Aquarana catesbeiana (American bullfrog): 141102796
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Entry
141102796 CDS
T11018
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04510
Focal adhesion
acat04512
ECM-receptor interaction
acat04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141102796
04518 Integrin signaling
141102796
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141102796
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Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
Fib_alpha
Tropomyosin
COG6_N
CC_Bre1
LXG
F5_F8_type_C
AlphaC_N2
Dak2
Motif
Other DBs
NCBI-GeneID:
141102796
NCBI-ProteinID:
XP_073447909
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All DBs
Position
LG07:24820285..25004144
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AA seq
1843 aa
AA seq
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MTFRRTIWRQERLSFILVALLLIVRGEEPDTIQQGCTNGGCYPATGNLLTGRDNNLGATS
TCGMESSQEYCIVSHLSESEKCFICDSRVPYQRGSHRIQNVIYLTGPDGEKTWWQSENGV
ETVSIRLDLEAEFHFTHLILKFKTFRPAGMLIERSADFGRTWKVYRYFSYNCTKMFPGVP
VHALQKIDDVICDQRYSDIEPSTEGEVIFKVLDPAIKVEDPYSLEIQELLQITNLRINFT
KLHTLGDNLLDQRAEVLQKYYYAVYELVVRGSCFCYGHASECSPVEGIEGGVEGMIHGRC
VCKHHTVGLNCELCQDFFHDLPWRPAEPDNPHSCKKCNCNNHSTKCHFDMAVYLATGGVS
GGVCDDCHHNTMGRNCELCKPFYYLNPWSDIRAETACVPCDCDPVGSLDGGVCDSHTNVN
LGMIAGQCRCKENVKGERCDSCKENFYGLSRNDPLGCQPCQCDPRGIVAGNSPCDQISGD
CYCKRFVTGRYCNQCLPEFWGLSNDMMGCRPCNCDFGGAYNNRCSLEDGQCECRANIIGR
QCEDAQPGYFCMPLDYYTYEAENAKGLSPTDPQTPVMVIPKPESQTDCVEYYNAIQNGKK
VRLRRHRRTIRILQQRAAKRRVRQLHQRADIEIIRREHSPDHMITWTGPGFARVRDGAGL
LFHIDNIPYPMEYDIMIRYEPESAEDWEAIVSVTSQILPMSPRCGNVLPSEQMYREKLPH
SERYLVLSKPFCFENNNQYEISIRFQRLEATNRQPGSFILVDSLVLLPKVYELPGFHGND
PVSTHHREEMETYRCLESFKMATMPVLAEMCIKLLCSISAIVHNGALPCLCDLQGSLSAV
CNKIGGQCMCKPNVIGQRCDQCAPGTYGFGPYGCSKCDCDSQGSISRFCNPVTGQCQCHS
SVAGRQCNQCLPGQWGFPHCKPCQCNGHSEDCDPRNGACISCRDFTSGRHCEKCLDGYYG
DPILGTGQQCRPCPCPGYPGTQNYHGSSCYADRDSSHIVCLCAPGYTGSRCDRCSPGYFG
NPDQDGGECRPCQCNNNIDPTDPEACDSRTGMCLNCLHNTDGHHCGECKAGYFGSAILRN
CRRCTCNELGTLHSHCTRDTCYCDRVTGHCPCRANVIGKNCDQCAPNYWNLGADLGCELC
ACLPEHSLRQDCNVYTGQCHCQPGFGGRVCSQCQENFWGDPKRRCEACNCDAYGSEIRQC
DHRTGMCHCRDGFTGQRCNQCARGFRDNYPRCSACHQCFYQWDATISELQNQLRVIQKKV
SDLQDGVEAPELSNILIKDLEDKLRIIKQIIGEGTIEGTRMLEQMNKLVNKIRTEVAQLS
FKLHSQEKRMNDTMTKDGRQKEKLDKLNIELSLLNVTMHKLKTQTEAIAASGFNETYGSI
LKAYLDSTAAERLANDSVYGPGSPVSHSKETRDETERLLKEELDNYRRNMTAHRTSLKEL
QKKAKDLNVFKINEKICGAPGDKPCDQAPCGGANCKDDQGKRKCGGENCNGALPISAKAL
ASAQNVKTDLENMATQLNDISEKIQEVQNIAQEAKEKSESTLNKAKDTKRKIEDSTEKLR
AFIRKIKDFLTEEGADPESIELVARQVLNISLPASPGDIAALIKQITDSIGNLSEVDMIL
NVTSESVNAAKLLLQKAVEARERADGVSGNIAETKSLLEEAGNKAKVAEKALNATEQRIN
RLKNTVDNALKNLTGVELKENSIMDRLTKVAEEVEALMKKVDSNRQMANEANQKATKAML
ATDGLDKEMEEVKKNYRDLKDKVGGVDTSSGSAMQKVQQIKEEAQDLLKKATDAKEKLDK
LDQKFKDNEENMNKKMEELQDLENRTMILLNFIREKSNVYATC
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgactttcaggagaacaatatggcgacaggagcggctttctttcatccttgtcgctcta
cttctgattgtacggggtgaagagccagacacaatacaacaggggtgtaccaatggagga
tgctaccccgccacaggaaaccttctcactggtcgagacaacaacctcggcgccacatcc
acatgtggaatggaatcgagccaggaatactgcattgtcagccatctctcggagtcggag
aagtgtttcatctgtgactcacgggtgccctaccaaagggggagccacaggattcaaaat
gtcatttacctgacgggacccgatggagagaagacatggtggcaatccgagaacggagtg
gaaacagtaagcattcggctcgatttggaagcagaattccattttacgcatctcatcctg
aaattcaagacgttccgaccagctggcatgttgatcgagaggtcggcagattttgggcgc
acttggaaagtatatcggtatttctcctataattgcaccaaaatgtttcccggggtcccg
gttcatgccttgcagaagattgatgacgtgatttgtgatcagagatactcagatattgaa
ccgtccacggaaggagaggtgattttcaaagtccttgacccagctatcaaagtagaagat
ccctacagtttggagatacaagagctccttcagattacaaacttgaggatcaatttcacc
aagcttcacacgttgggagacaatctgttggatcagagggcagaagtcctacagaagtat
tattacgcagtgtacgagttggtggtccgtgggagctgcttctgttacggacatgcctcg
gagtgctcccctgtggaagggattgaaggaggagtggaaggaatgatccacggccgatgc
gtctgcaaacatcacacggtgggcctgaactgtgagctgtgccaggacttcttccacgat
cttccctggagaccagcggaacccgacaacccccattcctgcaaaaaatgcaactgtaac
aatcactccacaaagtgccactttgacatggcggtgtatctggccaccggaggggtgagc
ggcggcgtatgtgatgactgtcaccacaacaccatggggcgcaactgcgagctgtgcaaa
cctttctactacctgaacccctggtctgatatccgggcagagacggcctgcgtcccctgc
gactgtgatccggtgggctccttggacgggggggtctgcgacagccacaccaacgtcaac
ctggggatgatcgcagggcaatgccgctgcaaggaaaatgtgaaaggggaacgttgtgac
agctgcaaggaaaacttctatgggctcagcagaaacgaccctctggggtgtcagccatgc
caatgtgaccctcgtgggatcgtggcgggtaacagcccctgtgaccagattagcggtgac
tgttactgtaagagatttgtgacggggcgatattgtaaccagtgtctgccagagttttgg
ggtcttagcaatgacatgatgggatgtcggccttgtaactgtgattttggaggtgcttat
aacaacaggtgttccttggaggatggtcagtgtgaatgccgagccaacatcatcgggcgt
cagtgtgaggatgcgcagcctggctacttctgcatgccgctggattactacacatatgaa
gcagagaacgccaaggggctctccccaacggacccccaaacaccggtaatggtaatcccc
aaaccagagtctcagacggactgtgtggagtactacaacgccattcagaatggaaagaaa
gtgaggctacgccgacaccgaagaaccatccgcatcctgcaacagagggcggccaagcgg
cgagtacgccaactgcatcaaagggcagacattgagatcatccgccgtgaacactctcca
gatcacatgatcacctggaccgggcctggcttcgctcgagttagagatggtgctggcctc
ttgtttcacatcgacaacatcccataccccatggagtatgacatcatgatccgatatgag
ccggagtcagcagaggattgggaagccatcgtcagtgtgacgtctcagatattgcccatg
agcccccgctgtggcaatgtgctgccctctgagcagatgtatagggaaaaactgccacat
tcagagaggtatttggtgctctcaaagcccttttgctttgaaaataacaaccagtatgaa
atcagcatccgcttccagcgtttggaggccaccaatcgacaaccaggatccttcatcctc
gttgattcgctggtccttctgcccaaagtctatgaactgcccggtttccatggcaacgac
cccgtatccacacaccaccgagaagaaatggagacctacaggtgcctggagtccttcaag
atggccaccatgccggtcctggcagagatgtgcatcaagctgctgtgtagtatctccgcc
atcgtccacaacggagctctgccctgtctgtgtgatttgcaaggctcgctcagcgcagtg
tgcaacaaaatcggagggcagtgtatgtgtaagcccaacgtgattggccagcgctgtgac
cagtgcgctcctgggacctatgggtttggcccgtatggatgcagcaagtgcgactgtgac
tctcagggctccatctcccggttctgcaaccccgtaacgggccagtgtcagtgccacagc
agtgtggctgggaggcagtgcaaccagtgccttccgggacaatggggcttcccccactgc
aagccctgccaatgtaatggccactccgaggactgtgaccccaggaacggagcctgcatc
agctgccgagatttcacgagtgggcggcactgcgagaagtgtctggatggctactacgga
gatcctattcttggcactggccagcagtgccgtccctgtccttgtcctggctatcccggt
actcaaaactaccacggcagctcctgctacgcggaccgagactccagccatatcgtgtgc
ctgtgcgctcctggctatacaggttcacgttgtgatcgctgctcccccggttactttggg
aacccggaccaagatggcggagaatgtcgcccttgtcagtgtaacaacaacatcgatccc
accgatcccgaagcatgtgactcgaggactggcatgtgcttgaattgtctccacaacact
gatgggcatcactgcggagagtgcaaagctggttattttggcagcgccattctgcgcaat
tgccgccgctgtacctgcaatgagctgggcaccctgcattcccactgtacaagggacacc
tgctactgtgacagggtgactgggcactgcccttgccgggcgaatgtcatagggaagaac
tgcgatcagtgtgcccctaactactggaaccttggagcggacctgggctgtgagctgtgc
gcctgcctgccagagcactccctgagacaggactgcaatgtgtacacagggcagtgccac
tgccagcctggctttggagggagagtctgctcacagtgccaggagaatttctggggtgat
ccgaaaagaagatgtgaagcttgtaactgtgatgcgtacggctcagagatccgacagtgc
gatcaccgtacaggaatgtgccactgccgggatgggttcaccgggcagcggtgtaatcaa
tgcgccagaggtttccgggacaattatcccaggtgttccgcctgccaccagtgcttctac
caatgggatgccaccatctccgagctccagaaccagcttcgggttatacagaagaaggtg
tccgacctgcaggatggagtggaagctcctgagctcagcaacatcctcatcaaagatctg
gaggacaaactcaggatcatcaaacaaattatcggggaggggaccatcgaagggacgcgc
atgctggagcaaatgaacaagctggtcaacaagataaggacggaggtggcccagctctcc
ttcaaactacattcccaggagaagaggatgaatgacaccatgaccaaggacggaaggcaa
aaggagaaactggacaagctgaacatagagctcagcctgctcaatgtgaccatgcacaaa
ctcaagacgcagacagaagccatcgcagcctcagggttcaatgagacatatgggagcatc
ctgaaggcctatttagattccacagctgctgagagacttgccaatgactctgtatatgga
ccgggtagtcccgtgagccattcaaaggaaacacgagatgagacagagaggcttctgaaa
gaggaactggacaattaccgaaggaacatgaccgcccatcggacctcgctaaaagaactg
caaaagaaggccaaggatcttaatgtctttaaaatcaatgagaagatttgtggagcaccg
ggggacaagccttgtgaccaggctccatgtggtggagccaactgcaaggatgaccagggc
aagaggaaatgtggtggagagaactgtaatggagctctgccaatctcagcaaaggccctc
gcctctgcccagaatgtcaaaacggacctggaaaacatggccacccagctgaatgacatc
tctgagaagatccaggaagtccaaaacattgcccaagaagccaaagagaaaagtgaatcc
accttgaacaaagccaaagacaccaagcggaaaattgaagactctaccgaaaaactcaga
gctttcattaggaagattaaagatttcctaactgaggaaggagctgacccagagagcatt
gaactggtagcaaggcaggtgctgaacatctcactcccggccagtcctggagatatcgct
gctctcatcaaacagatcacagacagcattggtaacctcagcgaggtggacatgatcctt
aatgttacatcggagagcgtaaacgctgccaaactgctcctgcaaaaagctgtggaggcc
agagagagagctgacggggtgagcggaaacattgccgaaaccaaatctctgctggaggag
gccgggaacaaagccaaggtcgcagagaaggcgctgaatgccaccgaacagaggatcaac
aggttgaagaacaccgtggacaatgccttgaaaaatcttacaggtgtggagttaaaggag
aactccataatggatcgtttgaccaaggtggccgaggaggtggaagctttaatgaagaaa
gtggattccaacagacagatggccaacgaagcaaaccaaaaggccaccaaggctatgctg
gccacagacgggcttgacaaggagatggaagaagtcaagaagaactacagagacctgaaa
gacaaggttggaggggtggacacctcctcagggtcagccatgcagaaagtacaacagata
aaagaggaggctcaggatttgttaaagaaagcgacggacgccaaggaaaagctggataag
cttgaccagaagttcaaagacaatgaagagaacatgaacaagaaaatggaggaacttcaa
gacctggagaatagaacgatgattttactgaattttatcagagaaaagtccaatgtctat
gcaacttgttag
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