Arcanobacterium canis: P7079_04410
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Entry
P7079_04410 CDS
T09058
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acas
Arcanobacterium canis
Pathway
acas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P7079_04410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acas03019
]
P7079_04410
03009 Ribosome biogenesis [BR:
acas03009
]
P7079_04410
Enzymes [BR:
acas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P7079_04410
Messenger RNA biogenesis [BR:
acas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P7079_04410
Ribosome biogenesis [BR:
acas03009
]
Prokaryotic type
rRNA helicases
P7079_04410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
DeaD_dimer
CMS1
HEM4
Cas3-like_C_2
adh_short
DUF6892
MatB
Motif
Other DBs
NCBI-ProteinID:
WFM82661
UniProt:
A0ABY8G0G7
LinkDB
All DBs
Position
979489..981447
Genome browser
AA seq
652 aa
AA seq
DB search
MDIFVTTFSELSLPENLLQAVTELGFTQPTEIQEQAIPHLLNGHDVIGVAQTGTGKTAAF
GLPLLTHVDAEKDEVQALVLAPTRELAMQGADAISTFAAKTGGLEVVSVYGGSPYGPQLR
ALERGAQVVVGTPGRIMDLIDRKALVLSHVTYFVLDEADEMLRMGFAEDVDTIAASLPKE
RITALFSATMPSSIRKVAQEHMNDPVEVTVTRPASTTDTIHQTYAVVPSRHKTGALARVL
ATTEADAALVFVRTRATAEDLTIELSTRGVQAAALSGDVAQKDREKLVNRLREGSIDVLV
ATDVAARGLDVERIGLVVNYDVPKEIDTYVHRIGRTGRAGREGTSLTFVTPKEKFRLRRI
EKTTGAQMEEVDLPTPAQVSALRASRLIESAIERVGIGRLSVYEKAIEEFLAQQADSESP
MSLEQLAYGLIAMGVRDPGPRGDDEPEHLSVRGGRDDRSREDRGGRGRDKSGRKTFAHNG
TMYRVDVGKKDGVAPGAIVGALTNEGGLTGSQLGKIDIYPTFSLVEIAHELDERTISKIS
RAQVSGRELGIRKDHGPAKGARGSFKRDGGFNKREGGLGHRRNRDDFDRRPIRDYIDDPD
QQSRRDRERSARDPYELRKARADRAFGDRRKSNERRGFRKNGLRKGDFRKGR
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
ttggatatttttgtgaccacattttctgaactttccctgcccgaaaaccttcttcaggct
gtgactgaactcggttttacacagcccaccgagatccaagaacaggccattcctcatctc
ctgaatggccatgatgttatcggtgttgcacaaaccggaacaggaaaaaccgccgccttt
ggacttccgcttctgacccacgtcgacgcggaaaaagacgaagtccaagcactcgttctc
gcaccaactcgcgaacttgcaatgcagggtgctgacgcgatttcgacgtttgctgcaaaa
accggtggactcgaagtcgtctcggtctacggcggttcgccctacgggccgcaattacgc
gcacttgaacgcggggcacaagttgttgttggaacgcccggtcgtatcatggatctcatt
gatcgcaaggcactggtcctctcacatgtgacatactttgtgctcgacgaggccgacgaa
atgttgcgtatgggcttcgcagaagacgtcgatacgattgccgcatccttgccgaaggaa
cgcatcactgctctgttctccgcaaccatgccttcctcgatccgcaaggttgcccaggag
catatgaacgacccagtcgaggttaccgtaacgcgtccggcttcaacgactgataccatt
caccagacttacgcggtggtgccctcacgtcataaaactggcgcattggctcgagtcctc
gctaccaccgaggctgatgctgcgctcgtgttcgttcgcacccgtgcaacggcggaagac
ctcacgatcgaactttcgacacgcggcgtccaagccgctgcactctctggcgatgttgct
caaaaagatcgcgaaaaactcgttaatcgtctccgtgaaggttccattgatgtcctcgtc
gcaaccgacgtcgccgcgcgtggcctcgacgtcgaacgcatcggtctcgtcgtaaattac
gacgtccccaaggaaattgatacctacgtgcatcgtatcggccgcactggacgtgcaggt
cgcgaaggaacatcgctgacattcgtcacgccaaaggaaaagttccgtctgcgccgtatc
gagaaaacgactggcgcccagatggaagaagttgatcttccaacccctgcacaagtatct
gcgcttcgtgcaagccggcttattgaatcagcaatcgaacgcgtcggtattggtcgcctg
tcggtctacgaaaaggcaatcgaagagttccttgcgcagcaggctgactctgagtcgcca
atgagcctggagcaacttgcatacggtctgattgcgatgggcgtacgtgacccagggccg
cgtggcgatgacgagcctgaacatctgtccgtccgtggaggtcgcgatgaccgttcacgt
gaggatcgtggtggacgcggacgtgacaagagtggccgtaaaacctttgcgcataacgga
acaatgtaccgcgttgacgtcggtaagaaggacggcgtggctccaggagccatcgttggc
gctttgactaacgaaggcggcctcacgggttcccagctgggcaagattgatatctacccc
accttctccctagtcgagatcgcgcatgaactcgatgaacgcacaatctccaagatttct
cgcgcacaggtttctggtcgtgagctgggcattcgtaaagatcacgggcctgcaaagggc
gcgcgcggatcattcaagcgtgacggcggtttcaacaagcgagagggaggcttgggacac
cggaggaaccgcgatgattttgaccgacgccccatccgtgactacattgacgaccccgat
cagcaatcgcgacgagatcgtgaacgttctgctcgagatccatacgaactgcgcaaagca
cgtgctgatcgtgccttcggtgatcgacggaagtcgaacgaacgcagaggctttcgcaag
aatggccttcgcaagggtgatttccgaaaagggcgctaa
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