Antrostomus carolinensis (chuck-will's-widow): 104532135
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Entry
104532135 CDS
T08541
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104532135 (HTT)
04131 Membrane trafficking [BR:
acar04131
]
104532135 (HTT)
03029 Mitochondrial biogenesis [BR:
acar03029
]
104532135 (HTT)
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104532135 (HTT)
Membrane trafficking [BR:
acar04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
104532135 (HTT)
Mitochondrial biogenesis [BR:
acar03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
104532135 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
Htt_C-HEAT
HEAT
HEAT_EZ
HEAT_EF3_N
Rad26-like_helical_rpts
Motif
Other DBs
NCBI-GeneID:
104532135
NCBI-ProteinID:
XP_010175558
LinkDB
All DBs
Position
Unknown
AA seq
2071 aa
AA seq
DB search
AAIPEEPLQRPKKELSTTKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSE
DAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGASRSLRAALWRFAELAHLV
RPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAIPKIMAAFGNFANDNEIKVLLKAFIG
NLKSSSPTIRRTAAGSAVSICQHSRRMQYFYAWLLNVLLGLLVPVEDDHPTLLILGVLLT
LRYLIPLLQQQVKDTSLKGSFGVTRKETEISPSPEQLIQVYELTLHYTQHQDHNVVTGAL
ELLQQLFRTPPPELLHALTASGGIAQVSVSKDESASRNRSGSIVELIAGGGSSCSPVLAR
KQKGKILLGEEEGLEDDPETRSDVSTASFAASMKSEINSELASSSGVSTAGSVGSSAADS
TGHDIITEQPRSQHTLQSDSVDLTSCDLTSTATEGEEDDVLSRSSSQISAVQSDPTMDLN
DGTQASSPISDSSQTTTEGPDSAVTPSDSSETVLEGAEGQYSGMQIGQLQDEEDEAANIL
QDDSSESFRNSSIALQQPHLLKTMSHSRQPSDSSVDRFTSKEDAADPGDHENKPSRVKGD
IGHYTDGDSAPLVHCVRLLSASFLLTGEKGALVPDREVRVSVKALAVSCVGAAVALHPES
FFSKLYKTPLEAMREEYEEQYVSDILNYTDHGDPQIRGATAILCGTIVNSILIKSRFDVE
KWLINVRNSTGNLFSLVDCVPLLQKTLKDESSVTCKLACTAVKHCIMSLCSSSYSELGLQ
LIVDLLTLKNSSYWLVRTELLETLAEVDFRLVSFLEGKTESLHRGFHHYTGLLKLQERVL
DNVVICLLGDEDPRVRHVAAASLIRLVPKLFYNCDQGQADPVVAVARDQSSVYLKLLMHE
TQPPSHFAVSTITRIYRGYNMLQSPTDVTMENNLSRVIAAVSHALTISTTRALTFGCCEA
LCLLSTTFPVCTWTIGWHCGVSQPSPSDEVQKGCTIGMAGMVLSLLSSAWFPLDLSAHQD
ALILTGNLLAASAPKCLKNPWSAEDDSNQGAAKQEEPWPALADRTLVTLVEQLFSHLLKV
INICAHVMDDVAPGPAVKAALPSLTNPPSLSPIRRKGKERESVEQASVPMSPKKGGETSP
ATRQTDATGPVPTSKSSSVGSFYHLPSYLKLYDVLKATHANYKVTLDLQNSNEKFGCFLR
SALDVLSQILELATLQDIGKCVEEILGYLKSCFNREPTMATVCVQQLLKTLFGTNLASQY
DGLSSNPNKAQGKAQRLGSSNLRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQEHDAS
GWFDVLQKVSTQLKTSITSAAKHRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQV
LDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYER
YHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQK
EVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQMHIDSH
DALGVLNTLFEILAPSSLRPVDMLLRSMFVTPKTMASVSTVQLWISGILAILRVLISQST
EDIVLSRIQELSFSPYLISCQAIDRLRCGENNVAAPEDHTEVKQAKYLPEETFSRFLLQL
VGILLEDIVTKQLKVDMNEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAATRLFTGDG
SDGSFYTLESLSELVQSMIPTHPSLVLLWCQILLLVNYTNYNWWSEVHQTPKRHSLSTTK
LLSPQISGDSDESTLESKRGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHVQDL
INLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLAAPTTLKKTLQCLEGIHLSQSGA
VLTLYVDKLLCTPFRVLARMVDTLACRRVEMLLAATLQNSITQLPVEELDRIQEYLQNSG
LATRHQRLYSLLDRFRLMVAPDTTSPSPLVTSHPLDGEDQPALENVVLDKDWYVSLVRSQ
CCIKSDSALLEGAELVNRIPQPDLNSFMTSK
NT seq
6213 nt
NT seq
+upstream
nt +downstream
nt
gctgccatccccgaggagccgctccagagaccaaagaaagaactttcaactaccaagaaa
gatcgagttaatcattgcctaacaatatgcgaaaacatagttgctcagtctttaagaaat
tctccagaatttcagaagctgctggggattgctatggaactctttctcctctgtagtgag
gatgcagaatctgatgtccggatggttgctgatgaatgccttaataaagttattaaagct
ttgatggattccaatcttcctaggttacaattagaactgtataaagagattaaaaagaat
ggtgcttccagaagtctacgtgctgcactctggagatttgctgagcttgcccatctagtt
cgacctcaaaaatgcaggccgtacttagtgaaccttttgccctgtctaacacgaataagc
aagagacctgaagaatcggtacaagagacactagctgcagcaataccaaaaatcatggca
gcgtttggcaattttgcaaacgacaatgaaattaaggttttattgaaggctttcataggt
aatcttaaatccagttcccctactatccgtcgaacagcggcaggatcagcagtaagcatc
tgtcaacattcgcgaaggatgcagtatttttatgcctggttattgaatgtacttttaggc
ttgttggttcctgtagaagatgatcatcctactcttttaattctgggtgttttacttaca
ctgaggtatctcatacctttattgcaacaacaagtaaaggataccagcctgaaaggcagt
tttggtgtaacaagaaaagaaacagagatttcaccttcaccagaacaacttatacaggtt
tatgaattgactctgcattatacccagcatcaggaccataatgttgtgactggagcttta
gaattattacaacagctgtttagaacaccaccacctgaacttctccatgccctgaccgct
tcaggtggcattgcacaggtcagtgtatccaaagatgagtctgccagcaggaaccgcagc
gggagcatagtggaacttatagctggaggggggtcttcatgcagccctgttcttgcgaga
aagcaaaaaggtaaaatacttcttggtgaagaagaaggtttggaagatgatcctgaaacc
cggtcagatgtcagcactgcatcatttgcagcttctatgaagagtgagataaacagtgaa
ctagcttcttcatcgggtgtatcgacagctggctcagtagggagttcagctgctgattct
actggacatgatataattactgagcagccacgttcacaacacacgttacagtcagactct
gtagacctgacaagctgtgatttgacaagtacagctactgaaggggaagaagatgatgtg
cttagtcgaagctccagccagatcagtgctgtccagtcagatcctactatggacttgaat
gatggtacacaggcttcctcaccaatcagtgatagctctcagactactacagaaggtcca
gactctgctgtaaccccttcggacagttctgaaactgttttggagggtgctgaaggacag
tattctggaatgcagattggacagctgcaggatgaggaagatgaggctgcaaatattctc
caagatgattcatcagagtctttcagaaattcttccattgctcttcaacagcctcacctg
ttgaaaaccatgagccatagcaggcagccttctgatagcagcgtagatagatttacatca
aaagaagatgcagccgatcctggtgatcatgaaaataagccctccagggtaaagggagac
ataggtcactataccgatggagattctgctcctttagtgcactgcgttagactcctgtca
gcctcttttctgctcactggggagaaaggagccttagttcctgatagagaagtgagagtt
agtgtaaaagccctggcagtaagttgtgttggagcagctgtcgcgcttcaccctgaatct
ttcttcagcaaattgtataaaacaccccttgaagcgatgcgggaagagtatgaggagcag
tatgtatcagatattctgaactacactgaccatggagatccccagattagaggagctact
gccattctgtgtggaacaattgtcaactccattctaattaaatcccgctttgatgtggaa
aaatggctaataaatgtcagaaactcaacaggtaatctcttttccttggtagactgcgta
cctctgctacagaaaacactgaaagatgagtcgtctgttacttgcaaactggcttgtaca
gctgtgaagcattgcatcatgagcctatgtagtagcagttacagtgaactaggtttacaa
ttaattgttgacctccttacgctgaagaatagctcatattggctagtaaggacggaactt
ctggaaacacttgcagaggttgattttcggctagtcagcttcctggaaggaaaaactgag
agcttgcaccgaggttttcatcattatactggtttactaaaacttcaggagagagtgctt
gataatgttgtaatatgtctgcttggagatgaagatccaagagttagacatgtagctgca
gcttcattaataaggcttgttccaaagctgttctataactgtgatcaaggacaggctgat
ccagttgtggcagtagcaagagaccaaagtagtgtctacctgaaactactaatgcatgaa
acacagcctccatctcactttgcagtgagcactatcaccagaatatatagaggttacaat
atgctgcaaagtccaacagatgtcactatggaaaacaatctctcaagggttattgcagca
gtttcccatgcattgacaatatccactacaagagcacttacatttggctgctgtgaagct
ttgtgccttctctccacaacgtttccagtctgtacctggactattggatggcactgtggt
gtttcccagccaagtccttcagatgaagttcagaaaggctgcaccattggaatggccggc
atggtactgtctctcctttcatcagcatggttcccactggacctctctgcacatcaggat
gctttgattttgactggaaacttgcttgctgcaagtgctcccaaatgcttaaagaatccc
tggagtgctgaagatgattcaaaccaaggtgctgcaaagcaggaggagccttggccagct
ctagcagatagaactcttgttactttagtagaacagctcttttctcatctgctgaaggtc
attaatatttgtgcacatgtaatggatgatgttgcccctggcccagcagtaaaggcagca
ttaccttctctcacaaatccaccttctttgagtccaattcggaggaagggaaaagagagg
gagtctgttgaacaggcatctgtgccaatgagccctaaaaaggggggtgaaacgagtccg
gctactaggcaaactgatgctactgggcctgttccaacaagtaaatcatcttcagtagga
agcttttatcatcttccttcatatctgaagttatacgatgtcttgaaagcaacccatgct
aattataaggttactttggatctccagaacagtaatgaaaagtttggatgttttttacgg
tctgccttagatgttctgtctcaaatcttggaacttgctactcttcaagacattggaaag
tgtgtagaagaaattttgggatacctaaaatcgtgtttcaacagagaaccaacaatggca
acagtttgtgtacagcagttactgaaaacattgtttgggacaaatctggcttctcaatat
gatggcttgtcttcaaaccccaacaaagctcaaggcaaagcgcaacgcttaggttcttcc
aatttgagacctggtctctatcattattgcttcatggcaccatacacacatttcacacag
gcccttgctgatgctagtctgaggaacatggttcaggctgagcaagaacacgatgcatcg
ggatggtttgatgtgctgcagaaagtttctacacagctgaaaactagcattaccagtgca
gcaaaacaccgtgctgataagaatgctattcacaatcacattcgtttatttgaacccctt
gtcataaaagcattgaaacaatatactacaacaacatcggtacagctgcagagacaagtt
ctagacttgcttgctcaacttgttcagctacgagttaactactgtcttctggattcagat
caggtgttcattggatttgtgctaaagcagtttgaatacattgaagtaggacagttcagg
gaatctgaagcaattattcctaatatcttttttttcctggtgttactgtcttatgagcgg
tatcattccaaacagataataggaattcctaagatcattcagctgtgtgatggtatcatg
gccagtgggaggaaagctgttactcatgcaataccagctctgcagcctattgttcatgat
ctctttgtattaagaggaacaaataaagccgatgctggaaaagagttggaaacacaaaaa
gaggtggtagtgtcaatgctgctgagacttattcagtaccatcaggtgctagaaatgttc
atcttagtattgcagcagtgtcataaagaaaatgaagacaaatggaaaagattgtcccgg
caaatagctgacatcattctcccaatgcttgcaaaacagcagatgcatatagactctcat
gatgctctgggagtactgaatactttgtttgaaattttggctccttcatcccttcgccct
gtggacatgcttttaaggagtatgtttgttactcctaaaacaatggcatcagtgagcacc
gtccagctgtggatttctggaattttagctatccttagagttctgatttcacagtcaaca
gaagacatcgttctgtcccgtatacaagagctttccttctcaccgtatttgatttcatgt
caagccattgacagactgagatgtggagaaaataatgtagctgcaccagaggatcatact
gaggttaaacaggctaaatatctgcctgaagagacattttctaggttcttattacaactt
gttggcattctactggaagatattgtaaccaaacaattgaaagtagacatgaatgagcag
cagcatactttctactgccaggagctgggcacgctgcttatgtgcttaatacatatcttc
aaatcagggatgtttagaagaatcactgctgcagccaccaggctttttacaggagatgga
tctgatggtagtttctatacccttgaaagtttgagtgaacttgttcagtccatgattccc
acacatccttctttagttctcctctggtgtcaaattctgcttcttgtcaactataccaac
tacaactggtggtcagaagtgcatcaaaccccaaagagacacagtctttctacgactaaa
ttgcttagccctcagatatctggagacagtgatgaatcgactttggaatctaaacgtggc
atgtgcaatcgagagatagtgagaagaggagcactcattcttttttgtgactatgtttgt
caaaacctacatgattcagaacacttgacctggcttattgtgaatcatgttcaagacttg
attaatctgtcccatgagcctccagtacaagactttattagtgctgttcacaggaattca
gcagctagtggtctcttcatccaggccattcagtcacgatgtgagaatcttgcagctccc
acaactctgaagaagactttacagtgcttagagggaatacatctcagccagtctggggct
gtcttaacattatatgttgataagcttctgtgtactccattccgtgtgcttgctcgcatg
gttgacacgctggcttgccgtcgggtagaaatgcttttggctgcaactttacagaacagc
attactcagttacctgttgaagaactggatagaattcaggaataccttcaaaacagtgga
ttagcaacaaggcaccaaagactttactcgctcttggataggtttcgtcttatggtagca
ccagacacaactagtccttcccctctggttacctcacacccacttgatggagaagaccaa
ccagctttagagaacgtagttctggacaaagactggtatgtgtcactagtgaggtcgcag
tgttgcatcaagtctgactcagctcttctagaaggtgcagagctggtaaataggattcct
cagcctgacctgaactccttcatgaccagcaag
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integrated database retrieval system
