Antrostomus carolinensis (chuck-will's-widow): 104533082
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Entry
104533082 CDS
T08541
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acar03009
]
104533082 (DDX52)
Enzymes [BR:
acar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104533082 (DDX52)
Ribosome biogenesis [BR:
acar03009
]
Eukaryotic type
90S particles
Helicases
104533082 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104533082
NCBI-ProteinID:
XP_010176750
LinkDB
All DBs
Position
Unknown
AA seq
624 aa
AA seq
DB search
MEAQELFRRLGAGARFDVRRFGEDARRFGVIKGSGGSVSLESLDFFGCKEEAPQESAEEG
CGLPGGEEEVEGGEQQKEDGAGKNGREMAGKRKRSAESGEGKRKKKKTRGAVASMPELSE
NNGIKWMSSLEAKVEDAKDKKPTAEKLERLRREKINRFRNRHRISVQGTDLPDPIATFDQ
LQKEYKIHPKIIENIQAAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFCIPLLA
HLKQPRNKGFRALIISPTRELASQTHRELVRLAEGTGFRIHMIHKAADAAKKFGPKSSKK
FDILVTTPNRLIYLLKQDPPAIDLTSVEWLVVDESDKLFEDGKSGFRDQLASIFLACTSH
LVRRALFSATFARDVEEWCKLTLDSVVLVSVGARNCAAETVEQELLFVGSETGKLTAMRE
LVKKGFAPPVLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQRDNVVRSFRAGKIWV
LICSALLARGIDFKGVNMVINYDMPTSAVEYIHRIGRTGRAGHTGKAVTFFTEDDKPLLR
SIASVIQRAGCPVPDYLKHLPKLQSKQKKKFIKKPLTRESICTTPQCFLKKAKRKTKTTK
ENIKEKKKVKEGKSGSKLQTGSES
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcaggagttatttcggcgcttaggtgccggtgctcggtttgatgttcggcgc
ttcggggaagatgcgcggcggttcggggtgataaaggggagcggtggcagcgtctcgctg
gagagcctcgacttcttcgggtgcaaggaggaagccccccaggagtctgccgaggaggga
tgtgggctcccagggggtgaagaggaggtggagggtggagagcagcagaaagaggatgga
gcagggaaaaacggcagagagatggcaggaaagagaaaaagaagtgcagaaagtggtgaa
gggaagagaaaaaagaaaaagacacgaggtgctgtagcatcaatgccagagttgtcagaa
aataacggaataaagtggatgtcctctctggaagcaaaagttgaagatgcaaaagacaaa
aaacctactgcagaaaagcttgaacgcttaagaagagaaaagataaaccgcttcagaaac
agacacaggatcagtgttcagggcacagatcttcccgacccaattgccacgtttgatcag
cttcaaaaggaatacaaaatccaccctaaaatcatagagaacattcaggctgctggcttc
caggtcccaacacccatccagatgcaggccattcccgtcatgcttcatggtcgggagctt
ctagcttcagctcctactgggtctggaaaaaccctggcgttttgtattcctctcctagca
catctgaaacaacccaggaacaaaggattcagagctctgatcatatcgcctacgcgagaa
ctcgctagccagacacatcgggagctggtgaggttggctgaggggacaggcttcaggata
catatgatccacaaggcagctgatgcagcaaagaagtttgggcccaagtcttctaaaaaa
tttgatatactagttactactccaaacagactcatttatttgctgaaacaagatcctcca
gcaatagacttgaccagtgtggagtggctggtggtggatgagtcagacaaactgtttgaa
gacgggaagtcggggttccgtgaccagctggcctccatcttcctggcatgcacatcccac
ctggtgagaagagccttgttcagcgcaacctttgcacgagacgtagaggagtggtgtaaa
cttacccttgacagtgttgttctggtgtctgttggagcgagaaactgtgcagccgagaca
gtagaacaagaactgttgtttgttggatctgagacaggaaaactaacggcaatgagagag
cttgttaagaagggttttgctcctccggtccttgtttttgtacagtctattgagagggct
aaagagcttttccatgaacttatttacgaaggcatcaatgtggatgtcatccatgcagac
aaaactcagcaacagagagataatgtagtacgcagtttcagagctgggaagatctgggtg
ctcatctgctcagccttactagctcgagggattgacttcaaaggtgtgaatatggtcatt
aattacgatatgcccacgagtgcagtggaatacatccacaggataggtcgtactggaaga
gcagggcacacaggaaaagctgtcactttctttacagaagatgataaacctttattacgg
agcatagccagtgttattcagcgagctggctgtcctgtgccagactacctcaaacacttg
cccaaactgcaaagcaaacaaaagaagaaattcattaagaaaccattgacaagagaatcc
atttgtaccacccctcagtgcttcttaaaaaaagccaaaagaaaaacgaaaactacaaag
gaaaatattaaggaaaaaaagaaagttaaagaaggtaaaagtggcagtaaattacagact
ggttcagaaagctga
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