Antrostomus carolinensis (chuck-will's-widow): 104532694
Help
Entry
104532694 CDS
T08541
Name
(RefSeq) embryonic polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03015
mRNA surveillance pathway
acar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104532694
09123 Folding, sorting and degradation
03018 RNA degradation
104532694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acar03019
]
104532694
03041 Spliceosome [BR:
acar03041
]
104532694
Messenger RNA biogenesis [BR:
acar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104532694
mRNA cycle factors
Stress granule specific factors
104532694
Spliceosome [BR:
acar03041
]
Complex C
Other components
Complex C specific factors
104532694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RBD_DEAH11
RRM_RdRP1_2
RRM_3
ATP-grasp_2
DUF6262
Motif
Other DBs
NCBI-GeneID:
104532694
NCBI-ProteinID:
XP_028943300
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQ
QPVDAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNLDDSIDNKALYDTFS
AFGNILSCKVVCDENGSRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGHFKSRKERE
AEFGARAMEFTNVYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDNTGRSKGFGFVNFEK
HEEAQKAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQIKQERVSRYQGVNLYVKN
LDDGIDDERLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVST
KPLYVALAQRKEERKAILTNQYMQRLATMRALPGPLLGSFQPPPGYFLPPIPQPQSRATF
YSPSAVVPVRPATRWSAQPSRPPPYPAATPVLRAAAPPRRLLSNISTMRQASTQVPRVPP
QAQRVANIGTQTVSARVPSSPTLPRGAPQYKYSSAVRNVQPMGHVPPVVAPQVGEPAVHV
HGQEPLTASMLAAAPPQEQKQMIGERLYPLIHTMHPSLAGKITGMLLEIDNSELLLLLES
PDSLHSK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctagtggccctggctatccgttagcctctctctatgtgggggacctccacccg
gacgtgactgaagccatgctctatgagaagttctcacctgctgggcccatcatgtccatc
cgagtctgtcgggatgttgccacacgccgatcactgggctatgcctacataaacttccag
cagcccgtggatgctgagcgagccctggacaccatgaacttcgaagtgatcaaaggccgc
cccatccgcattatgtggtcccagcgggaccctgggctcaggaagtctggggttggaaac
atcttcatcaagaacctggatgactccattgataacaaagccctgtacgacacgttctcc
gccttcggaaacatcctgtcctgcaaggtggtttgtgatgaaaatggatcccgtggctat
ggctttgttcactttgagactcacgaggcagcgactcgggccatcgagaccatgaatggg
atgttgctcaatgaccggaaggtgtttgttggccatttcaaatcccgcaaagagcgtgag
gccgagtttggggctcgggcgatggagttcaccaacgtctacatcaaaaactttggggat
gacatggatgatgacaggctgcgggaaatattctccaagtttggaaagacgctaagtgtc
aaagtcatgatggacaacactggccgctcgaagggctttggatttgtcaactttgagaag
cacgaagaagcccaaaaggcggtggctgacatgaacgggaaggagatcaacgggcggatg
gtgtacgtgggccgagcccagaagcggctggagcgccagagtgagctcaagcggaaattt
gagcagatcaagcaggagcgagtgagcaggtaccagggggtcaacctgtacgtgaagaac
ctggacgatgggatagatgatgagaggctgaggaaggagttctctccctacggcaccatc
accagtgccaaggtgatgacagagggtggccacagcaaagggtttgggtttgtatgtttt
tcctccccagaagaggctaccaaggccgtgacagaaatgaacgggcggatcgtcagcact
aagcctctctacgtcgcgctcgctcaaaggaaagaggagcggaaagcaatcctcaccaac
cagtacatgcagaggttggccaccatgagggctctgcccggccccctcctgggctccttc
cagccccccccggggtacttcctaccccccatccctcagccacaaagcagagctaccttc
tacagccccagcgcagttgtcccagtccgtcctgccactcgctggagtgcgcagccctcc
cggcctcccccgtatcctgcagccacccccgtcctgagggctgctgcaccgccccggcgc
ctgctgtccaacatcagcaccatgagacaggcctccacccaagtgccccgcgtgccccct
caggcccagagagtggccaacattgggacgcagacggtcagcgctcgggtgccctcctcg
cccaccctgccacgaggtgccccccagtacaagtactcctcggccgtcaggaacgtccag
ccgatggggcacgtgccgcccgtggtggccccgcaggtgggagaacctgctgtgcatgtc
catgggcaggagccactgacagcatccatgctagcagcagcccctcctcaggagcagaag
caaatgataggtgagcgcctctaccctctgatccacacgatgcatccctcactggccggc
aagatcactgggatgctgctggagatagacaactcggagctgctgctgctcctggagtcc
cctgactccctgcactccaag
DBGET
integrated database retrieval system
