Antrostomus carolinensis (chuck-will's-widow): 104530488
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Entry
104530488 CDS
T08541
Symbol
SEC16A
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein Sec16A
KO
K20353
COPII coat assembly protein SEC16
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acar04131
]
104530488 (SEC16A)
Membrane trafficking [BR:
acar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
104530488 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
104530488
NCBI-ProteinID:
XP_028942599
LinkDB
All DBs
Position
Unknown
AA seq
2478 aa
AA seq
DB search
MQQPPQTVPAGAAAPPPAGIARNMYWRNSSLSKRANATAAPVQPVTDPFAFGRQTPQGSH
LDNPSKGNALVMQSSSPAAFPQPAVMHTSPSRAGDNPHGPHTSLSTPVSQPGVNHSTFSN
VPIPSPSPGYVLNSTTEEHPNAELGLRGPAVPLHYNTGAAVENSFSVHPGMVSMSNKPGG
RQDGSRDPNDVPSGPTTTALFPPPPQHPVSQWRPVQGNLQSPVRNFMPCPEPSSQIDVHN
VSQSSVSTSHPPPQPNLQQGLVHQGIPQNIMQAPLPVGCEKNWKNSSANSHHVHNIPPGN
VFRQNAETTNAWLNQPYQEQFYPQPPLQDSSFVIPTAQENNPQNQSPDMSETSNRPVLTD
QDSGTLSMFFKGDETENEEIISSEKNSIVEKTEFDACQPNSASLYHQPGHPQRVATHVLS
QTQTGTGSAHEMVPKGMDVQYFPKVGNRQETGAAKHSLFVSGDKARVGDMSGSGGSQYEN
VENLECIQNQEVLPSEPQNISASSPAAGPDPYRYGSFPGQMLPKNAVVSHAEGGPNLEAP
DSLPHPVRPDSVSSNYSSISHRSASSSARPQEQVGTFIQQESGKPDEESSASFFKQIDSS
PLGGDSSELNLGKNYHGNLSQPPTPSPPKPTGVFQTSANSSFEPVRSHGVGIKPAEIDQA
KMVVELRENHSNQKNIKKNTAVPAASPGNLEQPPDNLETIFMPQVHPLPLAVTGEAGNML
HSGPVMANIQSVSERRSSTRAQGAVKKCDSPATTLWAHDELPNFGGNVLLAPAAPAVYVP
AKQTVEVIQPPEEGLCNQQPSKPGTISVQLSQGGNISSENLENPPKMGEEEALQSQASSG
YASLLSSPPTESLQNQPILIAQPNQSYNLAQPINFSISLSNQLSSNENNQPMKDCGVGDK
PGMGPQASHAGGIISGENTPLPVMQVGSLLVNALPNTHLLKHNLLQSPVNSSDTASNQPA
NLVVKTPLNLAPEGQKNVNVEGFVPEFAGKPGSNSSVSPGTNLPSGSASALVTPVNSVVQ
ANNSADHSNSKEEAAGVLDFTVSRTLEKSSASNSVQVHNQSLSCGPVYPQQSAGSAGQVG
PETHDKQHFYQQVTKDVQHQAVSESTVQGALPSQPQMQAAQVQQPTSSGQSSVPSNYQMA
AGTKAMQASQQRENQVLGDRPHPLGPQEASSAQLTTGYDQTSPDKPPASGQPSSAPTSTA
SSTTTSQSVMPNMQQDLQRPPLPQTPQDAFGPPQNPYYYYRHPYDAYQPPYPPPYPPADP
RTAAHLYYMDDSYGQYDPRYRHYDSSGTAYMEPGSYRYSEPERPSSRASHCSDRPPSRQG
YTEDYYTKSGWSDYYPGYYPNSYDYGDPSRWERYSSAYDPRYRDPRSYDQRYWYDAEHNP
YQKREAYPYGNRHDRYEDNWRYDPRFTGSFDDESEPHRDPYGDEFDRRSVHSEHSGHSLR
SSRSVHSHQSSFSSRSQQSQLYRSNHDLTANTYETTAQAASLHTDYPYGGYAANFDGQQP
FTDYGYPTETGWSAVEQAPLRPSTPEKFSVPHICARFGPGGFLIKVLPNLPSEGQPALVE
IHSMETMLQHSPEQEEMRAFPGPLAKDDTHKVDVINFAQNKATQCFKNENLIDKESASLL
WDFIVLLCRQNGTVVGTDLAELLLRDHKTVWLPGKSPNEANLIDFTNEALEQVEEESGEA
QLSFLTDSLITTIDSLEKETERFRELLLYGRKKDALESAMKHGLWGHALLLASKMDSRTH
ARVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLTNNVDL
ESRTIATMGDTLASKGLLDAAHFCYLMAQVGFGVYTRKTTKLVLIGSNHSLPFFKFATNE
AIQRTEAYEYAQSLGAQPGCLPNFQVFKFIYACRLAEMGLAAQAFHYCEVISRTVLKDPH
YYSPVLIGQLIQMSSQLRLFDPQIKEKPEQESFLEPSWLVRLRHVDGQIKAGAISYNTDR
STPAPYACSTPSSELDHASQCDGAGVGRDVGPGAENALLASLLPSMAQQMQSVQLMPSVP
QAVLDGSAAMIPPGDQEAVRSVPFYSVASQPVGPGPGFVPPGFSNPYGTEPSPLYLGSTL
PQGGPPQETEPRSEEQTNLETGMQRIAPESPSEKKSFPEQREEDFYGRMASMAPGRRSQS
ASQSSAHMGYGPRSRTTSESSAHSVGRERSSSAAKQPSPSPSVPVGXXXXXXXXXPRKVN
FLRKTGANWFRWLMGKGKNEAHLPDDKNKSIVWDEQKQRWVNLDEPEEESKPPPPPPTGF
PKVPQTVPPGPGGPPSAPVNVFSRRAAGSRARYVDVLNPGGTKSSGAVPAPSDLFAPLAP
MPIPANVFVPNSVPGETQPMEGSGAAEHTPAADQTNTDPAAAVEQEYLNPAILPPGSELP
VSNPDGSQSGELSRSSSMSSLSREVSQHFNQPTTVPPPGGPSAGSVPFYNPSQFAQSPAA
TGSSRLGRIGQRKYPTLK
NT seq
7437 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctccacagactgtcccagcaggagcagcagctccacctcctgcaggcatt
gctcggaacatgtactggagaaacagctcgctcagtaaacgagcaaatgcaacagctgcc
ccagtacagcctgtgacagacccttttgcgtttggcagacagactccacagggttcccat
ttagataatccatccaagggcaatgcattggttatgcaaagttcttccccagcggcgttt
ccgcagccagccgttatgcatacttcaccatcacgtgcaggggacaatcctcatggaccg
catacgtctctatccacccctgtttctcaaccaggagtaaatcacagtacgttttctaat
gttccaattccctcgccgtccccagggtatgttctaaatagtactacagaagagcatccc
aatgcagagcttggactccgtgggcctgcagtaccgttgcattataatacaggagctgca
gttgaaaattcttttagtgtgcaccctggaatggtgtctatgtcaaataaacctggaggt
agacaagatggtagtagagatccaaatgatgttccttcaggacccactacaacagcactc
ttccctccacctcctcagcatcctgtgtctcagtggaggcctgttcaaggtaacctgcag
tctccggttcgaaatttcatgccctgtcctgagccgtcttctcagattgatgttcataat
gtttctcagtcttctgttagcacttctcatcctcctccacagccaaatttacagcagggt
cttgtacaccaaggtattccacaaaatatcatgcaagcgcctttacctgttggttgtgaa
aagaactggaagaacagctctgcaaatagtcatcacgtgcacaacatcccgcctggaaac
gtgtttaggcagaacgcagaaacgactaacgcttggttaaatcaaccctaccaggaacag
ttttacccacagccaccattgcaagactccagttttgtcattcccacagctcaggaaaat
aacccccaaaaccaatctccagatatgtcggaaacatcaaacagacctgttcttacagat
caagattcaggaactctctccatgtttttcaaaggggatgagactgaaaacgaagaaatc
atttcatctgaaaaaaattccatagttgagaaaacagagtttgatgcttgtcagccaaat
tctgcatccttgtatcaccagccagggcatcctcagcgggttgcaactcatgttctctct
cagacacagactggtacaggttcagcccatgagatggtaccaaaaggaatggatgtccag
tactttcctaaagttggaaatcggcaggagacaggggctgctaagcactctctgtttgtt
agtggtgacaaggcccgtgtaggtgacatgtctgggagcggtgggtcgcagtatgaaaac
gttgagaacctggagtgcattcagaatcaggaggtgctgcccagtgagccacagaacatc
agtgcttcatcccccgctgccggtcctgatccgtacagatacggatcttttccaggtcag
atgcttccaaagaatgctgttgtgagccatgctgaaggaggaccaaatttggaggcacct
gattcattacctcatcctgtccgaccagatagtgtatcttcaaactatagcagcattagc
cataggagcgcttctagctcagcaagacctcaagagcaagtcggcacatttattcagcaa
gaaagtgggaagcctgatgaagaatcttctgctagcttcttcaaacagattgactcctct
cctttgggaggcgattcaagtgagctaaacctgggcaagaactaccatggtaatctatct
cagcctccaactccaagtcctcctaagcctacaggagtatttcagacaagtgcaaatagt
tcctttgaacctgtgaggtctcatggagttggtataaaacccgcagagattgaccaagca
aagatggtggttgaattaagagagaaccactccaaccaaaagaatatcaagaagaacaca
gctgtgccagctgcgtccccaggcaatcttgaacagccaccagataatctggaaactatt
tttatgcctcaggtacacccactgcctcttgcagtcactggtgaagctggaaatatgttg
cactctggacctgttatggcaaacatacaatcagtatctgagagaagatcctcaacgaga
gctcagggagcagttaagaagtgtgatagcccagcaacaactttgtgggctcacgatgag
ttacctaattttgggggaaatgttcttctagctcctgctgctccagcagtgtatgtacct
gccaaacaaactgtagaagtcattcagccaccagaagaaggcctgtgtaatcaacagcca
agtaaaccagggactatttctgtgcagctttcacaaggtgggaatatatcttctgaaaat
cttgagaatcctcccaaaatgggagaagaggaggcacttcagtctcaggcaagttctggt
tatgcaagtttactgtcttctccacctacagaatctttgcaaaatcagcctatcctgatt
gctcagcctaatcaaagctataacttggctcagccaattaatttttctatttctctatct
aatcagctaagcagcaatgaaaacaatcagccaatgaaggactgtggggttggggacaag
cctggaatgggtccccaagcttcacatgctggtgggatcatttctggggaaaacacgcca
ttacctgtgatgcaagttggatctctattagttaacgcacttccaaatactcatctgtta
aaacataatttgttacaaagccctgttaattcctctgatactgcttctaatcaacctgca
aacttggttgtgaaaactccgcttaatttggctccagaagggcaaaagaatgttaatgtg
gaaggttttgttcctgaatttgctggcaagccagggtctaactcatccgtttctcctggg
acaaacctccccagtggaagtgcaagtgcactagtcacccctgttaattctgtagtacag
gctaataattctgcagatcattcaaatagcaaagaagaagctgctggagtgctcgacttc
acagtatcacggacgctggagaaaagcagtgcaagtaattctgtgcaggtgcataatcag
tcactttcttgtggtccagtatatcctcaacagtcagctggtagcgctggtcaggtgggt
cctgagacacatgacaaacaacatttctatcaacaggtgacaaaagatgtacagcatcag
gctgtatcagagagcactgtacagggagcgttgccatctcagccacaaatgcaggcagct
caggtgcagcaaccaacatcatcggggcagtcctcagttccttcaaactaccagatggct
gcaggaactaaagccatgcaggcatcacagcagcgtgagaaccaggtgctgggtgaccgt
cctcatcctctgggtccccaagaggcgagttcagcacagctgacaacagggtacgatcag
accagtcctgataaaccaccagcatctggacagccatcgagtgctccaacttccacagcc
tcttctaccaccacgagtcaatcagtcatgccaaacatgcaacaagacctgcagcgtccc
cccctgcctcaaactcctcaggatgcctttggtccaccccagaacccttactactactat
agacacccttacgatgcttaccagcctccgtatccaccaccttatcctcctgcagacccc
aggacagcagctcatctttattacatggacgatagctatggacagtatgacccacggtac
agacactacgatagcagcggtactgcttatatggagcctgggagctatcggtattctgag
cctgaacgtcctagttccagggctagtcactgctctgacaggccgccttcgagacaaggg
tatactgaagattattacaccaaaagtggatggagtgattattatccaggctattaccca
aactcatatgattatggagatccaagtcgctgggaacgttactcatcagcttacgatccc
agatacagagatcctagaagctatgaccagagatactggtatgatgctgaacacaaccct
taccagaagagagaagcgtatccatatggcaacagacatgaccgttatgaagataactgg
agatatgatcctcgttttactggaagttttgatgatgaatctgaaccccacagagatcct
tatggtgatgaatttgatagacgcagtgtccacagtgagcattctggtcacagtctccgt
agctcccgcagtgttcacagtcaccagagtagtttcagctctcgctctcaacaaagccag
ctgtatagaagtaatcatgatctaacggctaatacgtatgaaactactgcgcaggcagcg
tcgctccacacagattatccatatggcggatatgctgctaactttgatggacaacagccc
tttacagattatggctacccgactgaaactggatggtcagctgtagaacaagcaccttta
aggccctcaacgcctgagaaattttcagtgcctcatatctgtgctaggtttggtcctggc
ggcttcctaataaaagtgctgccaaacctgccttcagaaggacagccagctctggttgaa
atacacagtatggagactatgttacaacattctccagagcaagaagagatgagagcgttt
cctggtcctcttgctaaggatgacacccataaagtggatgttattaattttgcacaaaat
aaagctacacagtgctttaagaatgaaaatttaattgacaaagaatctgcaagtctgctt
tgggactttattgtactgttgtgcaggcaaaatgggactgttgtgggaacagacctggct
gagcttttgcttcgagaccataaaacagtgtggcttcctgggaagtcccctaatgaggca
aatttgattgatttcactaatgaggctttggaacaagtggaagaggaatctggtgaagcc
cagctctcatttctcactgacagtcttataaccacaattgacagtcttgagaaagagaca
gagagattcagagaattgctgctttatggcaggaagaaggatgctttggagtctgccatg
aagcatggtttgtggggtcatgctctgctacttgccagcaaaatggacagcagaacacat
gcgagagttatgaccagatttgccaacagcctcccaattaatgaccctctgcagactgtt
taccagctgatgtctggaaggatgccagctgcatccacgtgctgtggagatgagaaatgg
ggagactggaggcctcatctagcaatggtgttatccaacttgaccaataatgtggacttg
gaatccaggaccattgctaccatgggagacactcttgcttctaaaggcctgctggatgct
gctcatttttgttaccttatggcccaagttggttttggagtttacacaagaaagacaaca
aagcttgtcctaattggatcaaatcatagcttgccattttttaagtttgccaccaatgaa
gccattcaaagaacagaagcctatgaatatgcacagtcactaggagctcagcctggctgc
ttacccaatttccaggttttcaagttcatctacgcttgccgactagctgaaatgggactt
gctgctcaggctttccattattgtgaagtgatttccagaactgtccttaaagatccacat
tactattcacctgtacttattggccagctaattcagatgtcgtcacaactgcgcctgttt
gacccgcagataaaagaaaaaccagaacaggagtcttttcttgaaccttcatggttagta
aggcttcgacatgtggatggacagatcaaggcaggtgcaatatcttataacacagacaga
tccacgccagcaccatatgcatgtagtacaccaagctctgaattagaccacgctagtcaa
tgtgatggagcaggagttggccgtgacgtgggtccaggtgctgaaaatgcattgttagcg
tccttattacccagtatggctcaacagatgcagagtgtgcagctgatgccttcagtacct
caggctgtccttgatgggtcagctgctatgattcctcctggtgaccaggaagctgtccga
agtgtccctttctattcagtggcttctcagcctgttggtccaggacctggctttgtacct
ccaggattttcaaatccgtatggaactgaaccatcaccactgtatttagggtcaacacta
ccacaaggagggccaccacaagaaactgaaccacggtcagaagagcagacaaacctggaa
acaggaatgcagagaattgccccggagtctccttcagaaaaaaaatctttccctgaacag
agagaggaggatttctatggcagaatggctagcatggcaccaggacgaagatcccagtct
gcatctcagtcttcagcacatatgggctacgggccaagatcccgaacaacgtcagagtcc
tctgctcattctgtgggacgagagagatccagctctgcagccaaacagccctctccttct
ccctctgttcctgtaggnnnnnnnnnnnnnnnnnnnnnnnnnncacctagaaaggtaaac
tttctaagaaagactggtgcaaactggtttcgttggctgatgggaaaaggaaagaatgaa
gctcaccttccagatgacaagaacaaatcaattgtttgggatgaacagaaacagcgctgg
gttaacctggatgaaccagaagaagagagtaagcctccaccaccacctccaacaggattt
cctaaagttcctcagactgttccacctggacctggaggcccacctagtgcccctgtcaac
gtgttctccagaagagcagctggaagcagagcccgttacgttgatgtcctgaatccaggt
ggaaccaagtcaagtggtgctgttcctgcaccatcagacctatttgcccccttggcacca
atgccaattcccgcaaatgtatttgttccaaactcagttccaggagaaacccagccaatg
gaagggagtggtgcagcagagcacacaccagctgcagatcaaaccaacacagatcctgct
gcagctgttgaacaagagtatttaaaccctgcaatccttcctcctggatctgaacttcct
gtttctaaccctgatggctcccaatcaggcgagctttcgcgctctagttcaatgagttca
ttatcacgtgaagtaagccagcattttaatcagccgaccactgtaccacctccgggggga
ccttcagcgggatcagtaccgttctacaatccttctcaatttgcacaatctcctgcagcc
actggaagttcaaggctgggaagaattggacagaggaagtatccaacattgaagtag
DBGET
integrated database retrieval system
