Antrostomus carolinensis (chuck-will's-widow): 104529830
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Entry
104529830 CDS
T08541
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04510
Focal adhesion
acar04512
ECM-receptor interaction
acar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104529830
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104529830
09142 Cell motility
04820 Cytoskeleton in muscle cells
104529830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acar04147
]
104529830
00536 Glycosaminoglycan binding proteins [BR:
acar00536
]
104529830
Exosome [BR:
acar04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104529830
Glycosaminoglycan binding proteins [BR:
acar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104529830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104529830
NCBI-ProteinID:
XP_028942392
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
GLTGSKGDRGLPGLPGSVGLPGEMGLPGLPGYGPQGIRGFKGSKGIPGLPGLPGEAGLKG
ETSSITPLPALPGPQGPDGLPGPPGVPGRVGARGQPGDSGHPGPTGDTGFPGLGFPGNPG
PKGDKGLAGGRGSPGCEGKIGDPGRAGNLGQPGEKGDPGMVIPGDPGRLGSPGGRGIXXX
XXXXXXXXGLPGLSGRAGRDGDDGLRGDRGSPGVPGDPGFPGKPGECLIGLPGLPGGQGA
TGSPGGRGLQGSKGKLGPSGLSIPGIFGNPGEPGLIGLQGNTGFPGPKGQSGRPGISGVP
GSRGEPGMMGLLGIPGPPGIIGRPGNPGIRGNSGFPGLKGRKGFPGAKGEPGDKGFPGPS
ETLVGIGTKGEKGLKGFQGRMGLRGEKGDAGVQGPPGFDGSEGIPGLPGVKGFMGLPGIP
GRQGFPGAPGNKGDIGIPGPKGQKGSPGFPGPSGDPGPLGYGGFPGDKGEPGYPSAGPPG
EPGPKGDPGPPGVLGSKGEKGSQGHPGHKGVPGPYGIRGENGGAGIPGKLGPPGDTGVKG
RQGRPGQQGVTGPPGPVGNPGKNGLVGERGNQGQDGMPGPPGVKGEPGAPGRGIPGLQGI
PGRRGIKGDMGLPGFPGPPGMKGHRGDQGPIGPPGLVGLPGFQGATGMAITGQKGNRGVP
GLDGRPGAPGFPGPPGLPTLSMKGSKGARGADGIPGPTGPAGDIGPPGPKGIEGRSGYPG
ARGDPGFLGFPGVKGEKGNQGPPGPQGAEGPRGPKGQHGPPGVPGRIFSVPGSKGPPGLP
GYPGPPGDQGIQGIPGLQGPKGVKGLPGSFGLPGQPGLLGPKGDRGFPGQRGQPGLIGFP
GLQGLPGSPGTIIAGPTRRGFIFTRHSQSTKIPSCPHATSQIYVGYSLLFVQGNERAHGQ
DLGTAGSCLQRFTTMPFLFCNTNDVCSFASRNDYSYWLSTAAVMPVDMAPISGRALEPHI
SRCVVCEGAAMVIAVHSQTTVVPACPEGWISLWKGFSFVMYTSAGSEASGQALASPGSCL
EEFRAIPFIECHGRGTCNYYTNSYSFWLASLNPRRMFRKPLPQTLKAGELENIISRCQVC
MKRPV
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
ggactgactggttcaaaaggagatagaggactacctggattgcctggcagtgttggtctt
cctggagagatggggcttcctggactgccagggtatggaccacaaggaataagaggtttc
aaaggctctaaaggaatacccggtctgcctggattacctggagaagctggtctgaaagga
gagactagtagcataactccattacctgcgttgccaggacctcaaggaccagatggttta
cctggacccccaggagtgcctggtagggttggagcaagaggtcagccaggtgattcagga
catccagggccaacaggtgacacaggctttccagggcttggatttcctggaaacccaggt
ccaaaaggagataaaggacttgcaggaggcagagggtcaccaggctgtgaaggaaagatc
ggagatccaggcagagctggaaacctaggacaaccaggagaaaagggtgacccaggcatg
gttattcctggagacccaggtagactgggctcaccaggcggtcgtggcattnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnncaggacttccgggcctatcagggcgtgctggacgtgat
ggtgatgatggcctaagaggagatcgtggctcacctggagttcctggagatccaggtttt
ccagggaaacctggtgaatgtcttattggcctgccaggtttgccaggtggtcagggagct
acaggctctccaggaggaagaggtttgcaaggttcaaaaggaaaactgggtccctctggc
ttgagtatcccaggaatctttggaaaccctggagaacctggattaataggtcttcaggga
aatacaggatttcctggtcccaaggggcagtctggaaggccaggaatctctggtgtgcca
ggctcaaggggagagccaggaatgatgggcctcttgggaattcctggaccccctggcatt
attggaagaccaggcaacccgggtatcagaggtaattctggctttccaggactaaaggga
agaaaagggtttcctggagcaaaaggcgagccaggtgataaaggttttcctggaccatct
gagaccttggttggtattgggactaaaggagaaaaaggcttaaaaggatttcaaggaaga
atgggtctaagaggagaaaaaggagatgccggtgtgcaaggtcccccaggttttgatggg
tctgaaggaatacctggtctgccaggtgtcaaaggatttatgggtcttccagggatccct
ggaagacaaggattcccaggtgcaccaggaaacaaaggagacattggaattccaggtcca
aaaggacagaaaggatctccaggctttccaggaccatcaggtgaccctggtccactgggc
tatggtggctttccaggtgacaaaggagagcctgggtacccatctgctgggcctccagga
gaacctggtccaaagggagacccaggccccccaggagttttgggcagcaaaggagaaaaa
ggatcccagggtcatccagggcataaaggagtaccaggaccatatgggatcaggggggaa
aatggaggtgcaggaatcccagggaagcttggacctcctggagatactggtgttaaagga
cggcaaggccgcccaggacaacagggcgttacaggccctcctggtcctgttggaaaccct
ggaaaaaatgggcttgttggtgaaagaggtaatcaaggtcaggatggtatgcctggtccc
ccaggagtaaagggagaaccaggagcaccagggagaggaatccctggccttcaaggtatt
cctggtcgtagaggaatcaaaggggacatgggactgcccggttttcctgggccgccaggt
atgaaaggtcatcggggtgatcaaggacccattggaccccctggcttagtggggttacct
ggatttcaaggtgcaacaggcatggcaattactggccaaaaagggaatagaggtgttcct
ggcttagatggaagaccaggtgctcctggttttccagggcctcctggtcttcccactctc
agcatgaaaggaagcaaaggtgctagaggggcagatggcatcccagggccaacaggccca
gccggcgacattggtcctccaggtccaaaaggaatagaaggtcgatcaggttatcctggt
gctagaggggaccctggatttcttggattcccaggtgtaaaaggagaaaagggtaatcaa
ggaccccctggacctcagggtgcagaagggccaaggggaccaaagggccagcatggtcct
cctggagtccctgggagaatattctctgtcccaggaagcaagggtcctcctggactgcca
ggatacccaggaccaccaggtgatcaaggaattcaaggaattcctggactacaaggacct
aaaggagtaaaaggtctaccaggaagttttggtcttccaggtcaaccaggactgctgggt
ccaaaaggagacaggggctttccaggacaaagaggacaacctggactgattggctttcca
ggtctacaggggttacctggatcaccaggtactatcattgctggtccaacaagaagaggt
tttatctttacccggcatagtcaatcaacaaagattccttcatgcccacatgcgacgtcg
cagatctatgttggctattcgctgctttttgtacaaggaaatgaacgagcacatggacaa
gatcttggaacagctggtagctgcttgcagagatttaccaccatgccattcttattctgt
aacaccaatgatgtctgtagttttgcttctcgcaatgactattcatactggctgtcaact
gcagcagtaatgccagtagacatggcaccgatttctggcagggcactagagccccatata
agcaggtgtgttgtctgtgaaggagctgcaatggtaatagcagttcacagccaaacaact
gtagttcctgcatgtccagaaggctggatatctctctggaagggcttttcctttgttatg
tatacaagtgccggctcagaagcttctggccaagcattggcatctcctggatcttgtttg
gaagaatttcgagccatcccattcatagagtgccatggcagggggacttgcaactactac
acaaattcctacagcttctggttggcatcattgaatccaagaagaatgttcaggaaacct
ctgccacagactttgaaagcaggagaactagaaaatatcatcagccgttgtcaggtctgc
atgaagagaccagtctaa
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integrated database retrieval system
