Antrostomus carolinensis (chuck-will's-widow): 104531300
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Entry
104531300 CDS
T08541
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104531300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104531300
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104531300
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
104531300
NCBI-ProteinID:
XP_010174453
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MSQHALPSGEDDEDDSDSDSDDDDVKVTIGNIKTGAPSYMGTPMNLNLKTGRGYGATASA
KLQPKGIDLDAAGNINGLPVIEVDLDSFEDKPWRKPGADLSDYFNYGFNEETWKAYCEKQ
RRLQLGLDPAPPISTENKITVQQGRTGNAEKEVENNIIKTEFKTDFLALVGGRMKAGPPP
NRKLGGTIDVIGGQAGTIRRVEGRRRDKHASEENPIQVLGDHGSKPQPPQQPQQPSQPQQ
PPQQQPFAPPAGPPPPPLAGPPPPHFLHPPPPVTSVPPPLHPPGLPPPGPIPGLFPPPLA
PPPALLIPTLDGQPASYNNRQPPPFGYNSADSGFISYPPISTSHTPWVTTVDKGTSSSSS
SHWEYSGSRRERERERERERERERDRDRTPTTSEYNNDDERYRYYSRERSYDFERDYRRS
RDRSREREDRHRERRHRDKEESSKHKSSRRKQHESEEGESHRRHKHKKNKRSKEEKEASE
DGAQEGEEQDAKE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacatgcccttccaagtggtgaagatgatgaagatgacagtgatagcgacagt
gatgatgacgacgtgaaagttactattggcaacattaaaacaggagcaccatcatacatg
ggaactcctatgaatctaaacttaaaaacgggtagaggctatggagcaactgcttcagcc
aagttgcagcccaaaggtattgacttagatgctgcagggaatataaacggattgcctgtt
atagaagtggatttagattcatttgaagacaaaccctggaggaaaccaggtgctgatctt
tctgattactttaactatggattcaatgaagaaacatggaaagcatattgtgaaaagcag
cgacggcttcagcttggactggatcctgctcctcccatcagcactgaaaataagatcaca
gttcagcaaggaagaacaggaaatgctgaaaaagaagtggaaaacaacataatcaaaaca
gaattcaaaacagacttcttggctctggtgggaggacgcatgaaggctggacctcctcct
aataggaagctgggtgggacaattgatgtgatcggtggccaggcaggcacaattaggaga
gtagaaggaagacgtcgtgataagcatgcctctgaggagaacccaattcaggtccttgga
gaccatggaagtaagccacaacccccacagcagccccagcaaccatcccagccccaacag
ccacctcagcaacagccgtttgcaccaccagcaggcccaccgcctcccccgctcgctggg
ccacctccaccacacttcctccaccctcctccaccagtgacttctgttccacctcccctg
catcctccaggtctgccaccacccggtcctattccagggttgttcccgcctcctctggca
ccaccaccagctctcctcattccaaccttggatggccagccagccagctacaataacagg
cagccacctccatttggctacaactctgcagattcaggtttcatcagctacccacccatc
tccacgtcccacacgccctgggtgacaacggtggacaaaggcacaagcagttccagcagc
agccattgggagtactcgggatcccggcgcgagagggagcgggagcgtgagcgcgaaagg
gaaagggagagagacagagaccgcactccgaccactagcgaatacaacaatgatgatgaa
cgataccgctactacagccgagagcgcagctacgactttgagcgtgactaccgccggagt
cgagatcgcagcagggagcgagaggatcggcaccgagagcgcaggcacagggacaaagag
gagagcagcaagcataagtcttcaagacgcaagcaacatgagagcgaggagggggagagt
catcggcgtcacaagcacaaaaagaacaagaggagcaaagaggagaaggaggccagtgaa
gacggtgcccaggagggagaggagcaggatgccaaggagtga
DBGET
integrated database retrieval system
