Aquarana catesbeiana (American bullfrog): 141103599
Help
Entry
141103599 CDS
T11018
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141103599 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141103599 (SMG7)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
141103599 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
141103599 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
141103599
NCBI-ProteinID:
XP_073449467
LinkDB
All DBs
Position
LG07:275636221..275782084
Genome browser
AA seq
1169 aa
AA seq
DB search
MSLLCAQYLRQAEVLKADMTESKPGTAETWTSRQALQDLYQKMLVTDLEYALDKKVEQDL
WNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCR
VKSSQLGIISNKQMHCGTVVKPQSSSCAYICQHCLVHLGDIARYRNQTSQAESYYRHAAQ
LVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESREEV
KKRWGVSDFIKAFIKFHGHVYLTKNLDKVSPLREQLEEQFKNMLFQKAFNAQQLVHITVI
NLFQLHHLRSFGTEAEQQSFSTEEELCWSQLLTLFMSFLGILCRSPLKTHHCDDTSCADP
LPAIKVSLDWMKLRPSVFQEAAVEERQYVWPWLISLLNSFHVLEEDLASANMLPLPEEFE
LQGFLALRPAFRNLDFSRGHQAIIGDRETQHRQMRPVRLVSSGKWICENQPRLMQCRSIE
GEINFSTDIPELMIEDTVDAEDRSSPHDKYAETQRSEGSPGLKSVLSTGRSLSCESSEKP
VVTFKENIKPQEVNRELPARSYTRTANAGKEQRDYNKGMNAIGNKKENNNKRKNEPKKTA
ADKNQEPAKQSIAVQVKTPVSEARKTPVTPTTSPSTNTQFIPIHHPGAFPPLPSRPGFPP
PAYVIPPPVAFTMSSGYTFPPGVNVPGSFLQPSSHSAAGNQGPPGKQSHIPYSQQRPSGP
GSGNQGTLCNQSNTQAPSNSPTQPSNQTAAQLQIQVMAQQQQQQQQQQQQQSPTKPIQGL
GKNPHHHNLQYSQAADPSKQLWNNPQVSNSLGKLMPPTMKQNYFMDGRLPTEPMSMLEQC
LQHPVMQQPLEKKVKPFHMDTYNHSSAEMKISDFYWGDQSSYNLNDNRSFLAQQSVNNQR
SQRQPTGYRTGQDAVTRLPFEEPKRSPLLPPDLLKSLAALEEEEELAFSPPPDLYPALLG
PLANLPGRSLFERFPSNSVFNEVYGKPPCSSTKPDSCPPFGQQETSLYSLFEGKPWSPSL
PASSDHSTPASQSPHSSNPSSLPSSPPTHNHISQPFSNFGPIGTPDSRDRRAADRWKSDK
PAMGGFGLDYLSVAPPTENSWRQVNNSSSANAWAAQGNTREDSSAALMESLKSIWSTTMM
HPGPSALEQLLMQQKEKQQRGQGSLNPPH
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgtgtgcgcagtatctccggcaggcagaagtcctgaaagcagatatgaca
gagtctaagcctggtacagcagagacgtggacttcccgtcaagctctgcaggacttgtat
cagaagatgctggtgacagaccttgagtatgcactggacaagaaggtggaacaggacctt
tggaatcatgccttcaaaaatcagattacaacactgcaaggacaggccaaaaaccgagct
aacccaaaccgtagcgaagtgcaggccaatctttcactgttcctggaggcagctagtgga
ttttatacacagcttttgcaggaattatgcactgtgtttaatgtggatttgccatgccgt
gtcaagtcctcccagctagggatcatcagcaataagcagatgcactgtgggacggtggtg
aagcctcagtccagttcttgcgcttatatttgccagcactgcctggtacaccttggagac
attgctcgctataggaaccagacaagccaggctgaatcatattatagacatgctgctcaa
cttgtcccctccaatggtcagccgtataatcagctggccattttggcctcctcaaagggg
gatcatctgaccactattttttactactgccgcagcatcgctgttaaatttcctttccca
gcggcttccaccaacctgcagaaggcactttctaaagctttagaaagtcgtgaagaggtg
aagaaacgctggggtgtctctgattttatcaaggccttcatcaaattccatggacatgta
tatttaacaaagaatctggacaaagtgagccctttgcgagagcagctggaggagcagttc
aagaatatgctctttcagaaggcttttaatgcacagcagctggtccacatcacagtgata
aatctgtttcagctgcaccacttgcgaagtttcggcacagaggccgagcaacagagcttt
agtacagaagaggaactttgctggtctcagcttctgactctcttcatgtcgttcctgggt
atcctttgcagaagcccattaaagacccaccactgtgatgatacatcctgtgcagatcca
cttcctgctatcaaggtgtcacttgactggatgaaactgcgtcccagtgtattccaggag
gctgctgtggaggaaagacagtatgtgtggccatggctaatttctctgttaaacagtttc
catgtacttgaggaagacctagccagtgccaacatgttgccacttccagaggaatttgag
ctgcagggattcctggctcttcggcctgcattcaggaaccttgatttctctagaggtcat
caagccattattggagatcgggagacccagcatcgtcagatgcgaccagtacgtcttgtg
tcatcgggaaaatggatctgtgagaatcagccacggcttatgcagtgtcgcagcattgaa
ggcgaaattaatttctctacggatattccagaattaatgattgaagatacagttgatgca
gaggacaggtcctctccacatgacaagtatgcagaaactcaaagatctgaagggagccct
ggcttaaaatctgtactgtccactgggcgtagcctgagctgtgaatcctctgaaaagcca
gtggtgactttcaaagagaacattaaaccacaggaagtaaaccgggaattgccagcacga
agctacaccagaacagcgaatgctggcaaggaacaaagggactataacaagggcatgaat
gctataggtaacaagaaggaaaataacaataaaaggaagaatgagcccaagaagactgct
gctgacaaaaaccaggaacctgcaaagcagagcattgctgtacaggtgaaaacgccagtc
tctgaggcaagaaagacgccagtgacgccaacaactagtcctagcaccaacacccagttc
ataccgatccaccatcctggagctttccctcccttgcctagccggcctggttttcctcct
cctgcctatgtcatcccaccacccgtggcatttaccatgagttctggctatacctttcct
cctggggtcaatgttccaggatccttcttgcaaccttcatctcattcagctgctggaaac
cagggtcctcctggcaaacagtcccacattccttacagtcagcagcgtccttcaggtcca
gggtcaggaaaccagggaacactttgcaatcagtcaaatacacaggctccgtccaattct
cctactcagcccagcaatcagactgcagcacagctacagattcaagtaatggctcagcag
cagcaacagcagcagcagcagcaacagcagcagtctcccactaaacctatacaaggactg
ggcaagaacccacatcaccacaatcttcagtactcacaggcagcagacccttccaagcag
ctatggaacaatcctcaagtctccaactcactgggaaaactgatgccaccaaccatgaag
cagaattacttcatggacggccgtttgcccactgagcctatgagcatgctggagcagtgc
ctgcagcacccggtcatgcagcagcctctggagaagaaggtgaagcctttccatatggat
acatataaccacagctctgccgaaatgaagatttcagacttctactggggggaccaaagt
tcttacaatctaaatgacaaccgaagcttcctggcacagcagtctgttaataaccaaagg
agccagcgccagcctactggctatcgtacaggccaggatgcagtgactagattgccgttt
gaggaacccaagcgttcccctctcctgcccccggacctgttaaagagtctggctgctcta
gaggaggaggaagagctggctttctcccctcctcctgatctgtacccagctctgctcggc
cctctggccaatctccctggacgaagcctctttgagaggtttccgagtaacagcgtgttt
aatgaggtgtacggcaaaccaccatgcagcagcacaaagccggattcatgtccacctttt
ggacagcaggagacatctctttactccctgtttgagggtaaaccttggtctccatctctt
ccagccagctcagatcactctacaccagccagccagtcacctcactcctctaatccaagc
agcctgcccagctctcctcccacccataatcacatttcccagcccttttccaactttggg
cccattggaaccccagatagccgagatcgccgagcagctgaccggtggaagagcgacaaa
ccagcaatgggtggctttggactggactacctgtctgtggctccacccacagagaacagt
tggcgccaagtaaataattccagcagtgctaatgcctgggcagcccagggtaatacaaga
gaggactcgtcggctgccctgatggaaagcttgaagtccatctggtcaaccacaatgatg
caccctggcccatcagcccttgagcagctcctgatgcagcaaaaggaaaagcagcagaga
gggcagggatccttgaaccctccacactga
DBGET
integrated database retrieval system
