Antrostomus carolinensis (chuck-will's-widow): 104530827
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Entry
104530827 CDS
T08541
Symbol
ABCA1
Name
(RefSeq) ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar02010
ABC transporters
acar04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104530827 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104530827 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
acar02000
]
104530827 (ABCA1)
Transporters [BR:
acar02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104530827 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
R1_ABCA1
AAA_23
Motif
Other DBs
NCBI-GeneID:
104530827
NCBI-ProteinID:
XP_010173834
LinkDB
All DBs
Position
Unknown
AA seq
1531 aa
AA seq
DB search
LLSMKSWSDMRQEVMFLTNVNASNSSTQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYK
ALFGGNSTEDDVTNFYDNSTTPYCNELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPA
VRKVMTEVNRTFQELGVFRDLGGMWEEISPKIWTFMESSQEMNLIRTLLKGKALWDLHLP
SSNWTVEDVARFLSNHPEDFEMANDSVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVA
TEVRLINKSLELLDERRFWAGIVFTEIAPNSIELPQHVKYKIRMDIDNVERTNKIKDGYW
DPGPRADPFEDMRYVWGGFAYLQDVVEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLR
VMSRSMPLFMTLAWIYSVAVIIKGIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLL
MSAGLLVLILKMGNLLPYSDPSVVFVFLLIFGVVTILQCFLISTVFSRANLAAACGGIVY
FTLYLPYVLCVAWQDYVSFSLKIFASLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPL
EEDSFSITTSAVMMLFDTFLYGVMTWYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQ
HPHPDQKGPSEVCKEEEPMHLSLGVSIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGH
NGAGKTTTMSILTGLFPPTSGTAFILGKDIRSELSTIRQNLGVCPQHNVLFDSLTVEEHI
WFYARLKGLPEKKVKEEMEQMAIDVGLPHKLKSRTSKLSGGMQRKLSVALAFVGGSKVVI
LDEPTAGVDPYSRRGIWELLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSS
LFLKNQLGTGYYLTLVKKDVDSSLSSCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDT
LTIDVSAISNLITKHVPEARLVEDIGHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGIS
SYGISETTLEEIFLKVADDSGVDAETSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPND
SDVDPESRETDLLSGMDGKGSYQMKGWKLTQQQFMALLWKRLLIAKRSRKGFFAQIVLPA
VFVCIALMFSLIVPPFGKYPSLELQPWMYDEQYTFISNDAPEDAGTQRLLDALLNKPGFG
TRCMQGHSIPDTPCTMGQREWTTASVPDSVLDIFLKGNWSMENPSPSCECSNEKIKKMLP
VCPPGAGGLPPPQREQDTADILQNLTGRNISDYLVKTYVQIIGKSLKNKIWVNEFRYGGF
SLGASSSLMLPPNHEVTDAIKQVKKILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFN
NKGWHAIASFLNVINNAILRASLQQDKNPSAYGITAFNHPLNLTKQQLSEVALMTTSVDV
LVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPAT
LVIIIFICFQQKSYVSSSNLPVLALLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNL
FIGINGSVATFVLELFTNNVCLPRASSLSVI
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
ttgctgagcatgaagagctggagtgacatgaggcaagaggtgatgttcctgaccaacgtg
aatgcctcaaactcctctacgcagatctaccaggctgtgtcgcgcattgtgtgtggccat
cccgaaggtggagggctcaaaattaaatccctcaactggtatgaggataacaattacaaa
gcactttttggaggcaatagcactgaagacgatgtaactaacttctatgataactccaca
acaccctactgcaatgagctcatgaagaacctggaatccagcccactttccaggattatc
tggagggctttgaaacccttgctgattgggaagatcttgtacactccagacacaccagcc
gtaaggaaggtcatgactgaggtgaacaggacattccaggagctgggtgtgtttcgtgac
cttggggggatgtgggaggagataagcccgaagatttggacgtttatggaaagcagtcag
gaaatgaatctcattcggactttgctgaaagggaaagctctctgggacctgcacttgcca
tcttccaactggacagtggaagacgttgcccgtttcctgtcaaaccatccagaggacttt
gagatggcaaatgactcagtatatacctgggtggatgccttcaatgagacagaccgggct
atccagaccatctcccgcttcatggagtgtgtcaacttggacaaactggagcctgtggcc
acagaagtccggctcataaacaagtcattggagcttctggatgaaaggagattctgggct
ggcatagtcttcacagaaatagctcctaacagcatagagctccctcaacatgtgaaatac
aagatacgcatggacattgataatgtggaaaggaccaacaagatcaaggatgggtactgg
gatcctggtccccgtgctgatccctttgaggacatgcgctatgtttggggaggctttgcc
tacctgcaggatgtggtggaacaggccatcatcagggtgcagactggcacagagaagaag
acaggagtttatgtgcagcagatgccctatccctgttacgtggatgacatatttctgcgt
gtcatgagccgctccatgcctctcttcatgactctagcctggatctactcagtggctgtg
ataattaagggcattgtgtatgagaaggaagcccggctgaaggaaacgatgaggataatg
ggacttgacaatggtatcctctggctaagctggttcattagcagcctcatccctctcctg
atgagtgcaggcctgctggtgctgattcttaagatggggaatctgctgccttacagtgac
ccgagcgtggtgtttgttttcctcttgatcttcggtgttgtgaccatcctccagtgcttc
ctcatcagcaccgtgttctccagggccaacctggcagctgcctgtgggggcattgtctat
ttcacgctgtacctgccttatgtgctgtgtgttgcctggcaggactatgtcagcttctca
ctaaagatctttgcgagcctgctgtctccagtcgcctttggctttggttgtgagtacttt
gccctgtttgaggagcagggagttggtgttcagtgggacaacttctttgagagcccattg
gaagaagatagctttagcatcaccacatctgctgtcatgatgttatttgacaccttcctg
tatggggtcatgacatggtacattgagtctgtcttcccaggccagtatgggattcccagg
ccctggtactttcctttcacaaaatcctattggtttggcgaggaaccacaggacaggcag
caccctcatcctgaccagaaggggccttcagaagtctgcaaggaggaagagcctatgcat
ctgagccttggtgtttccatccagaacctggtcaaggtttatcgtgacggcaagaaagtt
gctgtagatggtctcacactgaacttctatgaaggacaaatcacctcctttctgggacat
aatggagcagggaagaccactaccatgtccatcttgactggcttgttccccccaacctcg
ggtacagccttcatcctgggcaaagatatccgctctgagctcagcaccatcaggcagaac
ctgggtgtctgtccgcaacacaatgtgctgtttgactcgctgactgtggaggagcacatc
tggttctacgctcggctcaaaggacttccagaaaagaaggtgaaagaggagatggagcag
atggcaatagatgtcggtttgcctcacaaactgaaatcgaggacaagcaaactctctggt
ggcatgcagaggaagctctcagttgccttagcctttgttggtggctccaaggttgtcatt
ctggatgagcccacagctggcgtggatccttattctcgcagagggatatgggaattgctc
ctgaagtatcggcaaggtcgcactatcattctctccacgcaccacatggatgaggcagac
attctaggggaccgaattgccataatttctcatggcaagctctgctgtgttggctcttct
ctcttcctgaagaaccagctgggaacaggctattatttaaccctggtcaagaaggatgtg
gattcctctctgagctcctgccgaaacagcagcagcacagtgtcctatctgaaaaaggat
gacagtgtctcccagagcagctctgatgctggccttggcagtgaccatgaaagtgataca
ctgacaatagatgtctctgcaatttcaaatctgattacaaaacatgttcctgaggccagg
ctggtggaagacattggccatgaattaacctatgtcttgccatacaaggctgctaaagaa
ggagcttttgtagagctgttccatgaaattgatgaccgtctctctgatcttggcatttcc
agctacgggatctctgaaaccaccttggaggagatcttcctgaaagtggctgatgatagc
ggtgtggatgcagaaacctcagatgggacattgccagccagaaggaacagacgtgtgttt
ggagacagacagagctgcctccgtccatttacagaagacgatgcatttgatcctaatgat
tcagacgtagatccagaatccagagagacagaccttctcagtggcatggatgggaaagga
tcctaccagatgaagggctggaagctcacccagcagcagttcatggctctgttgtggaag
agactgcttattgctaagagaagccggaagggcttctttgctcagattgtgctgccagct
gtctttgtgtgtattgctctcatgttcagcctgatcgttcctccctttgggaagtatcca
agcctggaactacagccctggatgtatgatgagcagtacacttttattagcaatgatgct
ccagaagatgcaggcactcagaggcttttggacgcccttcttaataagcctggttttggg
acacgctgtatgcagggacactccatcccagacactccttgcaccatggggcagagggaa
tggactaccgcttcagtcccagactcagtcctggacatcttcttgaagggcaactggagc
atggagaacccttcaccgtcttgtgaatgcagcaatgagaagatcaagaagatgctgcct
gtgtgcccccctggtgcaggcgggctgccacccccacagcgtgagcaagacactgctgac
atcctccagaatctgacaggccgcaacatatcggactacctagtgaagacctacgtgcag
atcattgggaaaagcttaaagaataagatctgggtgaatgagttcaggtatggtggcttt
tccttgggagccagcagttccctcatgcttcctccaaaccatgaagtcactgatgccatt
aaacaggtgaagaaaatcttggagctagcacaggggagctctggagatcggtttctcaac
agcttgtcaagtttcatgaaaggcctggatacaaagaacaatgtcaaggtgtggttcaac
aacaagggctggcatgccatcgcctccttcctgaatgtgatcaacaatgccatccttcgg
gccagcctgcagcaggacaaaaatcctagtgcttatgggatcactgctttcaatcaccca
ctgaacctcaccaagcaacagctctctgaagtggccctgatgaccacctccgtggatgtc
ctagtctccatctgtgtgatctttgccatgtcctttgttcctgccagctttgtggtcttc
cttatccaggaacgtgtcagcaaggctaaacacttgcagttcatcagtggtgtcaagcct
gtcatctactggctggccaactttgtctgggatatgtgcaactacattgttccagccaca
ctagtcatcatcatcttcatctgcttccagcagaagtcctatgtatcctcctccaacttg
cctgtactggctctccttctgtttctctatgggtggtccatcacccctctcatgtatcca
gcctccttcgtgttcaaaatccccagcacagcatatgttgtgctgaccagcgtgaacctc
ttcattggcatcaatggtagtgtggccaccttcgtcctggagctcttcaccaacaacgta
tgtttgcccagagcctcctctctgtctgtgatctag
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integrated database retrieval system
