Antrostomus carolinensis (chuck-will's-widow): 104530938
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Entry
104530938 CDS
T08541
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04510
Focal adhesion
acar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104530938 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104530938 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
ATG17_like
LAMB1
OVT1
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
104530938
NCBI-ProteinID:
XP_028942755
LinkDB
All DBs
Position
Unknown
AA seq
1714 aa
AA seq
DB search
MLIILLFQEDKKCFICDSEDPFHGTLNPDSHRIENVVTTFAPNRLKLWWQSENGLENVTI
QLNLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWQVYRYFAYDCESSFPGISTGPMK
KVDDIICDSRYSDIEPSTEGEVIYRVLDPAFRIEDPYSPRIQNLLKITNLRVKFIKLHTL
GDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMCRHN
TKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNGHSSQCHFDMAVYMTTGNTSGGVCD
DCQHNTIGRNCEQCKPFYFQHPERDLRDPDVCEPCNCDPAGSQNGGICDRYTDFSTGLIA
GQCRCKLFVEGERCDLCKEGFYGLSADDPAGCQSCACNPLGTHPGGNPCDSETGNCYCKR
LVTGKQCDHCLPEHWGLSNDMDGCRPCDCDQGGALNNNCSSESGQCECRPHMFGRQCNQV
EPGYYFISLDHYIYEAEEANLGPGVNIIERQYTPDRTPSWTGIGFVRVPEGAYLEFYIDN
IPYSMEYDILIRYEPQLPDQWEKAVISVSRPGKIPTGSRCGNTVPDDDNQVVSLSPGSRY
VVLPRPVCFEKGLNYTIRLELPQYSSVDTETESPYTLIDSLVLMPYCKSLDIFTVGGSGE
DVVTNSAWETFQRYRCLENSRSVVKTPMTDVCKNIIFSISALLHETALSCQCDPQGSLSS
VCDPSGGQCQCRPNVVGRQCDRCAPGTFGFGPSGCRPCECHIQGSYNAFCDAETGQCHCF
PGVYGRQCDXXXXXXXXXXXXHCSGHADDCSPYTGECLSCRDHTAGHNCERCMAGYYGDP
VLGSGDHCRPCPCPDGPESGRQFSSGCYQDPVTLQVVCVCSVGYIGSRCDECASGFFGNP
DEVGGACQPCQCNNNIDTTDPEACDKKTGMCMKCLYHTEGENCHLCKQGYFGSALQQDCR
KMGVVGCEGSESCRCEAATGQCRCLPNVVGQTCDRCAPHTWRLASGAGCEQCGCDPVRSL
GPACNEFTGQCQCMPGFGGRTCRECQELFWGDPGVECQACDCNPHGIQTPQCDRATGQCI
CNEGVEGPRCDKCSRGYSGFFPNCVPCHQCFALWDVVISELANRTQQFLDRANALKITGV
TGPYQQTLNTLEEKLSEIKTIIAQNPAAEPLKNIGNLFEEAEKLTADVTVKIADIEENLS
ALAVKSNSTDTDLSVLETDAKSLDRVVKELAEQLEFIKISDVRGALDSITKYFQMSLEAE
ERVNASTVHPDSAVELSAQTRQEVEDLINEKEAQFKAKQEEQSRLLDELAGKLQSLDLSE
VAEKTCGTPAGASCAESECGGLNCRTDEGKKKCGGPGCDGLVTVAHNAWQKAMDFDRDIL
SALAEVEQLSRMVSEAKQRADEAKQNAQAVLLKTNATKEQVDRSNEDLRNLIKQIRDFLM
QDSADLDSIEAVANEVLNMEMPSTPQQLQALTEDIRERVESLSDVEVILQQSAGDIARAE
MLLEEAKKASKGATDVKVTADMVKAALEEAEKAQNAAEKAIKQADEDIKGTQDLLTSIES
ENAASEETLNNATLRLFELEKSVEDLKQKAATNSENVDNIEEKIVSAKQNAEEVKKVLNT
ELNDKYKTVEDLIAKKTEESADARRKAGMLQDEAKALLAQANSKLQLLKDLENTYESNQK
VLEDKAKQLVELEETVRSLLQTISQKVAVYSTCL
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atgctgattattttattgtttcaggaggacaaaaaatgtttcatatgtgactccgaggat
cccttccatggtactctcaatcctgacagccatcgtatcgaaaacgtggtcaccacattc
gctccaaatcgcctgaagctctggtggcagtcggaaaatggtttggaaaacgtgactata
cagctgaacctggaagccgagtttcatttcactcatctcattatgaccttcaagacattc
cgtcctgctgcaatgttgatagaaagatcatctgattttggaaaaacgtggcaagtgtat
cggtattttgcatatgactgtgagagctcatttcctggaatttcaactggacctatgaag
aaagtggatgatatcatttgtgattcccgatactctgacattgaaccttcaacggaggga
gaggtaatatatcgtgttttagatcctgcttttcgtattgaagatccatacagtccacgg
attcaaaacctgttaaagatcacaaatctgagagtcaaattcatcaagctgcacacactg
ggagataatctcttggattcaaggatggagattagagaaaagtactactatgccatctac
gatatggtggttcgtgggaactgcttctgctacggacacgccagcgagtgtgcgccagtg
gatggctttaatgaagaagtggaaggaatggtccatgggcactgcatgtgcagacataac
accaaagggttaaactgtgaacagtgtttggatttctaccatgacttaccctggcgaccc
gctgaaggccgcaatagtaatgcgtgcaaaaagtgcaactgcaatggccactccagccag
tgccactttgacatggctgtgtacatgacgacggggaataccagcgggggagtgtgtgac
gactgccagcacaacaccataggacgcaactgcgagcagtgcaagcccttctacttccag
cacccggagagagatctgcgggaccctgacgtctgtgagccttgcaactgtgacccagct
ggctcccaaaatggtggcatctgcgatcgctacactgatttctccactggcctcattgct
ggacaatgccgttgtaaattatttgtcgaaggggagcgttgtgacctctgcaaagaaggt
ttctatggcctgagtgctgatgacccagcgggttgtcagtcttgtgcgtgtaatcctctg
ggtacccacccaggggggaatccttgtgattctgagacaggaaactgctattgtaagcgc
ctggtgacaggaaagcagtgtgatcactgcctgcctgagcactggggcctgagcaacgac
atggatggctgtcggccttgcgactgcgaccagggaggagcgctgaacaacaactgctcg
agtgaatctggccagtgtgaatgccggccccacatgtttggacgtcagtgcaaccaggtg
gagcctggctattacttcatttcgcttgatcattacatctatgaggcggaggaagccaac
ttgggtcccggagtaaacatcatagagcgccagtacacgccagatcgcacaccatcgtgg
acgggcataggatttgtaagggtccctgagggggcatacctggagttctacatcgacaac
atcccctactccatggagtatgatattctgatccgctacgagccacagttgccggatcag
tgggaaaaagctgtgatcagcgtctcgcgcccaggcaagattcccacgggtagccgatgt
ggcaatacagttcccgatgatgataatcaggtcgtctcactgtcacctggctccagatac
gttgttctcccacggcctgtctgcttcgagaagggtctgaattacaccatccgcctggag
ctgccccagtactcctcagtggatacggagacggagagcccatacacactcattgactct
ctggttcttatgccatactgcaaatcgctggacatattcacagtgggaggctcaggtgaa
gatgtggtcacaaacagtgcctgggaaactttccaaagatacaggtgtctggaaaacagc
aggagtgttgtgaaaacccccatgacggatgtctgcaagaacatcatattcagcatttct
gccctattacacgagactgcgttatcgtgccagtgtgatccccagggctccctgagttca
gtgtgcgaccccagcggaggacagtgccagtgtcgtcccaacgtcgtcggaagacagtgc
gacagatgcgcccctggcacctttggattcgggccgagtggatgccgaccgtgtgagtgc
cacatccaaggctcctacaacgccttctgcgacgcggaaacgggccagtgccactgcttc
cccggggtgtacgggcgacagtgcgacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnncactgcagcggccacgctgacgactgcagcccctacaccggggagtgcctgagctgc
cgggaccacacagctgggcacaactgcgagaggtgcatggctggctactatggagacccc
gtcctgggatcgggtgaccactgccgcccctgcccttgccctgatggccccgagagcgga
cgccagttttccagcggctgttaccaggatccggtcacactgcaagtcgtgtgtgtctgt
agcgtgggatacataggcagtcgatgtgatgaatgtgcgtctggcttctttgggaacccc
gacgaggttggcggcgcctgccagccgtgccagtgcaacaacaacatcgacaccactgac
cctgaggcttgcgacaagaagacgggaatgtgcatgaagtgcctgtatcacacagagggt
gaaaactgccatctctgcaaacagggctactttggaagcgccctgcaacaggactgcaga
aagatgggggtggtaggctgcgagggctcggagagctgccggtgcgaggcggccacgggg
cagtgccggtgcctccccaacgtggtggggcagacctgcgaccgctgtgccccccacacc
tggagactcgccagcggggccggctgcgagcagtgtggctgtgaccccgtgcgctccctt
gggcctgcctgcaacgagttcacagggcagtgtcagtgcatgccgggcttcggaggccgg
acctgccgggagtgccaggagctcttctggggcgacccgggtgtggagtgccaagcatgt
gattgcaatcctcatggcatccagaccccgcagtgtgaccgtgccaccgggcagtgcatc
tgcaatgaaggggtggaagggccgcgctgtgacaagtgctctcggggctactcgggcttc
ttccccaactgcgtgccttgccaccagtgctttgccctctgggacgtggtcatcagcgag
ctggctaataggacccagcagttcctggatagggctaatgccctgaaaatcactggagtc
actggaccataccagcagacactcaacactctggaggagaagctcagtgaaatcaaaacc
atcattgctcaaaatccagctgccgagcccctgaagaacattgggaatctctttgaggaa
gcagaaaagctgacagcagatgttacagttaagatagccgacatagaagaaaacctgtca
gccttagcagtgaagagcaatagcacagacactgacctgagtgtgctggagacagatgcc
aaaagcctagaccgtgtcgtgaaagaacttgcagaacagctagagttcatcaagatctct
gatgttcggggagccttggatagtatcaccaagtatttccagatgtccctggaggcagag
gagagggtcaatgcctccactgttcaccccgacagtgctgtggagctgtcagcacaaaca
cggcaggaagtggaagacttaatcaacgagaaggaggcccagttcaaggctaaacaagag
gagcagtcgcgccttctggatgaacttgcaggcaagctgcagagcctggatctctccgaa
gtggctgagaagacgtgtggcactcctgcaggagcctcttgtgccgagtccgagtgtggc
ggtttaaactgtcgaacagatgaaggaaagaagaagtgtggaggacctggctgcgacggg
ctggtgactgtagctcacaatgcttggcagaaagccatggattttgacagagacatcctc
agtgcgttagcagaagttgaacaactctccagaatggtttctgaggcgaaacagagagct
gacgaagcaaaacaaaatgcacaagcagttttgctcaaaaccaatgctacaaaagaacaa
gtggacagaagcaacgaagatctgagaaatcttattaaacagattagagacttcctcatg
caagacagcgctgacctggatagcattgaagcagtggctaatgaagtgctgaacatggag
atgccaagcactccccagcagctgcaagccctgacagaagacattcgtgagcgtgtagaa
agcctttctgatgttgaggtcattctgcagcagagcgctggagacattgccagagcagaa
atgctactagaggaagctaaaaaagcaagcaaaggtgcaacagatgtcaaagtcactgca
gacatggtgaaagcagcactggaagaagctgaaaaagctcaaaatgcagctgaaaaagcc
atcaaacaagctgatgaagatattaaaggaactcaagacctgctgacctcgattgaatct
gaaaatgcagcatctgaagaaacattgaacaacgctaccttacgtctgtttgagctggag
aagagcgttgaagaccttaagcaaaaggctgctacaaattcagagaatgtggacaatata
gaagaaaaaattgtttctgcaaaacaaaatgctgaagaagttaaaaaggttctcaatacc
gagctgaacgacaagtacaaaacagtggaagatctcattgccaagaagacagaagagtca
gctgacgccaggaggaaagctggcatgttgcaagatgaagctaaagccttgttggctcaa
gcaaacagcaaactccagctgctcaaagacttggaaaatacatatgaaagcaatcaaaaa
gttctggaagacaaagccaagcagttggtggaactggaagagacagttcgctccctctta
cagacaatcagccagaaggtcgctgtttatagcacttgcctgtag
DBGET
integrated database retrieval system
