Arcanobacterium canis: P7079_02025
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Entry
P7079_02025 CDS
T09058
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acas
Arcanobacterium canis
Pathway
acas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P7079_02025 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acas03021
]
P7079_02025 (rpoC)
03400 DNA repair and recombination proteins [BR:
acas03400
]
P7079_02025 (rpoC)
Enzymes [BR:
acas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P7079_02025 (rpoC)
Transcription machinery [BR:
acas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P7079_02025 (rpoC)
DNA repair and recombination proteins [BR:
acas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P7079_02025 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WFM83780
UniProt:
A0ABY8G105
LinkDB
All DBs
Position
460545..464504
Genome browser
AA seq
1319 aa
AA seq
DB search
MLDVNLFDQLHIALATSEDIRKWSHGTVTKPETINYRTLKPEKDGLFGEQIFGPTRDWEC
ACGKYKRPRYKGIVCERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLMDI
APKDLEKVIYFAAYMVTDVDEERRHNDLPSLTAEYELERENIIKDRDAAVERALKAEEAA
LAEAEAADADAATRAKIKRNAESDTRRVRRQYEEDLARLESVWDKFTKLKVGDLEGDEES
YREMNLRWGDYFEASRGAEAVQKRLKNFDLQAEHDLLVEQIETGTAQRKTRALKRIKVVN
AFLHSGIAPESMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLQRMLDL
NAPEIMVNNEKRMLQEAVDALFDNGRRGRPVQGAGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPTLKLHQCGLPKTMALELFKPFVQKRLVDLELAKNIKAAKRLIDRQR
DEVFDVLEEVIKEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIRLHPLVCSAFNADFDGDQ
MAVHLPLSVEAQAEARILMLSANNILKPSDGRPVTVPAQDMIIGLYHLTMLRPGAVGEGH
YFTSMAEAEMAKDLGKLNLEAECYIRFHAGDITLPRDWEAPEGYEEGDDIILKTSLGRAL
FNEALPTTFPYVNKVVNKKVLGSLVNELAERYPKVDVGASLDALKNTGYYWGGRSGVTIA
VSDVATPPNKAEILEKAEARAAKIEQDFQEGNIRDSDRRRDLVSLWTEVTDTVADEMRAH
FDDFNNINQMVSSGARGNWMQIRQVAGMRGLVADPKGEIIPRPIKSNYYEGLSALEYFTA
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREADCGTRRGLTKSIVEIDADRHEIR
LVNGQRVTEKEVSAADWAAGEVLPHEEIDTSVYARTLAKDAIDAEGNVVIAAGTDIGDVA
LEKMLAAGIKEISVRSVLTCDSRVGTCAMCYGRSLATGKLVDIGEAVGIVSAQSIGEPGT
QLTMRTFHTGGAASAEDITQGLPRVQELFEARTPKGEAPIVEAAGKLEIEDLERSRRLII
KRDDGDEDITYLVAKRAKLLVPEGSHVEVGQQLVEGSVDPKKVLRISGRRTAQLHLVSEV
QHVYRSQGVEIHDKHIEVIVRQMLRRVTVLDSGESTLLPGELVDVSVFEDANRATLANGG
KPASGRPELMGITKASLATDSWLSAASFQETTKVLTEAALNSKSDPLAGLKENVILGKLI
PAGTGLEMLRHATVEPTPEARSEYESVNSFVGNSGEYDDLYGYSSMDFDSGLGYGFNNF
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgacgttaatctgttcgatcagcttcatattgctcttgcgacgtcggaagacatt
cgcaagtggtcgcacggcacagtgaccaagccggagaccatcaactaccgcaccctcaag
ccagagaaagacggcttgttcggtgagcaaatctttggcccgacccgtgattgggagtgt
gcttgtggtaagtacaagcgcccccgttacaagggcatcgtctgtgagcgctgtggcgtg
gaagttactcgctccaaggtgcgccgtgagcgcatgggccacattgaacttgctgctcct
gtgactcacatttggtacttcaagggcgttccgtcgcgccttggctatctcatggatatc
gctccgaaggatctggaaaaggtcatctacttcgccgcctacatggtgacagacgtagac
gaggagcgtcgtcataacgaccttccatcgctcacggccgagtacgagcttgagcgcgaa
aacatcatcaaggatcgcgacgctgctgttgagcgagcactcaaggctgaagaggcggct
cttgctgaggctgaagccgccgacgccgatgctgcaactcgcgccaagatcaagcgtaat
gctgaatccgacacgcgccgtgtgcgccgtcagtacgaagaagaccttgcccgtctggag
tcggtgtgggataagttcaccaaactcaaggtcggtgatcttgaaggcgatgaagagtcc
taccgtgaaatgaaccttcggtggggcgactactttgaagcttcgcgtggtgcagaagcc
gtacagaagcgtctgaagaacttcgatctccaggctgagcacgatcttcttgttgagcag
atcgagactggtactgcccagcgcaagactcgcgcactgaagcgaatcaaggttgtcaac
gcgttccttcactcgggtatcgctcctgagtccatggttctcgatgcgattccggtgatt
ccgccggatctgcgcccgatggttcagctcgatggtggccgctttgcgacttcggatctc
aacgatctttaccgccgcgtgatcaaccgcaacaaccgtctccagcgtatgctcgatctc
aatgcgccggaaatcatggtgaataacgaaaagcgtatgcttcaggaagctgtcgatgcg
ctcttcgataacggccgccgtggccgccctgttcagggtgcgggtaaccgtccactgaag
tcgctgtccgacatgctcaagggtaagcaaggtcgtttccgtcagaaccttctgggtaag
cgcgtggactactcgggccgttcggttatcgtcgtgggcccgaccctcaagcttcaccaa
tgtggtcttccaaagaccatggctctggagctgttcaagccgttcgttcagaagcgtctt
gtggatctcgaacttgcgaagaacatcaaggcagcaaagcgcctgatcgatcgtcagcgc
gacgaagtcttcgacgtgctcgaagaggtcattaaggagcatccggtcctgctcaaccgt
gcgccaacgctgcaccgcctgggtatccaggccttcgagccacagctgattgaaggtaag
gcaatccgtctccacccgctcgtgtgttccgcgtttaacgctgacttcgacggcgatcag
atggctgttcaccttccgctgtctgttgaggcgcaggctgaagctcgtatccttatgctt
tcggctaacaacattctcaagccatccgatggtcgcccggtcaccgttccagctcaggac
atgattattggtctataccacttgacgatgctccgaccaggagccgtaggtgaaggccac
tacttcacgtccatggccgaggctgagatggccaaggatttgggcaagctcaatctcgag
gctgagtgctacattcgcttccatgccggtgacatcaccttgccgcgtgactgggaagct
ccggaaggttacgaagagggcgacgacatcatcctcaagacctcgctcggccgcgctctg
ttcaacgaagcgctcccgaccacgttcccgtatgtcaacaaggtcgtcaacaagaaggtt
ctcggctcgctcgtgaacgagctcgctgagcgttatccgaaggttgacgtcggtgcgtcg
cttgacgcactgaagaacaccggttactactggggcggtcgttccggcgtcaccatcgcc
gtgtctgacgttgcaactccgccgaacaaggcagagatcctggagaaggctgaagctcgc
gctgcaaagattgagcaggacttccaggaaggtaacatccgcgattcggatcgccgtcgt
gacctggtgagcctgtggaccgaagtgaccgatacagttgctgacgaaatgcgcgcccac
tttgacgacttcaacaacatcaaccagatggtgtcctcgggtgctcgtggtaactggatg
cagattcgccaggtggctggtatgcgcggtctcgtggctgacccgaagggcgaaattatt
cctcgcccgattaagtcgaactactacgagggcctgtccgctcttgagtactttacggct
acgcacggtgctcgtaagggcctggccgataccgctctacgtactgctgactcgggttac
ctcacccgtcgtctggttgacgtcgctcaggacgtcatcgtccgcgaggcagactgtggc
acacgccgcggcttgaccaagtcgatcgtcgaaatcgacgctgatcgtcacgaaattcgt
ttggtgaacggtcagcgtgtgacagaaaaggaagtttccgctgctgattgggcagctgga
gaagtcttgccacacgaggaaatcgacacctcggtttacgctcgtacccttgcgaaggat
gcgatcgatgctgagggcaacgttgtgatcgctgccggtaccgatattggtgacgttgcg
ctggagaagatgctcgcagcaggaatcaaggagatttcggttcgttccgttctcacctgt
gattcgcgcgtgggtacttgcgcaatgtgctacggccgctcgctggcaaccggcaagctg
gttgatatcggtgaagccgtcggtatcgtctcggcacagtcgattggcgagcctggtact
cagctgacgatgcgtaccttccacaccggtggtgcggcatcggcagaggacattacccag
ggtcttccgcgtgttcaggagcttttcgaagcccgtacaccaaagggtgaggcaccgatc
gttgaggcggctggcaagctggagattgaggatctggagcgttcgcgtcgcctgatcatc
aagcgcgacgacggcgacgaggacatcacgtaccttgtggcgaagcgcgctaagcttctc
gttcctgaaggatcgcacgtcgaagttgggcagcagcttgttgagggttcggttgatccg
aagaaagttctgcgcatctctggtcgtcgtacggcacagcttcacctcgtttccgaggtt
cagcacgtgtaccgctcgcagggtgtggagattcacgacaagcacatcgaggtgatcgtt
cgccagatgctacgccgtgtcacggttctcgactcaggcgaatcgacgcttctgccaggt
gagctcgttgacgtctccgtcttcgaagacgccaaccgtgcaaccttggcgaacggcgga
aagccagcttcgggccgtccagagcttatgggtattaccaaggcttcgctcgctactgac
tcgtggttgtcggctgcatcgttccaggagaccacgaaggttctgactgaagcagcgctg
aactccaagtctgatccgctcgcgggtctgaaggagaacgtcatcctcggtaagctcatc
ccggctggtaccggtctggagatgctacgccacgccacggttgagcccacacctgaagcg
cgctcggagtatgagtcggtgaattccttcgttggaaattccggtgagtacgacgatctt
tacggttactcatcgatggattttgactccggcctcggctacggattcaacaacttctga
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integrated database retrieval system
