Antrostomus carolinensis (chuck-will's-widow): 104529336
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Entry
104529336 CDS
T08541
Symbol
CASC3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03013
Nucleocytoplasmic transport
acar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104529336 (CASC3)
03015 mRNA surveillance pathway
104529336 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104529336 (CASC3)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104529336 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
104529336
NCBI-ProteinID:
XP_010171923
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
ESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKVELKQDSNDSCESAAKAEKGDEKPD
SRGAVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRXTYIPRKGLFFEHDLRGQTQE
EEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPDDIKPRRMR
KPRFGSPPQRDPNWSNERPNKPPRHQGADSTSATPRTFTNRSSAGTGRMPPPRNYPRVGG
YKETRPSYRASEANTQHLSRNGEQVKQESNYRAKRAEQTPPRDKSPEVEAAHTHSSPVRE
EAALENQGTAADTAQPPPDRPIEKKSYSRARRTRIKAGDAGKLADEIPASEGLTPVPPKP
VQAETSPPPVKSSNWESPVESNLDGLEQEMTQMNLTEQNWAPGQSQFMQPRELRGIPNHM
HVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPAPPMHISIMEGHYYDPLQFQGP
IYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPMANPGLYPPPVSMPPGQPPPQQL
LAPTYFSPPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQAQSQVYGGVTYYNTVQQQVQP
KPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gaaagtgaggatggcattgaaggagatgctgtgctctcagattacgaaagcgccgaagac
tcggaggcagaggaagaggattacagcgaggaagaaagtgccaaagtagaactgaagcag
gatagtaatgattcctgtgagtcagcagcaaaagcagagaaaggggatgagaaacccgac
tccagaggtgccgtgaccggggagaggcagagcggggacgggcaggagagcaccgaacct
gttgagaataaagttgggaaaaaagttcccaagcacttggatgacgatgaggatcggnna
acttacatcccacgcaaagggctcttctttgagcatgacctgcgggggcagactcaggag
gaggaggtcaggccgaagggtcgtcagcggaagctgtggaaggacgagggtcgctgggag
cacgataaattccgggaggacgagcaggcccccaagaccaggcaggagctgatcgctctt
tatggctatgacatcaggtcagctcacaaccctgatgacatcaaacccaggaggatgcgc
aaaccaaggtttgggagtcctcctcagcgagacccaaactggtccaatgagaggccaaat
aaacccccaaggcaccaaggtgcagacagcacctcagctaccccacgaaccttcaccaac
aggagctctgcaggcacagggaggatgcccccacctaggaactatccaagggtggggggc
tataaagaaacccgtccaagctaccgagcttcagaagcaaacacccagcatctgtctcga
aacggcgagcaagtgaaacaggagagcaactaccgagcgaagcgtgcggagcaaacccca
ccgagggacaagtcacccgaggtggaagcagcacacacccacagcagccctgtgagggag
gaggctgctttggagaaccaaggcacggccgctgacactgcacagcccccaccagacaga
ccaattgaaaagaagtcttattcccgggcaagaaggaccagaatcaaagctggggatgcg
gggaagctggcagatgaaatacctgcatcggaagggctcactcctgtgcctccaaaacct
gtgcaagctgagacctcccccccaccagtcaagagcagtaactgggagtcaccggtagaa
tccaacttggatggactcgagcaagagatgacccaaatgaatctcactgagcagaactgg
gcgccggggcagtcgcagttcatgcagccccgggagctgaggggtattcctaaccatatg
cacgtgggaactgggccaccacctcagtttaacaggatggaggaaatggcggtgcagggg
ggccgcgtgaaacgctactcgtcgcagcggcagagaccgccggtgccggagcctgcaccc
cccatgcacatcagcatcatggaagggcactactacgacccactacaattccagggacca
atctacacccacagtgagaacccagccccgctgccgccccaggggatgatcgtacagcca
gaaatgcatctccctcatccaggtttacatccccaccagacgcccgcccccatggcaaac
cctgggctctaccctccgcccgtctccatgcccccaggccagcccccgccgcagcagctg
cttgcaccgacctacttctcccctcctggagtcatgaattttgggaatcctggctacccc
tatcccccaggagcactaccccctcctcctcctcctcatctctattctaacacgcaggcc
cagtcccaggtctatggaggggtcacgtactacaacactgtccagcagcaagtgcagccc
aagccttctccacctcgaaggacgtcccagcctgtgactatcaagccaccacctcccgag
gacagcaaaggagaaaagtcaaaggagaggagcaacacgtag
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