Antrostomus carolinensis (chuck-will's-widow): 104529039
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Entry
104529039 CDS
T08541
Name
(RefSeq) LOW QUALITY PROTEIN: hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04137
Mitophagy - animal
acar04140
Autophagy - animal
acar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104529039
04137 Mitophagy - animal
104529039
04148 Efferocytosis
104529039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acar03000
]
104529039
Transcription factors [BR:
acar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104529039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
104529039
NCBI-ProteinID:
XP_028942117
LinkDB
All DBs
Position
Unknown
AA seq
848 aa
AA seq
DB search
MVYVTVTTGVAHWSTGAMLTPVTGAPGTAAAVLCLEADRTSLACCKSLLISSERRKEKSR
DAARFRRSKESEVFYELAHQLPLPHTVSAHLDKASIMRLTISYLRMRKLLDAGELETEAK
MEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLTQFELTGHSVFDFTHPCDHEE
LREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVNIKSATWKVLHCTGHIRVYDT
CGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELM
GYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATV
IYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVESPDMKMTKIFSKDDLDDT
NSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDEQQCDEVPLYNDVMLPSSSEKLQN
INMAMSPLPASETTKPLRSNADPALNREVVSKLEPNTEPLELSFTIPQVQEQPTSPSDAS
TSQSSPEPSSPNDYCFDVDNEIANEFKLELVEKLFAIDTEAKNPFSTQETDLDLEMLAPY
IPMDDDFQLRSFDQLSPLESSSSGSQNAATITIFQQTQTPSSTADEIKPVTESVDDVKTI
IVPSSPVHIINETSSAPASPYNGNRSRTASPIRAGKGTLDQTEKSCPGRPSLLTVTLKKR
STAMDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGSLFQQTSDRGGNASLAWKRVKGC
KTNGHNGVEQKTIILLSTDIASKLLGQSMDESGLPQLTSYDCEVNAPIQGNRNLLQGEEL
LRALDQVN
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggtttatgtgactgtaacaacaggagttgcacattggagtacaggggccatgttaaca
cctgtgactggtgcacctgggactgctgctgccgtgctttgtctggaggctgacaggaca
agtcttgcttgctgcaaaagcctgctgattagctcggagcgcagaaaagagaagtcaaga
gatgcagcccggttccgaaggagcaaggaatcagaagtattctatgagcttgctcatcag
ctgcccctgccccacaccgtgagcgcacacctggacaaggcatccattatgagactgacc
atcagctacttgcgcatgagaaagctgctagatgctggtgagctggagacagaagccaaa
atggagaaggagctgaactgtttctacttgaaagctcttgatggatttgtcatggttctg
tctgaagatggagacatgatttacatgtctgaaaacgtgaacaagtgtatgggactcact
cagtttgagttgacggggcacagtgtatttgatttcactcatccgtgtgaccatgaagag
ctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagagcaaaacacg
gagcgcagcttttttctcagaatgaagtgtacactgactagcaggggaagaacagtgaat
ataaagtctgctacatggaaggtactccactgcactggacacattcgtgtgtatgacaca
tgtggtaatcaaactcactgtggctacaaaaagcctcccatgacgtgtctggtgttgatc
tgtgaacctattcctcatccatcaaacatcgaggtccccttggacagtaaaacgttcctc
agtcgtcacagtcttgatatgaaattttcctattgtgatgaaagaattacagagttgatg
gggtatgagccagaggaactcctgggtcgctcaatctatgagtactatcatgcgctggat
tctgatcatctgaccaaaacgcaccatgacatgttcacaaaagggcaggtgaccacaggc
cagtacaggatgcttgctaaacaaggtggctatgtctgggttgaaactcaagcgactgtt
atatacaacactaagaattctcagccacagtgcatagtgtgcgtaaactatgtgttgagt
ggaattgttcagaaggacttgattttttcccttggacaaaccgagtgtatgctgaaacca
gtggagtctcctgatatgaaaatgaccaaaatattcagcaaagatgacctggatgataca
aacagcctatttgaaaaacttaaacaggaaccagatgctttaactgtgctggccccagct
gctggagacacaattatctctctagatttcagcagtaatgagtctgatgaacaacaatgt
gatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaattgcagaat
ataaatatggcaatgtccccactacctgcttctgaaactacaaagccacttcgtagcaat
gctgatcctgcactcaatagagaagttgtttcaaagctggagccaaacacagagccactc
gaactttcttttaccatacctcaggtgcaagagcaaccaaccagcccttctgatgcaagt
accagccaaagttcacctgagcccagtagtcccaacgactactgctttgatgtggataat
gagatagctaatgaattcaaactggaattagtggagaaactctttgcgatagatacagaa
gccaaaaatccattctctactcaggaaactgatttagacttggagatgttggctccttac
atcccaatggatgatgacttccagttgcgctcctttgatcagctatctccactggaaagc
agttcttctggctctcaaaatgcagccaccattaccatatttcagcagactcagacaccg
tcaagtactgctgatgaaataaaaccagtgacagaaagtgtggatgatgtgaagacgata
attgttccttcatctcctgtccacataatcaatgaaacgagtagtgccccggcatcacct
tacaatgggaacaggagtcgaactgcgtctccaatcagagcaggaaaaggaacgttggat
cagacagaaaaatcgtgtccgggaaggcccagtttgctaacagttactctgaaaaaaaga
tctactgcaatggatgaagaactaaatccaaagatgctagctttgcataatgctcagaga
aaacgaaaaatggaacatgatggttcactttttcaggcagttggaattgggtctttattc
cagcagacaagtgaccgtggaggaaatgcatcgcttgcttggaaacgcgtaaagggatgt
aaaacaaacggtcataacggagtggagcagaagacaatcattctactatcaactgacata
gcaagtaaacttctagggcagtcgatggatgaaagtggactaccccagctcacgagttac
gattgcgaagtcaacgctcccatacaaggcaacagaaacctgctacagggtgaagaactg
ctcagagccctggatcaagttaactga
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