtagtagagtacattgataca
ctggaagaagagactgtgatgctggcaatgactccagatgacttgcaagagaaaggtgtg
gcatattgttcaacatacacgcactgtgagattcacccatctatgatcctgggagtatgt
gcatctattatccctttccctgatcacaaccagtctcccaggaacacataccagtctgct
atgggtaaacaggctatgggagtttacattacaaacttccacgtccgtatggatacgctg
gcacatgtgttgtattatccccagaagccccttgtaacaacgcgctccatggagtacttg
cgatttagagagttaccagcaggtatcaactcgattgtagctattgcatcatacacaggc
tataaccaggaagactctgtcatcatgaaccgttctgctgttgacagaggctttttcaga
tctgtgttctatcgctcatacaaagagcaagagtctaaaaaagggtatgaccaagaggag
gtttttgaaaagcctacacgtgaaacttgccaaggtatgagacatgcaatctatgacaaa
cttgatgatgacggtttgatagcacctggggtacgtgtatctggggatgatgtcatcatt
ggcaaaacagtaactctgccagaaaacgaagacgaactggaaagcaccaacaggcgtttc
acaaagagagactgcagcacttttctgcgcaccagcgagaccggtattgtcgatcaggtc
atggtaacccttaaccaggaaggatacaagttctgcaagattagggtgcgctctgtaaga
atcccacaaattggagataaatttgccagcagacacggtcagaaaggaacctgtggtatc
cagtacaggcaggaggatatgcccttcacctgtgaaggcatcacacctgatataattatc
aacccccatgctattccttcccgtatgaccattggtcacttgattgagtgtcttcagggg
aaggtgtctgcaaacaagggagaaattggtgatgctacaccttttaatgatgctgtcaat
gtgcaaaagatttccaatctcttatcagattatggctatcatctaagaggaaatgaggtc
ctctacaatggcttcactggtcgaaaaatcacgtcacagatcttcattggtcctacatat
taccagcggttgaagcacatggtagatgacaaaatccattctcgtgcaagagggccaatc
cagatacttaacagacagcccatggaaggcagatctcgtgatggtggccttcgttttgga
gaaatggaacgagattgccagattgctcatggagcagcccagttcttgagagagagattg
tttgaagcttcagacccatatcaagtccatgtctgtaacctctgtggaatcatggcgatt
gcaaacacgaggactcacacctatgaatgtaggagtgcttatcacaagccttttgaaatc
tctttccagatatccttggttcgaatgccctatgcctgcaaactcctcttccaagaacta
atgtctatgagtattgcacctcgtatgatgagtgtttag
DBGET
integrated database retrieval system
