Antrostomus carolinensis (chuck-will's-widow): 104530006
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Entry
104530006 CDS
T08541
Symbol
ARHGEF5
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 5
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acar04131
]
104530006 (ARHGEF5)
Membrane trafficking [BR:
acar04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104530006 (ARHGEF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
wnt
Motif
Other DBs
NCBI-GeneID:
104530006
NCBI-ProteinID:
XP_010172769
LinkDB
All DBs
Position
Unknown
AA seq
1746 aa
AA seq
DB search
MESEETSEGGTTSPEALSTTGEAWDSAAVKKEHHAPHASAEMSTHPSDSAKGAMLRTPED
CLSAPGEEAEMLSRPSNSVQKAPAGLEQEQADAEPQKGLSEWEGEMFLEEGGLDCSLKLK
QVELVDLESNQDSTSLSTVQDGTAPGNAILQAVDLSPEFSQCQAELAFHGSDPQAQHVKS
PLADAISSQRETPKCFLVCKTISEGHYKAEPFLDTISTDSLQEVDAAAEQKQSNKKVTVE
QPTSEEAAEDMAKPYTSEDGKESIRALEGLEENRESSSSHQLSSTLAGDSQVSSLQAEGN
ISAGETRNSSMVKDQEAVMIPKENSSTSKCLHLEDDHRKTEGRPASPAESAFQVKDTAKK
IEAVNTSQHKEPAQEEAVSELXXXXXXXXXXLLEQGKSLEPKDKKNKEQNEQDQQLQRKE
LKLEALSSAFGSEISSVPRYNVDLRGLENIFLAEETGSAFPLGKPVSVGQHPAEKMLLEA
HVIEASSGCQPPTVSPLSSNNLNPMGETPVAPPHTCHISDQAEDLEDSGRFSIGGHDVGE
ADWDDRTRLGRGDEHSDGHGKTVQRFDNRDAPLHEGVVAPFRAENPEASVPAHSSSGSKN
LEQPDPIDLHLVTENLGKAELSLDFISALPTELTSVASMSGPQQEDDSGTASVTPKDCPG
TSLNKLLDSEEKPVNQAASVQMRDTTSGETGIVCTDPGEADTSHELLTSEEGFPEDLSGP
SSFSVIHKICLPLEGSLAQDRGTVAVIAGPLEPPQTPGRTSTPLNYPETNQQNPLEKSVV
TQGKEMGANVDHEAQQMPLLDQSDCSLNQKESGSRISNVLSTLTWPSEEDIILAVNQQEQ
PLSPVSHSSLPLMSEPDAKQLPHPPSRVQSPSQAQAPALNANHLAQPPALESHQPLAPVP
CSRPHLNHGMDDSKLLAIHPTISHPLWTATSVPDSNTVAPASDGENVPEKDDLVPITGEW
VLSDSGTHDTENSDDSGVSLLAKSFSAVRNEALAGCSDTSPETTDQHMDIQDGKSSPDHP
SWPSLESLITSTDSKSRDSAPPLPMLAFTNPIHFLQLSPPSPPTTRTTCQEEEVSGELRW
VQQAGVFGVDTRHVQAPLAITEKMEGERRVKQRLEGEGEHHLVAQPKEEMPRHSPLEKSS
SWPDKKPNRVVAQEPAANQENPIKRRVKSKDWHRQGLKRTSVPPDILQEIPSVPSEEEAH
KAHREPPVSSETVILREKKPADAMENFKRRHSKLINSSRLLYQEYSDVVLNKAIQSQKRV
DSFSEDIESSFPSSPRLRRKVLSPQDSYLQRLSVSSNASLWQDIPMIRGSRMLLNMSRDE
QKLQEAKFELIMSEASYLRSLNVAVDHFQRSAELQAMLTNQERQWLFSRLHDVRDVSASF
LFDLEEKFEEDMFTFHVCDVALKHAPEFRRVYLPYVTNQTYQEQTFQRLLNGNAGFQQVL
ERLESDPVCQRLSLKSFLILPFQRITRLKLLLQNILKRTRPGSEEEVQATQAYDALEKLI
KDCNENVQRMKSTEELIYLSQKIEFECKIFPLISQSRRLVKCGELTALDFNTLSPKWKVT
TRPIYLHLFNDCLLLSRPKEGGRFVVFDHAAFSDVRGEKCEMKLHGTNKNVFRLFLLQNY
QXXXXXXXXXXXXSKSSSEKLRWISALAPPRGELDLLECPDAPQVQCIKTYKARENDELA
LEKADIIMVMQYSNDGWMEGVKLSDRERGWFPSEHVELISSKHARQKNLKEEQRVKNAKQ
QVFCKK
NT seq
5241 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgaagaaaccagcgagggaggtaccacttctccagaagccctcagcaccact
ggggaagcctgggattctgcagcagtcaaaaaagagcatcatgcccctcatgcttcagct
gaaatgagcacccacccgtctgattctgcaaagggagcaatgctcagaactcctgaggac
tgcctttctgctccaggggaagaagcagagatgctgagcagaccctctaactctgtgcaa
aaagcaccagcaggactggaacaagagcaagctgatgcagagcctcaaaaggggctctca
gaatgggaaggagaaatgtttttagaggagggtggactggattgttctctgaaacttaag
caagtagagctggttgacctggaaagcaaccaggactctacctctctcagcacagtccag
gatgggacagcccctggcaacgccatcctgcaggctgtggacctcagccctgagttttct
cagtgccaggcagaactggcttttcatggctcagaccctcaggcccagcatgtgaaatct
cctttggctgatgccatttcctctcagagagagacacccaagtgcttcttggtgtgtaaa
accatttcagaggggcattataaggctgagccgtttctggatacaatctccacggattct
ttgcaggaggttgatgctgctgcagagcagaagcaaagcaacaaaaaagtgactgttgag
cagcctacctcagaggaagcagcagaggacatggctaagccttacacttctgaagatggt
aaggaaagcataagagcactcgagggtttggaagagaatagagagtcttcctcttcccat
caattgtcttccaccttagcaggtgacagccaagtaagttcactacaagcagaaggaaac
atctcagctggtgaaacaaggaatagcagcatggtcaaagaccaggaagcagtaatgatt
cctaaagaaaactcgtccacttccaaatgccttcatcttgaagatgatcacagaaaaaca
gaaggcagacccgcctctccagcagagagtgccttccaggtgaaggatactgctaaaaaa
attgaagcagtgaatacttcacaacataaggagccagcacaggaggaggcagtgtctgaa
ctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatctgctggaacaaggaaaatctttggag
cccaaagataagaaaaacaaggaacaaaatgagcaggatcaacaactgcaaaggaaagag
cttaaactggaggctctatcatcagcttttgggtcagagatatcttctgttcccaggtat
aatgtggacttgcgtggtttggagaatatttttttggctgaggaaacaggatcagcattt
cctcttgggaaacctgtttctgtgggtcagcatcctgctgagaagatgctgctggaagct
catgtcatagaagcaagttctggatgtcagccacctactgtcagccctctgtcctcaaat
aacctgaacccaatgggtgaaactccagtggcacctccacacacatgccatatctctgac
caggcagaagacctagaagactctggccgcttttccattggtggtcatgatgtgggagaa
gctgactgggatgacaggacaagactgggcaggggggatgagcacagcgatgggcatgga
aagactgtccagaggtttgataatagagatgctccactccatgaaggagtggtagcaccc
tttagagcagagaacccagaggcttctgttccagcacactcttcctctggtagcaagaac
ttagagcaacctgatcccatagatcttcatcttgttacagaaaatttaggaaaagctgag
ctgagcttggacttcatttcagctctacccacagagctcacctctgtggcttcaatgtct
ggcccacagcaagaggatgatagtggaacagcctctgtgactcctaaggactgtcctggc
accagcctgaacaaactgctagactctgaagagaagccagtcaaccaagctgcttccgta
caaatgagggacacaacatcaggggaaactggtattgtatgtactgatccaggggaggcc
gacacttcccatgaactccttacttctgaggaaggctttcctgaagaccttagtggccca
tcttctttctctgtaatacacaagatttgtcttcctctagaggggagccttgctcaggac
agggggactgtggctgtcattgcagggcctctggaaccacctcaaacaccaggcaggact
tcaactcccctgaactacccagaaacaaatcagcaaaaccccctagaaaaaagtgttgtt
acccaaggaaaagaaatgggagcaaatgtggatcatgaagcacaacagatgcctttactt
gatcagtctgattgcagtttaaaccaaaaagagtctggatccagaatctccaatgtcctg
agcaccctaacttggccctctgaagaagatatcatccttgctgtgaaccagcaagaacaa
cctctgtcccctgtgtcccactcaagcctacctctcatgtctgagcctgatgccaaacag
cttcctcatcctccttcccgtgtccaaagccccagtcaagctcaggcccctgcacttaat
gcaaatcaccttgcccaacccccagcccttgaaagccaccagccactggctcctgtaccc
tgctccaggccacatctcaaccatggtatggatgatagtaagttactagccattcatcct
actataagccatcctctctggactgccacctctgtgcctgattctaacactgtggccccc
gcttctgatggagaaaatgtaccagagaaagatgaccttgttcccataactggagagtgg
gttctcagtgactcaggtacccacgatactgagaattctgatgactcaggggtcagtttg
ttggccaaaagcttttctgctgttcgaaatgaggcattggctggctgttctgacaccagc
cctgaaaccacagatcagcacatggatatacaggatggaaaatcctcacctgaccaccct
tcttggccctcgctggaaagcctgataacttccacagactccaagagcagagactctgca
ccgccacttccaatgctagcattcaccaatccaatccacttcctccagctcagccctcca
tcaccaccaaccaccagaacgacctgccaagaagaggaggtctcaggggagctgcgatgg
gtgcaacaggcaggtgtctttggtgtagacacaaggcacgttcaagctccactggcaatc
acagagaaaatggaaggtgagaggagggtcaagcaaaggctggaaggagaaggggaacac
cacttggtagctcagccaaaggaagaaatgcccagacattcacccttggaaaaatcatca
agttggccagacaagaaaccgaacagggtcgttgcacaggagccagcagccaatcaagaa
aacccaattaaacgccgagtaaaaagcaaggactggcaccgtcagggcctgaagagaaca
tcagtaccaccagacatcttgcaggaaatcccttctgttccttcagaggaggaagctcac
aaggctcacagggaaccaccagtcagttcagaaacagttatattgagagagaagaaacct
gcagatgcaatggagaacttcaaacgccggcactccaaactgatcaactcctcaagattg
ctgtatcaggagtacagtgatgtggttctgaacaaggccattcaaagccagaagagagtg
gattctttctcagaggatatagagtcaagtttcccaagctccccaaggctacggaggaaa
gtgctgtctccacaggactcatatttgcaacgtctgtcagtctcatctaatgcgtccctc
tggcaggacatccccatgatacggggcagcagaatgctactgaatatgtcccgtgatgag
cagaagctgcaagaggcaaagtttgagttgataatgtctgaggcttcgtacctgcgcagt
ttgaatgtggcagtggatcacttccagcgatcagcagagctccaggcaatgctcaccaat
caagagcgtcagtggcttttctcccgccttcatgatgtacgcgatgtcagcgccagtttc
ctctttgacttggaggagaaatttgaggaggacatgtttacattccatgtgtgcgatgtg
gctctgaaacatgcccccgagttccgcagggtgtatctaccatatgtaacaaaccagacg
tatcaggagcaaaccttccagcggttactaaatggaaatgcagggttccagcaagtcctg
gagagactggaaagtgatccagtatgccagcgcctctcacttaaatccttcctcatcctc
cctttccagcgcatcactcgactcaaactcctcctacagaatatcctgaagagaactcgg
ccagggtctgaggaggaagtgcaagcaacacaggcctatgatgcacttgaaaagctcatc
aaagattgcaatgaaaatgtccagcgcatgaagagcactgaagagctgatctacctcagc
cagaagattgaatttgagtgcaagatattcccactcatctcacagtcgaggcgacttgtg
aagtgtggtgagttgacagcactggactttaacactctgagtccaaaatggaaagtcacc
acccgtcccatctacctacatcttttcaatgactgtctgctcctgtctcggccgaaggag
ggtggacgttttgttgtgtttgatcatgccgctttctcagatgtgcgtggggagaagtgc
gagatgaaactgcatggaacaaacaaaaatgttttccgtctctttctacttcagaattac
caggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncagtaagagctcaagtgagaag
ctgaggtggatctctgctctggctcctccgcgaggagaactggacctcctggaatgccct
gatgcaccacaggttcaatgcataaagacttacaaggctcgggaaaacgatgagctggct
ttggagaaagcggatatcatcatggttatgcagtacagcaatgatggatggatggaagga
gtaaaactttcagaccgagagagaggctggttcccctcagaacacgtggaactcatctcc
agcaaacatgcgcggcagaagaacctgaaggaggaacaacgtgtgaagaatgccaagcag
caggtcttctgcaagaaataa
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integrated database retrieval system
