KEGG   Antrostomus carolinensis (chuck-will's-widow): 104529960
Entry
104529960         CDS       T08541                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
acar  Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:acar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104529960 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:acar03400]
    104529960 (APTX)
Enzymes [BR:acar01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     104529960 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     104529960 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     104529960 (APTX)
DNA repair and recombination proteins [BR:acar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104529960 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     104529960 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT OmcA-like_N FHA zf-C2H2_4 FtsK_SpoIIIE_N Ribosomal_L34e zf-FCS zf-C2H2_6 zf-C2H2 zf-BED
Other DBs
NCBI-GeneID: 104529960
NCBI-ProteinID: XP_010172711
LinkDB
Position
Unknown
AA seq 350 aa
MRVCWLVGKEKCSQRMKLPHLEAVVIGRGPETGITDKKCSRQQVQLKADCNKGYVTVKQI
GVNPTSVDLVDIGKDEEVRMKPGQVLHVVNKLYPYTVQFAEESGKTVTQAEEKIQTDKTP
CEDSSENDDVELVPRKTMKMEVVDTQGSSANCKLSSTSVSPHKGTSNKKEHLGHWSQGLK
SSMQDPKMQVYKDKKTVVIKDKYPKARYHWLILPWDPISSLKSVTRDHLELLEHMHAVGQ
KMVEQCPARESLEFRLGYHAVPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDYFLNSED
VIEMVRSKGKVTVKEHVSELLKLPLRCHHCKKQLSTIPQLKEHLRKHWPK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgcgtgtgtgctggcttgtggggaaagagaaatgcagtcagcggatgaaactgccacac
ttggaagccgtggtgattgggcgtggcccagagactgggataacggataagaagtgttca
cggcagcaagttcagttaaaagcagactgtaacaaggggtatgtcacagttaagcagata
ggagtcaacccaactagtgttgatcttgtggatattggcaaggatgaagaggtgagaatg
aagcccggccaagttctgcatgttgtgaataaactttacccctacacggtgcaatttgct
gaggagtcggggaaaactgttacacaggcagaagagaaaatacagactgataagactccc
tgtgaggactccagtgagaatgatgatgtagagcttgtgcccagaaaaacaatgaagatg
gaggtggtggatacacaaggcagttctgcaaactgcaagctaagcagtaccagtgtatct
ccacataaaggaacttcgaacaaaaaagaacatttaggacactggagtcagggtctgaag
agctccatgcaagatccgaaaatgcaggtttacaaagacaaaaagactgtagtcatcaag
gataaatatcccaaagcacgttaccactggcttatcttaccatgggatcccatttcaagt
ctgaagtcagtcaccagggaccatcttgaactcctggaacatatgcatgcagttgggcag
aagatggtcgaacagtgccctgccagagagagtctggagttcagactgggttaccatgct
gttcccagtatgagtcagctacatttgcatgtaatcagccaggattttgattctccagcc
ctgaaaaccaaaaagcactggaactcttttactacagactacttcttaaactctgaagat
gtgatagagatggtaagaagcaagggaaaagtgacggtgaaagaacatgtctctgaactt
ctcaaattgcccctcagatgccatcattgcaaaaaacagctgtccactatcccacagtta
aaggagcatctcaggaaacattggccaaaatga

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