Aquarana catesbeiana (American bullfrog): 141103620
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Entry
141103620 CDS
T11018
Symbol
TNN
Name
(RefSeq) tenascin-N
KO
K06252
tenascin
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04510
Focal adhesion
acat04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141103620 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141103620 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acat00536
]
141103620 (TNN)
Glycosaminoglycan binding proteins [BR:
acat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141103620 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
Fibrinogen_C
EGF_Teneurin
fn3
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
hEGF
DUF4998
I-EGF_1
EGF
Motif
Other DBs
NCBI-GeneID:
141103620
NCBI-ProteinID:
XP_073449521
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All DBs
Position
LG07:complement(285690463..285812730)
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AA seq
1020 aa
AA seq
DB search
MELLTLWGVLIQYLLLCYPYHLLTSAAAINLPEDGECSSQQGLTITHVYSVPGEDNEQLQ
TLQSDKNNLVFRHRLQLQNPAADCEKNSLLKDLLARLQAMEADFIEMKEKYESEMAEMKS
GFDGCCGAGLSDKCNGNGKFVPALGICQCDEGWEGPDCSTRSCPGNCGENGVCIDGVCQC
AEGFTGDDCSIKKCAYDCGKFGTCVNGVCVCIEPYGGPACRKKKCLVDCSPHGKCVDGVC
QCAQGYTGVDCKERKCAVDCSPHGKCVDGVCQCAEGYTGVDCKERKCAVDCSPHGKCVDG
VCQCAEGYTGVDCKERKCAVDCRPKGRCVNGVCVCDEGFIGDDCSIEIASLCSGKGKYDL
ASGTCVCDAGWEGPDCSQKICIPPCGENGRCVNGVCVCNPGWVGLTCQEEDCLVNCGENG
RCDGGQCFCEEGFFGESCSEVLAVQNLRLISTTEDALNIAWDLMVEVDFYYITYYPFDDE
SQKRQIKVAANQDYYQIGGLNPSTLYKILMYQVKNSVTSEPAELQGRTGDVQLGTLWVTE
ETEDSLEVEWENPDVRADYFKLAYAAQPGGDKTEVQVAQSNDPKTSYIISGLLPSTTYDI
NVRAVRGAREGKASTVVGVTGIDGPKNLKATDVGEDTATLSWEAARAQIDKYILTYSGLD
GHSEEVTVGKDKTTTSLTGLTPGMEYIFHVWAEKGSKRSRRASVTAVTDIDAPTNLQASE
ITQTEATLTWTPPVAQIDGYKLVYVDEGGKRQEVELDAAAKSYELKDLHRGGDYKVYLEA
YKGDRRSRQAITSFFTVSMVITFPVDCVQTRMAGNRKSGVYTIYPGGENTQGIRAYCDQD
TDGGGWTVFQRRTTGKLDFYQRWRTYVDGFGDPSDEFWLGLEWIHKLTSTPVQYELRVDL
RNEDETAYAVYRNFRVGSSKDKYKLTISDYSGTAGDALTYHNGWKYTTWDRDNDIALTNC
ALSHRGAFWYKNCHLANPNGQYGDNRHSMGVNWEPWKGHEFSIAFIEMKMRPNNLSAKIA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggagctcttgaccctctggggtgttttgatccagtacctcctcctctgctacccctac
catctactaacttcagcagctgctatcaatctcccagaagatggagaatgcagcagtcag
caggggctcaccattacccacgtctacagtgttcctggggaagacaatgagcagctacaa
actttgcaatcagataaaaacaatcttgtgtttcgacatcgtcttcaactccagaaccca
gctgcagactgtgagaaaaactctttattaaaagatctcttggcccggctgcaggctatg
gaagcagacttcattgagatgaaggagaaatatgaatctgagatggctgagatgaagagt
ggctttgacggatgttgtggagcaggtctttcagacaaatgtaatgggaatggaaagttt
gtacctgcattgggaatctgccagtgtgatgaaggctgggaaggccctgactgttccaca
agaagctgcccaggcaactgtggagaaaatggcgtgtgtattgacggtgtctgccagtgt
gcggagggctttactggtgatgactgtagcattaaaaagtgtgcctatgactgtggcaag
tttggaacctgtgtgaacggtgtctgtgtttgcattgagccatacggaggccctgcctgc
agaaagaagaagtgtctcgttgactgcagcccccatggtaaatgcgttgatggagtgtgc
cagtgtgcacagggatacactggagtagactgcaaagaaagaaaatgtgccgttgactgc
agcccccatggtaaatgcgttgatggagtgtgtcagtgtgcagagggatacaccggagtg
gactgcaaagaaagaaaatgcgctgttgactgcagcccccatggtaaatgcgttgatgga
gtgtgtcagtgtgcagagggatacaccggagtagactgcaaagaaagaaaatgtgccgtt
gactgtcgaccaaagggccgctgcgttaatggcgtctgcgtctgtgatgaaggctttatt
ggagatgactgttctatcgaaattgctagtctttgcagtgggaaaggcaaatatgacttg
gctagcggtacatgtgtctgtgatgccggctgggaaggaccagactgttctcagaagatc
tgcatcccgccatgtggggaaaatggcagatgtgttaatggtgtctgcgtgtgcaatccg
ggttgggtaggactgacctgccaagaggaggactgcctcgtcaattgtggtgaaaacggg
cgctgtgatggtggccagtgcttctgcgaggagggattttttggagaatcttgttcagaa
gttttggctgtgcagaatttgcgtctcatcagcactacagaggacgctctgaacattgcg
tgggatctgatggtggaagtggatttctactacattacttactatccgttcgacgatgaa
agtcagaaaaggcaaattaaagttgctgcaaaccaggactattaccagatcggaggtctg
aaccccagcacgttgtacaagatacttatgtatcaggtgaaaaacagtgtgaccagcgag
cctgctgagcttcaaggcagaacaggtgatgtacaactaggaaccctgtgggtgacagaa
gagacagaggactctttggaggtggagtgggaaaatcccgatgttagagcagactacttt
aaattagcctatgccgcccaacctggtggagacaagacagaggtgcaggtagctcagagc
aatgatcccaagaccagctatatcattagcggattactgccaagcacaacctatgacatc
aatgtccgggcagtgagaggagccagggaaggaaaggcctccacagttgttggtgtgaca
ggaattgatggtcccaaaaacttaaaggcaacagatgtgggagaggacactgctacctta
tcctgggaggcagcgcgcgcacagatagacaaatatatattgacatattctggacttgat
gggcacagtgaggaggtgaccgtgggcaaggataagaccaccacttcattgaccggcctt
actccaggcatggaatacatcttccatgtatgggcagagaagggcagcaagcggagcagg
agggcatctgtaacagctgtgacagatattgatgcacctacgaacctgcaagcctctgaa
attacacagacagaagccaccttgacatggactccccctgttgctcaaattgatggttac
aaacttgtctacgtggatgagggtggcaaacgtcaggaggttgaactggatgccgcagct
aagagttatgaactgaaggacctgcatagaggaggtgactacaaggtctacctggaggcc
tacaaaggagacagaagaagcagacaggccatcacatcattttttactgtgtctatggtc
attaccttccctgtggactgtgtccaaactcgaatggcgggcaacagaaagagcggagtg
tacaccatctaccctggaggagagaacactcagggcattagagcgtactgcgatcaggat
acagatggcggtggatggactgtcttccagagaagaactactggaaaacttgacttctat
caacgctggaggacatatgtggatggctttggagatccaagtgatgagttttggcttggt
ctggaatggatccataaacttacttccacccctgtgcagtatgaactgcgtgtggacctt
cgtaatgaagatgaaacagcttatgccgtttatcgcaacttccgtgtggggtcatctaag
gacaagtacaagctaaccatcagtgactactcaggaacagctggtgatgctcttacttat
cacaatggatggaagtacacaacctgggacagggataatgatatagctctcactaactgc
gccctctcacatcgtggagccttttggtacaagaactgccaccttgccaatcccaatggg
cagtatggagataaccgtcatagcatgggtgtcaattgggagccttggaagggtcacgag
ttctccattgcattcattgagatgaagatgagacctaataacttatctgcaaaaatagca
taa
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