Antrostomus carolinensis (chuck-will's-widow): 104532990
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Entry
104532990 CDS
T08541
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain
KO
K06238
collagen type VI alpha
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar04510
Focal adhesion
acar04512
ECM-receptor interaction
acar04518
Integrin signaling
acar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104532990 (COL6A3)
04518 Integrin signaling
104532990 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104532990 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104532990 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acar04147
]
104532990 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
acar00536
]
104532990 (COL6A3)
Exosome [BR:
acar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104532990 (COL6A3)
Glycosaminoglycan binding proteins [BR:
acar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104532990 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
104532990 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
Kunitz_BPTI
fn3
Motif
Other DBs
NCBI-GeneID:
104532990
NCBI-ProteinID:
XP_010176644
LinkDB
All DBs
Position
Unknown
AA seq
3139 aa
AA seq
DB search
MRKHRHLPFVAMFCLLLSGFCSVHAQQQAAVKTIAVADIIFLVDSSWSIGKEHFQLIREF
LYDVVKALDVGGNDFRFALVQFSGNPHTEFQLNTYPSTRDVLSHIANMPYVGGGIKTGKG
LEYLIENHLTEAAGSRASEGVPQVIIVLTDGRSQDDVALPSSVLKSARVNMFAVGVQDAV
EGELKEIASEPFDTHLFNLENFTALHDIVGDLVTSVRSSMTPEKAGAKGLVKDITAQESA
DLIFLIDGSNNIGSVNFQAIRDFLVNLIESLRVGAQQIHIGVVQYSDQPRTEFALNSYST
KADVLDAVKALSFRGGEEANTGAALEFVVENLFTQAGGSRIEEAVPQILVLISGGESSDD
IREGLLVVKQASIFSFSIGVLNADSAELQQIATDGSFAFTALDIRNLDALRDLLLPNIVG
VAQRLILLEAPTIVTEVIEVNKKDIVFLIDGSTALGTAPFNAIRDFVGKIVQRLEVGPDL
IQVAVAQYADTVKPEFYFNTHQSRKDVAANVRRMKLMGGTALNTGSALDFVRNNFFTSAA
GCRMEEGVLPMLVLITGGKSMDAVDQAAAEMKRNRIVILAIGSRNADLAELQEIAHERDF
VFNPNDFRLQFMQALLPEVLSPIRTLSGGILIQEPPSVQVTKRDIIFLLDGSLNVGNANF
PFVRDFVATLVNYLDVGSDKIRVGLVQFSDTPKTEFFLYSYPTKSDIIQRMGQLRPKGGS
VLNTGSALNFVLSNHFTEAGGSRINEQVPQVLVLVTAGRSADPFLQVSNELARAGVLTFA
VGVRNADQAELEQIAFNPRMVYFMDDFSALAALPQELNKPITTYVSGGVEEVPLAPTESK
KDILFLIDGSANLLGSFPAVRDFVHKVISDLNVGPDATRVAVAQFSDTIQIEFDFAELPS
KQDMLLKVKRMKIKTGKQLNIGVALDEAIRRLFVKEAGSRIEEGVPQFLVLLAAGRSTDD
VEQPSDALKQAGVVTFAIKAKNADPVELERIVYAPQFILNVDSLPRISELQPNIVNLLKT
IQLQPTVVERSEKKDVVFLIDGSDGVRRGFPLLKTFVQRVVESLDIGPDKVRVAVAQYSN
VIQPEFLLDTHEDKAELISAIQELKVMGGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQ
FLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFLPDFAISVPDFSQL
DTVQQVVSNRVIRLTKKEIESLAPDLIFTSPSPAGVKRDVVFMVDGSRYAAQEFYLIRDL
IERIVNNLDVGFDTTRISVVQFSEHPHVEFLLNAHSTKDEVQSAVRRLRPQGGQQVNVGE
ALEFVAKTIFTRPSGSRIEEGVPQFLIILSSRKSDDELEYPSLQVKQVGVAPMVVAKNVD
PEELVQISLSPDYVFQVSSFQELPSLEQKLLTPIETLTVDQIRRLLGDVQTIPDISGDEK
DVVFLIDSSDSVRPDGLAHIRDFISRIVQQLEVGPNKVRIGVVQFSNNVFPEFYLKTHKS
KNAVLQAIRRLRFRGGSPVNAGKALDHVVKNYFIKSAGSRIEDGVPQHLVVILGDRSQDD
VNRPANVITSTSIKPLGVGARNVDRSQLQVITNDPERVLVVQDFTGLPTLEKKVQSILDE
LPIPTTETPGVLGPGAKKQADIVFLLDGSINLGRDNFQEVLQFVYSVVDAIYRDGDSIQV
GLAQYNSDVTDEFFLKDYSTKPQILDAINKVIYKGGRVANTGAAIRHIQAKHFVKEAGSR
IDQRVPQIAFIITGGKSSDDGPSASSEIAQKGVKVFAVGVKNIDLKEVTRLASESATSFR
ASTAQELSELNEQVLVTLEAAMEEKLCLGTTDVTRDCDLDVILGFDVTNVDPGQNIFNFQ
RGLESRVESVLNRITQMQKISCTGNQTPNVRVSIMAQARGGPVEGLDFSEYQPELFERFQ
GMRTRGPYFLTADTLRSYLNKFSSVPSGSTKVVIHFTDGADDSIDQLETASSALRAEGAN
ALIFVGLDRVSNFDKLMQLEFGRGFTYNRPLGVNLQDLDFELAEQLDNIAERTCCKVPCK
CAGQRGDRGVSGPIGPKGATGDLGYGGYPGDEGGPGERGPPGMNGTQGFQGCPGHRGTKG
SRGFPGEKGELGEMGLDGIDGEEGDKGLPGSSGEKGYSGRRGDKGVKGERGERGDRGLRG
DPGDSGADNTQRGSRGQKGEIGPMGETGPVGLGGQDGAVGRKGMTGRRGPIGVKGTKGSL
GQAGPAGEQGMRGPQGPPGQLGTPGIRGEQGVPGPRAGGGPPGVPGERGRIGPLGRKGEP
GNPGPKGPNGQQGPRGEMGDDGRDGIGGPGPKGRKGERGFIGYPGPKGGPGDRGGAGGLG
PKGNRGRRGNAGEPGTPGQKGEVGYPGPSGLKGDKGESRDQCALVRNIKDKCPCCYGPKE
CPVFPTELAFAIDTSSGVVREVFNRMKQTVLRVVNNLTIAESNCPRGARVALVTYNNEVT
TEIRFADARKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRARSGFLMRKVAVFF
SNGDTRASPQLNDAVLKLYDAGVMPVFLTSRQDPVLTRALEINNTAVGHAIVLPASGSQL
NETIRRLLTCHICLDVCDPDPICGFGSQRPVFRDRRAAPTDVDTDIAFIMDSSESTTPLQ
FSEMKKYISHLVSNLEISSEPKVSQHHARVAVLQQAPYEYETNSSFPPVKTEFSLTDYGS
KEKIINYLHNQMTQLHGTRAIGSAIEHTMAHVFESAPNPRDLKVIVLMMTGKVNKKELEY
LQKVVIGAKCKGYFFVVLGIGRKVNAKNIYSLASEPNDVFFKLVDKPGELHEEPLLRFGR
LLPSFIRSDSAFHLTPEMRKQCEWFQNNQQTKGQSPVHTGQKAVYVAPNVTISRTISAST
TVSPSVKPVVSTNTHVRTTTASTTVQTRATDQTTASTTVQMNATVQSASNTAAHPKATGR
STAGSTATVAGGRRRQGAKTHDIQITDITENSARLRWASPEPHNAYVSDITITLAHDHTL
VQKQNLTGTEHIIRGLRSGQKYLVVITGYQKAQPKVTYTGTFSTKTPAQTKVSLANMMLN
TEPLEGPESVTDICGLQKEEGTCRNFVLKWYYDPDTKSCARFWYGGCGGNENRFNTQKEC
ETVCVPGNINPGVVTTIET
NT seq
9420 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcgacatttgccctttgtggcaatgttttgcctcctactctcaggtttt
tgctcggtgcatgcccagcagcaagcagctgtcaaaaccattgccgtggctgatataata
tttctagtggattcctcttggagcattgggaaggaacatttccaactcattcgagagttt
ctgtatgatgttgtaaaagctttagatgtgggaggaaatgattttcgctttgccttggtc
cagttcagcggaaacccccacacagagttccagttaaatacctacccctctacccgagac
gtcctatcccatattgccaacatgccttacgtggggggaggcatcaagactggaaaagga
ttagagtacctaatcgagaaccatctcactgaagctgctggaagcagagccagtgaaggc
gtccctcaggttattatagtgttaacggatggacgatcccaagatgatgtggctctgcca
tcatctgtccttaaatcagcccgtgtaaacatgtttgcggtcggcgtgcaggatgcggtg
gaaggggagctaaaggaaatagcgagcgaacccttcgatacgcaccttttcaacctagag
aattttactgctctccacgacatagttggagacttagtgacaagtgtccgttcatccatg
actccagaaaaggctggggccaaaggactggttaaagacatcacagctcaagagtccgct
gaccttattttccttattgatggatcaaacaacatcggaagtgtcaattttcaagccata
cgtgatttccttgtaaatttgattgaaagcctcagagttggagctcagcaaatacacatt
ggggtggtgcagtatagtgatcaacccagaaccgagttcgctttgaacagctactccaca
aaagcggatgttttggatgccgtgaaggcacttagtttccgcggtggcgaggaagcgaac
accggtgcggcactggagtttgtggtggagaacctcttcacccaggcaggaggcagcagg
atagaggaagcggtgcctcagattttagtgctgataagtggtggagagtctagtgatgat
atccgagagggcttgttagtggtgaagcaagctagtatattttcatttagcattggggtc
ctgaatgctgacagtgcagagctgcagcagattgctactgatggaagcttcgcatttact
gccctggatatccgtaaccttgatgctcttcgagacttattactgcccaacattgttgga
gtggcccaaagactcattttgttagaggccccaaccattgtgactgaagttattgaagtg
aacaagaaggatatagtcttcctgatagatggctcaactgctctggggactgcccccttt
aatgcaattcgtgatttcgttggcaaaattgtccaaaggctggaggttggacccgacctg
atccaagtcgcagtggcgcagtatgcagacactgtgaagccagagttttattttaacacc
catcagagcagaaaggatgtggcggctaatgtgaggagaatgaagctcatgggtggtaca
gcactcaacactggctcggcactggattttgtgaggaacaacttcttcaccagtgctgct
gggtgcaggatggaggaaggggtgctccccatgctggtgctcatcactggtggtaagtcc
atggatgctgttgaccaagccgcagcagagatgaaaaggaaccggatagtgatccttgcc
attgggtcgagaaacgccgacctggcagagcttcaagaaattgcccatgagagggatttt
gtgttcaacccaaatgatttccgccttcagttcatgcaagcccttcttcctgaagtgctc
tcgcctatccggaccctctctggaggaattcttatccaagaaccaccatcagttcaagta
accaaaagggatatcatctttcttttggatggatcactcaacgtcggaaatgccaacttc
ccctttgtgcgtgactttgttgccaccctagttaactaccttgatgtcggcagtgacaaa
atccgagttggcttagtgcaatttagcgacactcctaaaactgagttctttctatattcc
tacccaaccaaatcagacataattcaacgtatggggcagctgaggcccaagggggggtca
gtgctgaacactggctctgcactgaactttgtgctttcgaatcacttcacggaagctggt
gggagcagaataaatgaacaagtgccgcaggtcctagtcctggtgacggcagggagatct
gccgatcccttcttgcaagtttccaatgaattagctcgggccggagtgctgacttttgct
gttggagttaggaatgcggatcaggcagaacttgaacagattgcctttaatccaagaatg
gtttattttatggatgatttcagtgctctggcagctttaccccaggagttaaataaacct
ataacaacatatgttagtggaggtgtggaagaggttccactcgccccaacagaaagcaag
aaagatattttattcctgattgatggctcagccaacctcttgggtagctttcctgccgtc
cgggactttgtacataaagtcatttctgacctgaacgtgggtcctgatgccacacgagta
gctgtggctcaattcagtgacaccatccaaattgaatttgactttgctgaactcccatct
aagcaagacatgcttctcaaagtgaaaaggatgaagataaaaaccgggaagcaactgaac
attggagtagcgctagatgaagctataaggaggctgtttgtgaaggaagctggaagcagg
atcgaagaaggggttcctcagtttttggtcctccttgctgctggaagatcgactgatgat
gtggagcaaccatcagatgctctgaagcaagctggagtagtgacctttgctatcaaagcc
aaaaatgctgaccctgtagagctggaaaggatcgtttacgccccacaattcattctgaac
gttgattccctccctcggatttcagagcttcagccaaacatagtcaacctattgaaaact
atccagcttcagccaacagtagttgaaagaagtgagaagaaggacgtggtgtttctaatt
gatggctctgatggtgtcagaagaggtttccctctactgaagacctttgtccaaagagtt
gttgaaagcctggatatcggtcctgacaaggtccgtgtagctgtggcacagtacagcaac
gtcatacaacccgagttcttactcgacacccatgaagacaaagcagagctcatcagtgcc
atccaggagctgaaggttatgggaggatctcctctgaacactggagcagcccttgactat
ctcatcaagaatgtcttcacagtgtcgagtggcagcaggatagcagagggcgtcccacag
ttcctcattctgctgactgctgaccggtcccaggatgatgtgaggaggccctcggtggtc
ctgaagacaagtggcacggtgcccttcggcattgggattggaaatgctgaccttacagag
ctgcagacgatttccttcctcccggattttgctatctctgtgcctgacttcagccagctg
gatacagtgcagcaggtcgtttccaacagagtcatccggctgaccaagaaagagatagag
tcacttgcccctgatctgatttttacatcacccagcccagcgggtgtgaagagggacgtt
gtgttcatggttgatggctcccgctatgccgcccaggaattctacctcatccgtgatctc
attgagaggatagtgaacaacctggatgtgggctttgacaccaccaggatttcagtggtc
caattcagtgagcatccccacgtggagttcctgctcaatgcccactccaccaaggatgag
gtgcagagtgctgtgagacggctgcggccacagggtggccagcaggtgaacgtgggggag
gcccttgagtttgtggcaaagaccatcttcacccggccttctgggagccgcatagaggag
ggcgtccctcagtttttgatcatcctctcctcccgcaagtccgacgatgaattagagtac
ccatcgctccaagtcaaacaagtaggggtggcacctatggtggtagcgaagaacgtggat
cctgaggagttggtacagatttcccttagtcctgattatgtattccaagtctctagcttc
caggaactgcccagcctcgagcagaagctgctgactcctattgaaaccctgactgttgac
caaattagacggctgctgggagatgtgcaaaccatcccagatatttctggtgatgaaaag
gacgtcgtcttcctcattgacagctctgacagtgttagacctgatggacttgctcacatt
cgggatttcatcagcagaatagttcagcagctggaagttgggccaaacaaagtgagaatt
ggtgtggtgcagttcagcaacaacgtcttccctgagttctacctgaagacccacaagtcc
aaaaatgctgtcctgcaagccatccgtcgcttgaggtttcgaggggggtcccctgtgaat
gctggcaaagccctagaccacgtggtgaagaactacttcattaagtctgcagggagcagg
atagaagatggagtgccccagcacctagttgtcatcctcggagatcgatcccaagatgat
gtgaacaggcctgctaacgtgatcacttcaaccagcattaaacctctgggtgtcggagcc
aggaacgtggacaggagccagctgcaggtcattaccaatgatcctgagcgcgtgcttgtg
gtacaggacttcacgggactcccaactttagaaaagaaagtgcagagtattcttgatgag
cttccaatacctacaacagaaacccctggagttttaggacctggagctaaaaaacaggct
gacattgtgtttttgctggatggctccatcaatctggggagggataacttccaagaagtt
ctccagtttgtctactccgtggtggatgccatttatagggatggcgactctatccaagta
ggactggcccaatacaactcagatgtcacagatgagtttttcctcaaggactactccacc
aaacctcagattttagatgccatcaacaaagtaatctacaaaggtggccgagtggcaaac
accggtgcggccatcaggcacatccaggcaaaacactttgtgaaggaagctggcagtcga
atcgaccagagggtgccccagatagccttcatcatcacaggtgggaagtcctcggacgat
gggccaagtgcctcttcggaaatcgcgcagaaaggcgtcaaggtgttcgcagtcggcgtg
aagaacatcgacctgaaggaagttacaaggctggccagtgaaagtgccacaagtttcaga
gcatccacagcccaggagctatctgagctgaatgagcaggtcctggttacgctggaagct
gctatggaggagaaattgtgcctaggaacgacagacgttacaagagattgtgacttagat
gtgatacttggctttgatgttacgaatgtcgaccccggtcaaaatatatttaatttccag
agaggtctggagtccagagttgagtctgtgttgaacagaataacgcagatgcaaaagatc
agctgcactggcaaccagacacccaacgtcagggtatccatcatggcccaggctcgggga
ggacctgtggagggactggacttctccgagtaccaacctgagctctttgagaggtttcaa
ggcatgcgcacccgcgggccctattttctcacagcagatacgctgaggtcctacctgaac
aaattcagttccgtgccctctggtagcaccaaggtcgtcatccattttactgatggtgca
gatgactcgatagatcagctggagactgcttcatctgctttgcgtgcagaaggtgccaac
gctctcatctttgtcgggctggaccgtgtgagcaattttgacaaattgatgcagctggag
tttggtcgtgggttcacctacaacagaccgctcggagttaatctgcaggacttggatttc
gagctggcagagcagctcgacaacatcgcagagaggacgtgctgcaaagtgccatgcaag
tgtgcagggcagagaggggacagaggtgtgtcgggtcccataggaccaaagggtgccaca
ggtgatcttggctatggaggctatcccggtgatgaaggaggaccgggtgagcgtggacca
ccgggtatgaacgggacacagggtttccagggatgtcctgggcacagaggaaccaagggt
tctcggggattcccaggagagaagggtgaactgggagaaatgggattggatggcattgat
ggagaagagggagacaagggtttgccaggttcctcaggagagaagggatactctggcagg
aggggtgataagggagttaaaggtgaacgaggagaacgaggtgaccgtgggctccgtgga
gacccgggagattcaggagctgataatactcaacggggatccagaggccaaaagggtgaa
attggaccaatgggagagacgggaccagtgggactgggtggccaagatggtgctgttggg
aggaagggtatgacaggacgaaggggacccataggagttaagggtaccaagggctcactc
ggtcaagcagggccggcaggagaacaaggcatgagaggtccacagggtcctcctggccag
cttggtacaccaggcataagaggagagcagggtgttcctggacctagggctggtggtgga
ccaccaggagtcccaggagagcggggaaggattggtcccctgggacgaaagggtgagcct
ggaaaccctggacccaaagggccaaatggacagcagggcccacgaggagagatgggtgat
gatggacgagatggaattggtggcccaggtcctaaaggtagaaagggagaacgtggcttc
ataggctaccctgggccaaagggtggacctggcgaccgtggtggtgctggaggccttggc
cctaaaggaaacagaggtcgcagaggaaatgcaggagaacctgggacacctggacagaaa
ggagaggttggataccctggaccatctggacttaaaggcgataaaggagaatccagagat
caatgtgcgcttgtgcggaacatcaaagacaaatgcccttgctgctacggtcccaaggag
tgccctgtcttcccaactgagctggcctttgctattgacacctcctcaggtgttgtgagg
gaagttttcaacaggatgaagcaaactgtgctcagagtggtcaacaacttaaccatcgct
gagagcaactgtcctaggggtgctcgggtggccctggtcacctacaacaatgaggtcacc
acagagatccgctttgctgatgccaggaagaaatcgagcctcctccagcagatccaaaac
ttccaggcgaccttgacaacaaaaccacgcagcctggagactgccatgtccttcgtggcc
aggaataccttcaagcgtgcccgaagtggcttccttatgaggaaagtggctgtcttcttc
agcaatggggacacaagagcttccccacagctcaacgacgccgtgctgaaactctacgat
gctggagtcatgccagtgttccttaccagcaggcaggacccagttctcaccagagctctg
gagatcaacaacacagcggttggacacgcaattgttcttccagccagcggcagtcagctg
aatgaaactatccggaggctcttgacttgtcacatttgtctggatgtgtgtgaccctgat
cccatctgcggttttggtagtcagagacctgtattcagagacagaagggcagccccaaca
gatgtagacactgacatcgccttcattatggatagctcggagtccaccacccctctgcag
ttcagtgagatgaagaagtacatttcccaccttgtaagtaacctggaaatcagctctgag
ccaaaagtatctcagcaccatgcaagagtggcagttctccagcaagctccttatgaatat
gaaaccaactcaagcttcccaccagtaaaaactgagttttccctaactgattatggatcc
aaagagaagatcatcaattaccttcacaaccaaatgacccagctccatggcacaagggct
ataggaagtgcaattgaacacacaatggctcatgtttttgaaagtgcaccaaaccctcgg
gatctaaaagtcatagttctgatgatgactggaaaagtgaataaaaaagaacttgagtac
ctgcagaaggttgttattggtgcaaaatgcaaagggtacttctttgttgtcttgggcatt
ggcaggaaggtgaatgcgaagaatatctatagcctagccagtgagccaaacgatgtgttc
ttcaaattggtggataaaccaggagagcttcatgaagagcctttactacgctttgggaga
ctgctgccatcttttatcagaagtgactctgctttccacttgactccagagatgaggaaa
cagtgtgagtggttccagaacaatcagcaaaccaagggccagagccctgtacacaccggg
caaaaagcagtgtacgtggcacccaacgtgaccataagccggaccatcagtgccagcacc
acagtcagtccgagcgtcaagcctgttgtgagcaccaacacccatgtcagaaccaccact
gccagcaccacggtccagaccagagccactgaccagaccacagccagcaccacagtccag
atgaacgccactgtacagagcgcatcaaacaccgccgcccaccccaaagccaccggccgc
agcaccgcaggcagcacggccaccgtggcaggtggcaggagaagacaaggtgcaaagacc
cacgacatccagatcactgatatcaccgagaacagtgccaggctacgctgggccagcccc
gagccacacaacgcttacgtttctgatatcaccatcaccttagcacatgaccacactctg
gtgcagaagcaaaacctgaccggcactgagcacatcatccgaggactcagaagtggacag
aagtaccttgttgtcattactggctaccagaaagcccaacccaaagtaacctacacaggg
acattcagcacgaagaccccggcacagaccaaggtgtccctggccaacatgatgctcaac
accgagccgctggaagggcctgagagtgtcacagatatctgtgggctgcaaaaagaagag
gggacctgcagaaactttgtgctgaaatggtactatgaccctgacaccaagagctgcgcc
cggttctggtacggcggctgcggaggcaatgagaacagatttaacacgcagaaagaatgt
gaaacagtttgtgtccctggtaacatcaaccctggcgtggtgacaacgatagaaacatag
DBGET
integrated database retrieval system
