KEGG   Antrostomus carolinensis (chuck-will's-widow): 104529135
Entry
104529135         CDS       T08541                                 
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
  KO
K06237  collagen type IV alpha
Organism
acar  Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04382  Cornified envelope formation
acar04510  Focal adhesion
acar04512  ECM-receptor interaction
acar04518  Integrin signaling
acar04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:acar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104529135 (COL4A6)
   04518 Integrin signaling
    104529135 (COL4A6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104529135 (COL4A6)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104529135 (COL4A6)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    104529135 (COL4A6)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:acar04147]
    104529135 (COL4A6)
   00536 Glycosaminoglycan binding proteins [BR:acar00536]
    104529135 (COL4A6)
Exosome [BR:acar04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104529135 (COL4A6)
Glycosaminoglycan binding proteins [BR:acar00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104529135 (COL4A6)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 104529135
NCBI-ProteinID: XP_010171641
LinkDB
Position
Unknown
AA seq 1672 aa
MKIMLMIFQPLLIVRGGGKKPFSGPCGGRDCTAGCKCFPEKGARGRPGPIGLQGPIGAPG
FTGPEGLPGAKGERGAVGPPGPTGQKGDKGPMGVPGFQGINGIPGHPGQPGPRGLPGLDG
CNGTTGSPGVSGSDGFPGLPGLPGRPGPKGVKGEPVFAQGSLKGMKGENGLPGLDGISGP
KGFPGPVGSAGPIGLPGLQGPMGPPGPPGPKGNMGLGFQGEKGEKGDVGLPGPPGPPPST
GILEFMGFPKGKQGEKGFGGVGEKGEKGVPGLPGGRGLLGLDGSDGIPGRKGHPGIPGYP
GLDGFEGMKGELGDIGPPGPPIVIDREGVVISGAPGDPGNPGIPGPPGDEGISGLPGLPG
APGFPGLERDGMGPGGSPGIPGMKGEVGEPGRAMIGLPGPRGRDGLPGLPGAPGLPGSPR
PSFPPDTILDGRIGATGEPGQRGLPGALGPKGYKGEAGDCACDGGVTRAGLKGISGLPGP
SGSPGVPGIKGVAGDPGTVGAPGLRGPTASAGQQGLPGLKGEKGDLSYATGRGARGDRGT
TAPRGPSGIPGSPGRDGLPGLPGPPGLPGDGGLGFPGEKGLPGLPGSKGHRGETGSPGIG
YPGPSGVRGLPGDPGMDGFPGQAGLPGPPGITLPCIVPGAYGPPGTPGFSGLPGPKGSKG
FPGIPGQPGLHGSKGQPGSPGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGASG
LAGTKGAPGDVFGAESGAPGDRGRPGLPGDKGLTGDLGFPGPKGLDGRPGLLGIKGKQGD
PGYSGVPGLRGPPGPGGPFGIKGKPGPLGSVGLTGAPGCQGLPGAKGLTGDVGPQGPAGM
KGFPGLDGAPGSPGERGFLGPPGTFGQDGRPGFSGPKGEKGSSGLLGFPGMPGLPGVPGV
NGFKGTSGTAGEKGSPGVVGLQGQKGDRGDVGPPGLPVLGPPEQALQFKGDKGDPGLAGL
GGFPGPRGDKGIPGSRGQLGLPGPAGSASKERGLPGDPGFPGPSGQPGLPGQKGTHGIIG
FPGMPGERGSDGITGTLGLPGSVGLPGPKGDQGETVGVPGIAGAKGERGDPGFPGERGRE
GLKGEPGYPGNTGVNGLKGGPGDLGQEGPAGIPGNAGLRGISGPPGPPGQPGSVGFPGAR
GTAGPKGFPGFPGLNGLNGLPGTKGSPGTPGLSEAGLKGPAGLPGPKGEEGSPGLGRGAV
GFPGPKGSSGDMGPPGPVGLPGLPGTPGASLPSDIRGRPGDAGVPGTDGSSGLPGPPGPP
GPPGPAADQGDTGSPGFPGVLGLRGIKGDVGPTGPVGLPGASGFKGIRGEPGLMGMPGKD
GPPGDPGHPGLKGETGRRGLPGRQGAPGITPQPEEITAPAGLPGLPGIDGVPGFDGDPGF
QGPAGKPGTKGLPGRSGLKGRDGLPGSPGIVGDPGPSGAPGPQGFEGVAGKPGSLGLPGM
PGRSVGVGYTLVKHSQSDQIPPCPIGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRF
STMPFIYCNINEVCYYASRNDKSYWLSTTAPIPMMPVDSGQIPQYISRCSVCEAPSQAVA
VHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECNGA
RGTCHYFANKYSFWLTTVEQSQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq 5019 nt   +upstreamnt  +downstreamnt
atgaagataatgctgatgattttccagccattactgatagtcagaggtggtgggaagaag
cctttcagtgggccatgtgggggccgtgattgtaccgctggatgcaaatgttttccggag
aagggtgcacggggtcgaccaggaccaattgggcttcaaggaccaataggtgcacctgga
tttactggcccagaaggtttgccaggagcaaaaggtgagagaggagcagtgggcccccct
ggaccaactggacagaaaggtgacaagggcccaatgggagttccaggatttcagggcatc
aacggaatcccaggtcaccctgggcagcctggacctagaggtctgcctggcctcgatggt
tgcaatggtaccactgggagccctggcgtttctggatcagatgggtttcctggcctacct
gggctgcctggtcgtcctggcccaaaaggtgttaaaggagaacctgtttttgctcaaggc
agtcttaaaggaatgaagggagaaaatggtcttcctggattggatggaatttctggccca
aaaggttttccaggtccagtaggttctgcaggccctataggattaccaggtttgcagggt
ccaatgggtccccctgggccaccaggtccaaaaggtaacatgggattaggctttcaagga
gagaaaggagaaaagggtgatgtagggctgccaggccctccaggtcccccaccatccact
ggaatactggaattcatgggatttccaaaagggaagcaaggagaaaagggctttggaggt
gttggagaaaaaggagaaaaaggtgtgcctggcttacctggtggcaggggtcttttggga
ctggatggatctgatgggattccagggagaaagggtcatccaggtattcccggctatcca
ggactggatggatttgaaggcatgaagggtgaattaggtgacattggtcccccaggccct
cctatcgttattgacagggaaggtgtagtcatttcaggtgccccgggtgaccctggaaac
ccgggaatacctggtcctccaggagacgaagggatcagtggtttaccaggccttccagga
gctccaggatttccaggcctggaaagagatggaatggggcctggaggatctccaggtatt
ccaggtatgaaaggtgaagtgggagaaccaggaagagcaatgattggattaccaggccct
cgaggcagagatggtttaccaggtctgccaggagcaccaggattgcctggctcaccacgc
ccttcatttcccccagacacgatcctggatggaaggattggtgccacaggggagcctgga
caaagagggcttccaggagctttgggtccaaaaggatacaaaggagaagcaggtgattgt
gcttgtgatggaggagttacaagagctggtctaaaaggcatctcaggtcttccaggtcca
tcaggaagccctggtgtgcctgggattaagggcgttgctggagacccaggcactgtgggt
gcaccaggactgcgaggccctacggcttcagctggtcagcaaggtcttccaggccttaag
ggagaaaaaggggatttgtcctatgcaacaggcagaggtgctcgtggggaccgtggtaca
acagcacccagaggaccttcgggcatcccaggaagccctggcagggatggacttccaggc
ttgccaggcccaccaggccttccaggtgatggtgggctgggtttcccaggtgaaaaagga
ctgccaggattacctggctccaagggccatcgtggagaaactggttctcctggcattgga
tatccaggtcctagtggagttcgtgggctgccaggtgatccaggaatggatgggtttcca
ggacaagcaggtcttccaggccctccaggtatcaccttgccctgcatagttcctggagca
tatgggcccccagggactcccggcttttcaggattgccaggtccaaaaggcagcaaaggc
tttcctggcattccaggccaacctggattacatgggtcaaaaggacagccagggtctcca
ggaataataggcttgcaaggggaacctggcttccctgggcctcgaggagagcaggggtca
caaggacttccagggctggatggaacagatggtttgcctgggaaaatgggtgcttcaggc
ttagctggaacgaaaggagctcctggagatgtatttggtgctgagagtggagccccggga
gaccgtggccgacctggactcccaggtgataaagggcttacaggtgatcttggatttcca
ggaccaaaagggttagacggaagaccaggcctcctgggtattaaaggcaaacagggtgat
ccaggatattcgggtgtccctggactgcggggacctcctggtcctggaggtccttttggc
attaagggaaaaccaggacccttggggtcagttggccttacaggagcaccaggctgtcaa
ggacttcctggagccaaaggcttgactggggatgtaggtccacaaggccctgctggtatg
aaaggcttcccaggtcttgatggtgctccaggatctcctggggaaagaggattcttaggg
ccacctgggacttttggtcaagatggacgtccaggtttctctgggccaaaaggagagaaa
gggtcttctggcctgcttggtttccctggcatgccaggcctgcctggtgtccctggggtg
aatggatttaaaggaacttctggcacagctggagaaaaagggagccctggcgttgtggga
ctccaaggtcaaaaaggtgacagaggtgatgtaggtccacctggtcttcctgttcttgga
cctccagaacaggcactgcaattcaaaggagacaaaggagatcctggattagctggactt
ggagggttccctggacctagaggtgacaaaggaatcccaggaagccgtggacagcttggt
ctccctggtccagctgggtcagcaagcaaagagagaggtcttcctggtgacccaggcttc
cctggtccatctggacagcctggtctgccaggacagaagggtacacatggtatcatagga
tttccaggaatgccaggagagaggggttcagatggtatcacaggaacacttgggttgcct
ggatctgttggcctccctggtcctaagggtgaccagggagagactgttggcgttcctggc
attgctggagcaaaaggagagcgaggggacccagggtttccaggagagagaggcagagaa
ggactcaagggtgaaccaggctacccaggaaacactggggtgaacggactcaaaggtggc
ccaggagatcttggccaagaaggaccagcaggaatccctggaaatgctgggctgagagga
atctctgggccaccgggacctccagggcagccaggatctgtcggattcccaggagctcgt
ggaacagcaggacctaaagggtttcctggatttccaggtttaaatggtctgaatggcttg
ccaggcacaaaagggtctcctggaacaccaggtctgagtgaagctggactgaaaggccct
gcaggtctcccaggtccgaagggtgaagaaggttctccaggcttgggtagaggagctgta
ggattccctggaccaaaaggctcatcaggagacatgggtccccctggtcctgtgggactg
cctggcttgccaggaacacctggagcttctcttccttcggatatacgtgggagacctggg
gatgctggcgttccagggactgatgggagttcaggtcttccaggtcctccaggaccacca
ggtccccctggcccagctgctgaccaaggtgacacagggagtccaggtttccctggtgtt
cttggcttgagaggcattaagggtgatgtgggacccactggtccagttggactccctgga
gcatctggattcaaaggtataagaggagagcctggccttatggggatgccaggtaaagat
gggcctccgggggatcctggtcaccctggcctgaaaggtgaaacgggccggcgaggtctc
cctggccgacaaggggctccaggtataacccctcagccagaagaaatcacagcccctgca
ggcttacctggtttgccaggaattgatggtgtccctggctttgatggagatcctggattc
cagggtccagctggaaaaccaggtacaaaagggctgccaggaagatctggtttgaaagga
cgtgatggtttacctggatcacctggcatagtcggggatccaggaccttcaggtgcccca
ggaccacaaggatttgaaggtgttgctggaaagccgggctcacttggtttgccgggaatg
cctggtcggagcgtgggcgttggatacactttagtgaagcacagtcagtcagaccaaatc
ccaccttgtcctataggaatgaataagctctgggacggctacagcttattgtatgtggag
gggcaggaaaagtcacacaaccaggatcttggctttgctggctcgtgtttgcctcgcttc
agcaccatgccttttatttactgcaacattaacgaagtgtgctactacgccagccgcaat
gacaagtcctactggctctccaccactgctcctatccccatgatgccagtggacagtggt
cagatcccacagtacatcagtcgctgctcagtgtgcgaagcaccttcgcaggctgtggct
gtgcacagccaggacatcaccatcccacagtgtccccttggctggcgcagcctgtggata
ggatactcctttcttatgcacactgcggctggtgccgaaggcggaggtcagtcccttgtc
tcacctggctcttgcctggaggatttccgtgctactccattcattgaatgcaatggtgcc
aggggaacgtgccactactttgcaaacaaatacagcttctggctgacgactgttgaacag
tcgcagcagtttgtcagtgctcctccctcagaaactctgaaagcaggacagcttcgaaca
agggtcagccgctgccaagtctgcatgaagaacttgtaa

DBGET integrated database retrieval system