Antrostomus carolinensis (chuck-will's-widow): 104529663
Help
Entry
104529663 CDS
T08541
Symbol
SMG5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104529663 (SMG5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104529663 (SMG5)
03032 DNA replication proteins [BR:
acar03032
]
104529663 (SMG5)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104529663 (SMG5)
mRNA cycle factors
Common to processing body (P body) and stress granule
104529663 (SMG5)
DNA replication proteins [BR:
acar03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
104529663 (SMG5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
104529663
NCBI-ProteinID:
XP_010172328
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
CKKPVLASEKEMEWAQMACHRCLVYLGDLARYQNELAGVDTELLAERFYYQAISVAPQIG
MPFNQLGTLAGSKYYNVEATYCYLRCIQSEVSFEGAYGNLKRLYDKAAKMYHQLKKCETR
KLSPSKKRGKDIKRLLVSFMYLQSLLQPKSSSLDSELTSLCQSVLEDFNLCLFYLPSPPN
LSSTSEDEEEYESGYSFLPDLLIFRMVIICLMSVHSLKRAGSKQYSAAIAFTLALFSHLI
NHVNIRLQAELEEGENPVPAFQSDGTDDQEPREPLNSIEKEAETDLANHQPSEEQRKNDC
KKSKKYSRLSCLRRRRHPQKVDESDLSEGFDSDSSQGSIKGSDGSESGSEKSDEEAEAAF
DVETDSDMNSQESRSDLEDMEDEPGEEGSGRGKSGPKESLKNCVDGSGLGDSKSPSISKI
EALDPAVNGPASLSANDASIASNLQAMSTQLFQTKRCFRLAPTFSNILLKPNSEPPVLKD
GIESKPCVNGDLEKPSLAEQDDVSDSEESISSNKSCRNERSLQEKLEIVTNEGLLLTVKV
FLDWLRTNTDLIIMCAQSSQSLWNRLSVLLNLLPSAADLQESGLALCNEVRDILSEAELP
DLKANLLLPEDVALRNLPPLKNAHKRLNFEQDRPIFSAVEESVVRICCIRSFGHFITHLQ
GSILQFNSELGIFISIAQSEQDNLLHQAQAQFHMAAEEARRNRLMRDMAQLRLQLEVSQL
EGSLQQPKAQSAMSPYLVPDTQALCQHLAVVKQLATSGRFIIIIPRTVIDGLDFLKKENA
GARDSIRYLEAEFKKGNRYIRCQKDVGKSFERHKLKRQDLDAWNLYKILDSCKQLTVSQG
SGEDDTTGMVTIITGFQLEDPSTFSAPMQSAIQAATSASVEIKNVLEFYKQWKEMG
NT seq
2693 nt
NT seq
+upstream
nt +downstream
nt
gctgcaagaaacctgtgttggcatcggagaaggagatggagtgggcacagatggcgtgtc
acaggtgtctggtttatctgggagatctagctcgttatcagaatgaactggcaggtgtgg
acacggagctgctggccgaacggttttactatcaagccatttctgttgcgccacaaattg
gcatgcccttcaaccagctggggacattggcagggagcaaatactacaatgtggaagcta
cttattgctacttacgctgtatccagtctgaagtgtcctttgaaggtgcctatgggaacc
tgaagcggctgtatgacaaagcagccaaaatgtatcaccagttgaagaaatgtgaaacca
ggaagttgtctccaagcaagaaacgaggcaaagacattaagaggttgctggtgagcttta
tgtacctgcagagtcttttgcagccaaagagcagctctctggattctgagctgacatctc
tctgccagtctgtgctggaggatttcaacctgtgcttgttctacctgccctctcctccta
atctgagctcaactagtgaagatgaagaagagtatgagagtggctactccttccttcctg
atctcctcatctttcgcatggtgatcatctgcctcatgagtgttcacagcctcaagaggg
caggttcaaagcagtacagtgcagccatcgctttcacgctggccctcttctctcacctga
taaatcacgtcaatattcgcctgcaggcagagctggaagaaggggaaaatccagtgccag
cctttcagagtgatggcacagatgaccaggagccacgggagccattgaactcaattgaga
aggaagctgaaactgacttggccaatcatcaacccagcgaggaacaacggaagaatgact
gcaagaaaagcaagaaatactcccgtctctcctgtttgcgtcgccgccgccacccccaga
aggtggatgagagtgacctgagcgagggctttgactctgactccagccagggctccataa
agggcagtgatggctcagaaagtggctcggagaagagtgacgaggaagcagaagctgctt
ttgacgtggagacggactctgacatgaacagtcaagaatctcggtccgacttggaggaca
tggaggatgaaccgggtgaggagggaagcggccgaggcaaaagtgggcccaaagagtcct
taaaaaactgtgtggatggcagtgggctgggggactccaagagcccaagcatctctaaaa
ttgaggctctggatccagcagtcaatgggccggcttccctgagcgctaacgacgcaagca
tagccagtaatctccaggccatgtccacccagctgttccagaccaaacgctgctttcgct
tggctcccactttcagcaacatccttctgaaacccaacagtgaaccacctgtcttgaagg
atggaatagaaagcaagccatgtgtcaatggagatctggagaagcccagcttggcagagc
aagatgatgtgtctgactctgaggaaagcatttcaagtaacaaatcctgcaggaatgagc
gatcccttcaggagaagctagagatcgtgaccaacgaagggctgcttctcactgtcaagg
tgttcctggactggctgaggacaaacacggacctcatcatcatgtgtgctcagagctctc
agagcctgtggaacaggctgtctgttctcctgaaccttctgccttctgctgcagacctgc
aggaatcagggctggccctgtgtaatgaagtcagggacattctgagtgaggctgaactcc
cagacctgaaagccaacttgctgctcccagaagatgtggccctgcgaaatcttccccctc
tgaaaaatgcacacaagaggctgaactttgagcaggaccggcccatcttctcagcagtgg
aggagtctgttgttcggatttgctgcattcggagctttggccatttcattacccacttgc
aaggcagcatcctgcagttcaactcggagcttgggatcttcatcagcatagcacagtcgg
agcaagacaacttgctgcaccaggcccaagcccagttccacatggctgcagaggaggctc
gtcggaacaggctgatgagagatatggctcagcttcgtctgcagctggaggtttctcagc
tggagggaagtctccagcagcccaaagcgcagtcagccatgtctccttaccttgtcccag
atacccaggccctctgccagcacctggctgttgtcaagcagctggccaccagcgggaggt
tcataatcatcattcctcgaacagtgattgatggcttagacttcctgaaaaaggagaatg
caggtgctcgggacagcatccggtatctggaggcagaatttaaaaagggaaacaggtaca
ttcgttgccagaaggatgttgggaagagctttgagaggcataaattgaagagacaagatt
tagatgcctggaatctctataaaatactggacagctgcaagcaactgacagtgtcccaag
gaagcggagaggatgacaccacaggaatggtcaccatcatcacgggcttccagctggagg
acccaagcacgttctcagcacccatgcagtctgccatccaggcagccaccagtgccagcg
tggaaataaaaaatgttctggagttctacaagcagtggaaagagatgggctga
DBGET
integrated database retrieval system
