Antrostomus carolinensis (chuck-will's-widow): 104529521
Help
Entry
104529521 CDS
T08541
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acar04515
]
104529521
Cell adhesion molecules [BR:
acar04515
]
Cadherins
Cadherin related
104529521
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
EGF
Cadherin_CELSR2_9th
hEGF
EGF_Teneurin
EGF_2
Laminin_G_3
PSV_trans_reg_dom
Y_Y_Y
GH32_BT1760-like_C
Motif
Other DBs
NCBI-GeneID:
104529521
NCBI-ProteinID:
XP_010172162
LinkDB
All DBs
Position
Unknown
AA seq
1777 aa
AA seq
DB search
MSSNYEVSVPEGADVGTSVVQVLATDLDSGLHGEVHYLILKDASEDYQFFTIEPETGIIS
TRASFDREKRASYLIEVQSQDSSDSARPGVHGQPNTDTAYVRIFVSDVNDNTPAFPWSVY
EVSIDEDRDVGSPVVTATAHDEDEGANAKLRYQITSGNVKGVFDVEPEVGTVFIAQPLDY
EQEQRYELRLVASDGKWENHTLIIISVINKNDEAPVFTQNEYQGSVLEELTDLPVLVLKV
SATDPDQAADQNAINYTLHGQGASSEFSINENTGEISTNKRLDREKRSTWRFLVLATDES
GEGLTGFADVIIKVRDVNDNAPLFLCVLDGCFMGHVPEDSPADTPVMEMTAVDLDDPKAG
MNAVLTYSIIQNVQNEINLNLFSIDSVSGTIYTVLGSLDREKEEKYLVVVEARDGGGLTG
TGTATILVTDVNDHAPVFLQRIYTAFVSENASINTEVAVVSAVDRDEGENAMVMFSIIDG
DNDRKFSIETDEVNNCGFIRLRKRIDFEKPHERVFNLTVKAEDMDFFSIAHCVIYVEDSN
DHAPVFYPKFYEVAGLGEDAPVGTKVVQVSAVDLDSGLNGRFSFHLLNKSDPGGQFSVAS
DGWVMVAGLLDHETVTQYQLTVIATDMGQPPLTGSATVLVTLQDVNDNGPEFEAHYNPVV
WENTASPQVIQMNETSTLLYAKDRDTAVNGAPFSFHLLSDFDSLTNFNLQDFHNGSALLT
ALRTFDREVQKVFYLPILITDSGIPPMSSTNTLTVNIGDQNDHPHSAGYMECLIYSYDGI
FPMTVLGQVHAPDDDDWDHKIYQFEGKTSRYFILNDNSGLLTIKEGTPPGTYNIRVRVID
GVWPDVVSTVKVIVKEIKDDALHNAGSIRIKDITPEEFISQSPEKQSKYYQMKKLLSEII
SVQLENVHIFSVLNSASQTQGVDVWFAVYGPPYYKAEKLNGNVAASRAWLENILDINITQ
IGIDECVTANCTHSSGCISKNEQTHMPTITTAGSVSLVSVTVLSRALCGCAARESPHLSC
SSYQTNPCLNGGTCLDTDLGYRCKCSANFHGPDCQQTKHSFRGHGYAWFPPLKPCFESRI
SLEFITEVADGLLLYHGPVARGHPGLREDFLALELSGGVPSLTVSHSSGELFLQLSRKVN
VADRRWHNIKIIHDGKKVKLILDHCVNVSVRGDDSVVKKISQMDLSACEASEETVGTQSL
ARLFSGHQPLQLGGVKKTLPYLDSQRLFRGFVGCIRNVIVDSQVYDLEHPAESLNSAPGC
VLTDEMCQRGGMASCGVHGKCVGGWDFFRCDCSPGYAGPACEKALPEWAFGRDSWIHYEP
RSILSTHSTQIQLMVRTRISHSTLLSLASADGNGYIRLEVVEGFFSVNFSLGDKNHSLRM
RTLHINNGQWVLLTMERYNNEFTLRVNSGGGDQEVTSVLGTKRWFEMDWTSIVLGNRLPN
HSESNFQGCMRDVQLNGQPLLVESKSAEFGLILRRQGVTMGCYSSACSSQPCYSPFLCVD
LWRKYECRCPAGKVEVTDNLTGLRHCTSSPCGHWTCRNGGTCVAQSQDKIICQCPEGYKG
RWCEISQVKAGRPVGLSSGSILAISMCLLVFLALLVSYTVWSQWGSSGFRKGGIYHIPEE
RESWEDVRENVFNYNEEGGGECDQNAYDIDELKKPLHTISHFSLRAAAPLSRTPTDPKIN
SLPKHAHQKQSPSAVTSVPDFKEYVSQIIWDADNDLQSLPADSIHFYCLEGQCSLAGSLS
SLDSTCADEDLNYDCLQEWGSKFDKLKELYKVSNEHL
NT seq
5334 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaactacgaggtgtctgtgccagaaggagctgatgttggcacatctgtggtt
caggtgttagctacggacttggattctggcctacatggagaggttcactacttaatattg
aaagatgctagtgaggattaccagttcttcaccattgagcctgagacaggaattatttcc
acccgtgcatcttttgacagagagaaaagagcctcttacttgattgaagttcagtctcag
gactcttcagattctgctagacctggtgttcatgggcagcccaacacagacacagcctac
gtaaggatttttgtcagtgatgtgaatgacaacactccagcatttccttggtcagtgtat
gaggtcagcatagatgaggacagggatgttggaagtcctgttgtgacagcaacagcgcat
gatgaagatgagggtgcaaatgccaaactaaggtatcagatcacatcaggaaatgtgaaa
ggagtttttgatgtggaacctgaggttggaactgtattcattgctcagcctctggattat
gaacaagaacaacgttatgagctccggcttgtagcttctgatggaaaatgggaaaaccac
actcttatcatcatcagtgtcatcaataagaatgacgaagcaccagtcttcactcagaat
gaataccagggcagtgtcttggaggagctcacagatctgcctgtacttgtcctaaaggtt
tctgcaacagaccccgaccaagcagctgatcaaaatgccattaactataccctgcacgga
cagggagccagtagcgagttcagcatcaatgagaacacaggcgagatcagcacaaataaa
aggttagaccgtgagaagcgatcaacatggcgctttcttgttcttgcaacagatgagagt
ggagaaggactgacgggctttgcagacgtgatcataaaagtgagggatgtgaatgacaac
gcaccccttttcctctgtgtgttggatggctgtttcatgggccatgtcccagaggattct
ccagcagacactcctgtcatggaaatgacagcagtggacctcgacgacccaaaggctggt
atgaatgctgtgctcacatacagcatcattcagaacgtccaaaatgaaattaatctgaac
ttgttctcaattgactcagttagcggcactatctatacagtgcttgggtccctggatcgg
gagaaggaagagaagtaccttgtagtagttgaggctagagatggaggagggctcactggg
acaggcaccgccactattttggtgactgatgtaaatgatcatgctccagtcttcttgcaa
aggatctacacagcatttgtctctgagaatgcaagtattaacactgaggtggcagtggtg
tctgctgtggacagagatgagggagaaaatgccatggtgatgttcagcatcattgatggg
gacaatgaccgcaagttctccatagagacagatgaagtgaacaactgtgggtttatccgg
ctacggaagcggattgactttgagaagcctcatgagagggtgttcaatttgactgtgaaa
gcagaggacatggatttcttcagcattgctcactgtgtgatctatgtggaggactccaat
gaccatgctcctgtcttctaccccaagttctatgaagtggccggactgggggaagatgcg
ccagttggcaccaaagttgttcaggtttctgctgttgacttggattctggtctgaatgga
aggttttctttccacctgctaaacaagtctgacccaggtggccagttctctgtggctagt
gatgggtgggtgatggttgcaggactgctggatcatgagacagtgactcaataccagctc
actgtcattgccactgatatggggcagccccctctgactggcagtgccactgttttagtg
actctgcaggatgtaaacgataatgggccagagttcgaggctcactataacccagtggtc
tgggaaaacacagcttctccacaggtcatccaaatgaatgagacctctacattgctgtac
gctaaggaccgagacactgctgttaacggagcacctttctcctttcatcttctcagtgat
tttgatagtctgactaacttcaacttgcaggacttccacaatggaagtgccttgctcact
gcactgcgtacctttgacagggaagtgcagaaagtgttctacctgcccatcctgatcacg
gacagtgggatcccaccaatgagctccaccaacacgttgaccgtgaatattggggaccaa
aatgaccaccctcattctgctggctacatggaatgtctcatttacagctatgatggtatc
ttccctatgacagtactgggccaggttcatgcccctgatgatgacgactgggatcacaaa
atctaccaatttgaaggaaaaacatcaaggtactttatccttaatgataactcaggtttg
ctgactattaaagaaggaaccccaccaggaacatacaacataagagtcagagtcattgat
ggagtgtggccagatgttgtctcaactgtaaaggttatagtgaaggaaatcaaagatgat
gccctccataatgctggttctatacgaataaaagatatcactcccgaggagttcatatcc
caatcccctgaaaaacagagtaaatactaccagatgaagaagctgctttcagaaattata
tcagtccaacttgaaaacgttcacattttcagtgtattaaatagtgccagtcaaacccaa
ggggttgatgtttggtttgcagtttatggtccaccctattataaagcagaaaaacttaac
ggcaacgtagcagcctccagagcatggctggaaaacatcttggatataaatatcacccag
attggcattgatgaatgcgtgactgcaaactgcactcatagcagcggatgcatcagcaag
aatgaacagactcatatgccaaccataaccacagctggaagcgtttcactggtgtccgtg
acagtcctgagtcgtgccctgtgtggttgtgcagctcgggagagtcctcatctttcctgt
tcctcataccagacaaacccctgtctcaatggtggcacatgtctggatactgatttgggc
tacaggtgcaaatgttctgcaaatttccatggaccagactgccagcagacaaaacacagc
ttcagaggccacggttatgcttggttccctcctcttaagccttgctttgagagccgcatc
tccttagagtttatcactgaagtcgctgatggccttctgttgtaccacggaccagtggca
cgagggcatcctggtctacgggaagatttccttgcattagagctctctggtggtgttccg
tcgctgaccgtgagccacagctctggtgaacttttcctgcagctgtcacgaaaagttaac
gttgcagatcgccgctggcacaatataaaaattatacatgatggaaagaaagtgaagctg
attcttgaccactgcgtaaatgtctcagttagaggtgatgacagtgttgtcaagaagatc
tcccaaatggatttgtctgcctgtgaagcctctgaagagactgtgggaactcagagcctg
gctaggctcttcagtggccatcagcccctgcagctgggtggagttaagaagaccttgcct
tacctggattcacaaaggctcttcagagggtttgttggctgcatccgcaatgtcattgtt
gatagtcaggtctatgatttagagcaccctgcagagtccttgaacagtgcacccggctgt
gtccttacggatgagatgtgtcagagaggaggaatggcctcctgtggtgtccatggcaag
tgtgttggtggttgggacttctttcgctgtgactgttccccgggatatgctggaccagcg
tgtgaaaaagctcttccagaatgggcttttggaagggacagttggatccattatgagccg
agaagcatcctcagcactcacagcactcagatccagctgatggtgcgcacccgtatctcc
cacagcacccttctcagcttggcctctgcagatggaaatggatacatccgactggaggtg
gttgagggtttctttagtgttaacttcagcttgggggacaaaaatcactctctgagaatg
aggacattacatataaacaatggccagtgggttcttctgaccatggagcgctacaacaat
gaatttaccctgcgtgttaacagtggtggaggtgatcaagaagtgacctctgtcttgggt
acaaaaagatggtttgaaatggattggacaagcatcgtgctaggaaaccgccttcccaat
cattcagagagcaatttccaaggttgtatgcgtgatgtccagctgaatggtcagccgctt
cttgtggaaagcaaaagcgcagagtttggcttaattctcaggcgacaaggtgtcacgatg
ggatgctattccagtgcctgcagcagccagccctgttacagcccttttctttgcgtagat
ctgtggagaaaatatgaatgccggtgtccagctgggaaagtagaagtgactgacaacctt
acaggtctcagacactgtacctcatcaccttgtggacactggacctgtaggaatgggggt
acctgtgtggctcaatcccaagacaagattatctgccaatgccctgaaggttacaaggga
aggtggtgtgaaattagccaggtgaaggctggaagacccgttggactcagctctggctca
attctggcaatcagcatgtgcctcctcgtcttcctagcactcttggtctcctacaccgtg
tggagtcagtggggaagctcagggtttcggaaaggaggaatttaccatattcctgaagag
cgtgaaagctgggaggatgttagagaaaatgtcttcaattataatgaagaaggaggtgga
gaatgtgaccagaatgcttacgatatagatgaactgaagaaacctctccataccatttcc
cacttctccttgagggcagctgctccactctccaggacacccactgacccaaaaataaac
tcactcccaaaacatgcacatcagaaacaatcaccatcagctgttaccagtgtcccagac
ttcaaggaatatgtttctcaaatcatctgggatgcagacaatgatctacagagtcttcca
gctgacagtattcatttttactgcttagaagggcagtgttctctagcagggagccttagt
tccttagactccacttgtgctgatgaagatctaaattatgattgcctccaagaatggggg
tcaaagtttgacaagcttaaagaactctataaggtctcaaatgaacatttgtag
DBGET
integrated database retrieval system
