Antrostomus carolinensis (chuck-will's-widow): 104532139
Help
Entry
104532139 CDS
T08541
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104532139 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acar03400
]
104532139 (LIG3)
Enzymes [BR:
acar01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104532139 (LIG3)
DNA repair and recombination proteins [BR:
acar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
104532139 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
aRib
mRNA_cap_enzyme
CDC45
Motif
Other DBs
NCBI-GeneID:
104532139
NCBI-ProteinID:
XP_010175564
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MAEQRYCVDYAKRGTAGCKKCKEKIVKGMVRIGKIVPNPFTESGGDMKEWYHVKCIFEKL
DKARATTKKIEDITDLEGWEELQDEEKELINKHISEANTKAASTPKKKVIVQAKLTATGQ
ITTKDPLSLIAPSPKKFSGFTAKPKNSEDVSANSSHKSGLSAKKCDPKHKDCLLREFRKL
CAMVAEKPSYNVKTQIIQDFLKKGSGGDGFHGDVYLTIKLLLPGVIKIVYNLNDKQIVKL
FSRIFNCSQEEMVRDLEQGDVSETIRLFFEQSKSCPPAAKSLLTIQEVDEFLIQLSKLTK
EDDQQSVLQHITRRCTGNDLKCIIRLIKHDLKMNAGAKHVLDALDPNAYEAFKASRNLHD
VVERVLKNQQEAEKVPGLKRTLSVQASLMTPVQPMLAEACKSIEYAMKKCPNGMYAEIKY
DGERVQVHKNGDHFSYFSRSLKPVLPHKVAHFKDFIPQAFPGGQSMILDSEVLLIDNKTG
KPLPFGTLGVHKKAAFQDANVCLFVFDCIYFNDISLMDRPLCERRKFLHDNMVEIPNRIL
FSEMKHVTKASDLADMITRVIREGLEGLVLKDVKGNYEPGKRHWLKVKKDYLNEGAMADT
ADLVVLGAFYGQGSKGGMMSIFLMGCYDPKSEKWCTVTKCSGGHDDATLARLQTELDMVK
ISKDPSKIPKWLKINKIYYPDFIVPDPKKAPVWEITGAEFSKAEAHTADGISIRFPRCTR
IRDDKDWKTATNLQQLKELYQLSKEKADFSVVAGEEDESTAGSSGENEGNSRSSTPHSAI
KTPPSKSPAKARKPEESKAATGSPQKSEERRGEKRKASEMDDNEKKTLLDIFTGVKLYLS
PSVKDFDKIRRYFIAYDGDLVEEFDTASATHVIGDTDENPGAKRVSPNWIWECIRKRRLV
APC
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagaggtactgcgtagactacgccaagcgtggcacagcaggctgcaagaaa
tgcaaagaaaagatcgtgaagggaatggtgcgcattggaaagattgttcccaatcctttc
accgagtctggtggggacatgaaggagtggtaccatgtgaagtgcatatttgagaagcta
gataaggcccgggccaccactaagaaaattgaagacatcacagacttggaagggtgggaa
gagctacaagatgaggagaaagaattaatcaacaagcacatctcagaagctaacaccaag
gccgcaagtacaccgaagaaaaaagtcatagtccaagctaagctcactgccacaggacaa
ataactacaaaagatccattgtctctcatcgctccatcaccaaaaaagttctctggcttc
acagccaagccaaagaattcagaagatgtctctgcaaactcttcccacaaatctggcctg
tctgcaaagaaatgtgatccgaagcacaaagactgcttgctgcgggagttcaggaagctc
tgtgccatggtggctgaaaagccgagctacaacgtgaaaacacagatcatccaggatttt
ctgaagaagggatctggaggagatggttttcatggtgatgtatacctgactattaagctg
ctgttaccaggcgtcattaaaattgtttacaacttgaacgataagcagattgtaaagctg
ttcagtaggatttttaactgcagccaagaagaaatggtccgggacctggaacagggagat
gtttccgagaccatacgcctcttctttgaacagagcaagtcttgtcctccagcagccaaa
agtctcctgaccatccaagaggtggatgaattcctcatccagctctcaaagcttactaag
gaagatgaccagcaaagtgtgctgcaacatatcactcgcagatgtacgggtaacgacctg
aaatgcatcatcaggctcattaagcatgacttgaaaatgaatgctggagcaaagcatgtg
ttggatgctttggatcccaatgcttacgaggcgttcaaagcatcacgcaacctccatgac
gtggtcgagcgagtcctgaagaaccagcaggaggctgagaaggtgccaggtctgaagcga
accctcagtgtgcaggcctctctgatgaccccggtccagcccatgctggctgaagcctgc
aagtcaattgagtatgccatgaagaagtgcccaaatggcatgtatgcagagatcaaatac
gatggcgagcgggtgcaggtccataaaaacggagatcacttcagctacttcagcagaagc
ctcaaacctgttctcccacataaagtagcccattttaaggacttcatcccccaggctttc
cctggtgggcaaagtatgatcctggattcagaagttcttctgattgacaacaaaactggc
aagccacttccttttgggactcttggtgtgcacaagaaagctgctttccaagatgccaat
gtctgcttgtttgtgtttgactgcatctatttcaacgacatcagcctgatggacaggcct
ctgtgtgaacgtcgtaagtttctccacgataacatggttgaaatccccaaccggatcctc
ttctcggagatgaagcacgtcacaaaagcttcagatctggcagatatgatcacccgagtc
atccgtgagggactggaaggactggtgttgaaagatgtaaagggtaattatgaaccagga
aaacgacactggctgaaagtgaaaaaggactacctaaatgagggtgccatggctgacaca
gcagacctggtggtgctgggagctttctatggacaaggcagtaaaggtgggatgatgtcc
atcttcctcatgggctgctatgatcccaagagtgagaagtggtgcactgtgaccaagtgt
tccggtggccacgatgatgccaccttggcacggctgcaaacagagctggatatggtgaag
atcagcaaggatcctagtaaaattccaaagtggctaaaaattaacaagatctactaccca
gacttcattgtcccagatccaaagaaagccccagtgtgggagatcacaggggctgaattc
tcgaaagctgaagcccacactgcagacgggatctccattcgcttccctcgctgcacccgc
attcgagatgacaaagactggaagacagccaccaacctccagcagcttaaggagctgtac
caactctccaaagagaaggctgatttcagtgttgttgctggggaggaagatgagtccaca
gctggcagcagtggagagaatgagggaaattccaggtcttccacaccacacagcgctatt
aaaactcccccaagcaagtcacctgcaaaagcccggaagccagaagagagcaaagcagct
actggatcccctcaaaaatcagaggagagacgaggggagaagagaaaagcatctgagatg
gatgacaatgaaaaaaagacactgctggacatattcactggtgtgaagttgtacctgtcg
ccctctgtgaaggactttgacaaaatccggcggtactttatagcgtacgatggggatctt
gtggaggagtttgacacagcctcagcaacgcacgttataggggacactgatgagaatcct
ggtgctaagcgcgtgtctcccaactggatctgggaatgcatccggaaacggagactggta
gccccatgctag
DBGET
integrated database retrieval system
