Aquarana catesbeiana (American bullfrog): 141103253
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Entry
141103253 CDS
T11018
Symbol
TNRC6B
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6B protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141103253 (TNRC6B)
Chromosome and associated proteins [BR:
acat03036
]
Eukaryotic type
Gene silencing
piRNA pathway
141103253 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
141103253
NCBI-ProteinID:
XP_073448755
LinkDB
All DBs
Position
LG07:complement(115430373..116244733)
Genome browser
AA seq
1845 aa
AA seq
DB search
MREKHLKKAAPREKEQEREEQLMEDKKRKKEDKKKKDAAQKVTEQKTKVPEATKPSSSQA
TAASLPGSSPSPPVNGGNNAKRVAVPNGQPPSTARYMPREVPPRFRCQQDHKVLLKRGQP
PPASCMLLGGGAGTPPSSTAPGAGPGNAQPGAGALLSGESGTATDASSGAAATSSYANST
WGSGAPSGSGPTTNPPHAWDKVIVDGSDMEEWPCIAGVDTEPPSDNATDNSASNQASEKG
SLQGSATNHKGRGGQSQHQQPGNECIQGVWKADPKAKPVPSSNPATEGVNRLGNWRSMGG
SERTGPASGFNNFNPNTNPAAWPALVQEGSRKANQESEGSFSSAQLGSTGLTSREQQSKM
ENAGAGFSVSSRETATTHHTDGPKNGNTNSTNSNTSNPLENKGTAFGVGSGDTCRGSDPS
AQSTGDRKIGAMASWGQTRGQPVPGDANCGLSNSGNNGREREDTRKLSSSHRPNGSRGES
WDSKSSGNGSWGYGPQTDPSELKWGEGNKLMAGGVSQGEWKQPSGHEDLKVGEWGGSSQG
NSSTGAWDNQKGHSLSENQGSASSASCWGRAPSSAGSEAGGQSTGSNPKAGGSGDSLNSG
SRRSHRSTLPDSQAVLQSLLNRTDLDPRVLSNSGWGQTQIKQDAAWETEEVKTRPEGKAD
RGTEGWENTSQAKSSGGWGDTPSQSNQSKSGWGESAPVPSGQEWKDTKATGWNDYKNSAT
GWGGGGGNGGGVGRQDEKAGPGWNNDNGASSEQGWGSRQPAPGSGWSAGKNGWVGSNSED
IEPPKGPGGWDGSGNKASSGWGDIGQNDVGSWSNGAGSNSATRTNWEENKRSQGGGSWGD
TARAPVSWNKQQEATQAAPSTGSWGSQAPPPPGNGRQPPTPGWKGGPTPTVSKEEEPSGW
EEPSTSSISRKMDIDDGTAAWGDPNSYNYKNVSLWDKNAQGTPSQMPREQGMPGSIASKG
APSVWGKNKGPPADNGTAAWGEPSEPASGWGEAEETGPPTPGWGNTPPVAPSAMKTGTKS
MQDGWGESEAPVTGTRHSSWDEEEEGGVWNSAGSQGSGSSHNSAGWGQGGKKPQIKGSLK
GGNSDSWINPLSKQFSNMGLLSQVDDPSPSKMDHPVGVLPEKKFEADKRGVNLGDFNDMM
RKDRSSFRLPNSKEMGAADSGPYFEKLTLPFSNQDGCLGDEAPCSPFSPSPSYKLSPSSS
SLPSMGLGAIGSGLNPQTFAARQGGNHGLFGNSGAQSRGMHNPVPSLNSSPNLRAQVPPQ
FLSPQVSASMLKQFPNSNMSPGLFNMGPQLSPQQIAMLSQLPQIQQFQLACQLLLQQQQQ
QQQQQLLQNQRKISQAVRQQQEQQQLARMVSALQQQQQRQPGMKHSPSHPAVSKSHLDPV
GISDMQSKGHMQGYGSGFSSSAMDYGKEAGAESRFKQWTSMIDGLPSSVSQDVSLHKNGS
IAPPTKNPGSSPYNQFDMMSGESVGLHGGPTAESWLPAKSPPSKMGSKSINTSWPPEFQP
GVPWKGIPNIDPESDPYVTPGSVLGGPAPSPIVDTDHQLLQDTPTGSNSSLNTSLPSPGA
WPYSASENIHSTSALSAKFGDYKSTWSPDPIGHNPSHHSNKMWKNQMSRNSPGLPRPPPG
LTNHPKATNSPWNSTAPRSVRGWGGQDSRITSGSTWSDGSSVRPSYWLILLNLTPQIDGS
TLRTICMQHGPLLTFHLNLTQGTALIRYSTKQEAAKAQNALHMCVLGNTTILAEFATDEE
VSRYLAQAQPPTPSAPGAGWQPLEVGQNHQAEPVGPALNLFGGTTGLGQWSSGGGGSDLP
GVSLWGTPSYTSSLWGVPNTEDAHRMGSPAPLLPGDLLGGGTDSI
NT seq
5538 nt
NT seq
+upstream
nt +downstream
nt
atgagggagaaacacttgaagaaagctgccccaagagagaaggagcaagaaagggaagaa
cagttaatggaagacaagaaaaggaagaaagaggataagaaaaagaaagacgctgctcag
aaggtcacagaacaaaaaaccaaagtgcccgaagcgacgaaaccaagttcaagccaagcg
acggccgccagcctacctggcagttccccctcgccaccagtcaatggtggcaacaatgcc
aaaagggtggcagtgccgaacggacaaccgcccagcaccgcccgctacatgcctcgggag
gtgccaccacgattccgctgccagcaggaccacaaagtgttactaaagcgtgggcagccc
cctccagcatcctgtatgctgttggggggaggagcagggactccaccctcctccactgca
ccaggggcaggcccaggcaacgcacagccaggggcaggagcactgctgtcgggggaaagt
ggaactgcaacagatgcatcgtcaggggcagctgctacttcaagttatgcaaattccact
tggggttcaggagccccctccggcagtggccctaccacaaaccctccccacgcctgggac
aaagtgattgtagacgggtcggatatggaagaatggccgtgcatagccggtgtggacaca
gagcccccttctgacaatgccacagacaacagtgcctcgaaccaagcctcagagaaggga
tccctacaaggaagtgccactaaccacaaaggaagggggggccagagccaacatcagcag
cctggcaacgaatgtatccagggggtatggaaagctgaccccaaggctaagcccgtcccg
tcttccaaccctgctacagagggagttaatagactgggaaactggaggagcatgggtggt
tctgagagaacaggacctgcctctggtttcaataactttaacccaaatacaaatccagct
gcctggccagccctggttcaggagggcagcaggaaagcaaaccaagagtcagaaggcagc
ttctccagtgcacagcttggctctacaggtctaacctctcgggagcagcagtcaaagatg
gaaaatgcaggtgctggtttttcagtctcgagcagggagactgccacaacccaccacact
gatggaccaaaaaatggaaacactaactctacaaactcaaatacttcaaacccccttgag
aacaagggaacagcctttggggtagggtcaggggatacttgccgaggttcagatccctct
gctcaaagcactggagatagaaaaattggagcgatggcttcttgggggcaaactaggggg
cagcctgtcccaggagatgccaactgtgggctcagcaattctggaaataatggacgagag
agggaggatacaaggaagttgtcttcatctcataggcccaacgggtccaggggagaatct
tgggacagtaaaagtagtggaaatggttcttggggatatggcccacaaactgatcccagt
gagttgaaatggggtgaaggaaacaagttgatggctggaggagtgtctcagggagagtgg
aagcagccgtctgggcatgaggacttaaaagttggagaatggggtgggtcaagtcaagga
aattctagcactggagcatgggacaatcagaagggccattcactatcggaaaaccagggc
agcgcatcatcagcgtcttgctggggccgggcccccagctctgcaggaagtgaggcaggg
gggcaaagcactggaagcaatcctaaggctgggggcagtggagacagtctgaactctggc
agtcgacgttcacataggtctactctcccagacagccaagctgttttgcagtccttgctt
aatcgaacagacttggatccccgagtactctccaactcgggctgggggcaaacccagata
aagcaggatgcagcatgggagactgaagaagtgaaaactcgacctgaaggcaaagcagac
cgtgggactgaaggatgggaaaacacatcacaagcaaagagctcagggggctggggggat
acccccagccaaagcaatcaaagcaagtctggttggggagaatctgctcctgttccatct
ggtcaagaatggaaggacactaaagcaactggctggaatgactataaaaatagtgcaact
ggttggggagggggtggaggtaatgggggtggggttggacgacaggatgaaaaggcaggt
cctggttggaacaatgataatggtgcaagttctgagcaaggatggggttctcggcagcct
gcgcctggaagtggatggtctgctggaaaaaatggatgggtgggaagcaacagtgaggac
atagagcctcccaaaggccctgggggctgggatggctcaggaaacaaagcttcctctggc
tggggggatataggacagaatgatgttggctcttggagtaatggggctggctcaaactca
gcaactcgaactaactgggaagagaataaaaggtcccaaggtggaggtagttggggagac
acagccagggctccagtttcttggaataagcagcaggaagctacacaggctgctccatct
actggctcctggggttcacaagctcctccacctcctggaaatggtaggcagccacccacc
cctggttggaagggtggccctacaccaacagtgtccaaggaagaagaaccgagtggctgg
gaggaaccatcaacatcatctatcagccgtaaaatggacattgacgatggtactgcagct
tggggggatcctaatagttataattacaagaatgttagcttgtgggacaaaaatgcccaa
ggaaccccttcacagatgccacgggagcaaggaatgcctggatctatagccagcaaagga
gcaccttcagtttggggcaaaaataagggtcctccagctgacaatggcactgcagcttgg
ggtgagccgtctgaacctgcttctggatggggggaagcagaagaaactggacctccaacc
ccaggctggggaaacacaccccctgtagctcctagtgccatgaaaactggtacaaaatct
atgcaagatggctggggagagagtgaagcaccggtgacagggacacgtcacagcagttgg
gatgaggaagaagagggtggtgtctggaacagtgcaggatctcagggaagtggctcctcc
cacaactcagcagggtggggccaaggaggaaagaaaccacagattaagggttcccttaaa
ggagggaacagtgattcctggataaatcccttgtccaagcagttttcaaacatgggatta
ctgagccaagtggatgacccatctcccagtaagatggaccaccctgttggtgtcctgcca
gaaaagaagtttgaggcagacaagaggggagttaatctcggggactttaatgacatgatg
cggaaggaccggtccagtttccgtctgcccaattccaaagagatgggagctgcagacagc
gggccttattttgagaagctgactttgcctttctccaatcaagacgggtgccttggggac
gaggctccatgctctcccttttctccctcccccagctacaagctatctccctccagctcc
tcgctcccttccatgggcctgggggctatcggttcgggcctcaacccccaaaccttcgct
gctagacaaggtggcaatcacggtctgttcgggaacagcggtgcacaatcgcgaggcatg
cacaaccctgtgccatcgctcaactcctctcccaacctccgggcacaagtgcctccccag
ttcctctctccacaggtctcagcctctatgctgaagcaatttccaaacagtaacatgagt
ccaggactgtttaacatggggcctcagctctctcctcagcagatcgccatgctcagccaa
ctccctcaaatccagcagtttcagctggcctgccagcttcttctgcagcagcaacaacag
cagcagcagcagcagcttctccagaatcagaggaagatttcacaggctgtcagacagcaa
caagaacagcagcagttagcacgaatggtaagtgcactccaacagcaacagcagaggcag
ccaggaatgaaacactctccttctcatccagctgtatctaagtctcacctggatcctgtg
gggatttccgacatgcaatccaaagggcacatgcaaggatatggctctggttttagctcc
agtgcaatggattatggaaaggaagctggggcagaatctcgtttcaagcagtggacttcg
atgatcgatgggttgccttcctctgtctcacaagatgtcagtttgcataagaatggctct
attgctcctcctacaaagaatcctggtagctccccatacaaccagtttgatatgatgtct
ggagaatctgtaggattgcatggagggccaactgctgagagttggctaccagccaaatcc
cctcctagtaaaatgggaagcaaatcaattaataccagctggccaccagagtttcagcct
ggtgtgccatggaaaggaattccgaacattgacccagaatcagacccttatgttaccccc
ggtagcgtgctggggggtccagccccatctcccatcgtagatactgaccaccagctactg
caggacacccctacagggtccaattcttcccttaacacctcgctgccttcacctggtgcc
tggccctacagtgcctctgagaatatccacagcacttcagcactctcagcaaagtttggc
gactataaatctacctggtcaccagaccccattggacacaatccatcacatcactcaaac
aagatgtggaagaaccaaatgtccaggaatagccctgggctgcctcgcccccctccaggg
ctcaccaaccaccccaaagccaccaattctccatggaacagcacagcccctcgctctgta
agaggatggggtggtcaggactcaaggatcacatctggatctacctggagtgatggcagt
tctgtgcgtccaagttactggctgattcttcttaatcttacaccacagatcgacggttcc
accctccggacgatctgcatgcagcatggccctctcctgacattccatctcaacctcacc
cagggcacagctcttatccgatacagcaccaaacaggaggcagccaaggcccagaatgcc
ctacacatgtgcgtcctgggtaacacgaccatcctggcggaatttgcaacggatgaagag
gtgagccgttatcttgcacaagctcagccaccaacaccttctgctcctggcgcaggctgg
cagccattggaagtgggacagaaccatcaggctgaaccggtagggccagccctaaacctt
ttcggagggaccacagggctgggacagtggagcagtggtggcggtggtagtgacctgcca
ggcgtgtctctttggggtactccaagctacacatccagcctgtggggggtgcccaacaca
gaggatgcccaccggatgggcagccctgcccctttgctacccggtgatcttttgggagga
gggaccgactcaatatga
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integrated database retrieval system
