Aquarana catesbeiana (American bullfrog): 141105581
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Entry
141105581 CDS
T11018
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acat03009
]
141105581
Ribosome biogenesis [BR:
acat03009
]
Eukaryotic type
90S particles
Other 90S particles
141105581
Pre-60S particles
Other pre-60S particles
141105581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
RPN7
Katanin_con80
Tubulin-bind_CPAP
DUF6461
CDI
Motif
Other DBs
NCBI-GeneID:
141105581
NCBI-ProteinID:
XP_073451604
LinkDB
All DBs
Position
LG08:10984933..11065235
Genome browser
AA seq
1287 aa
AA seq
DB search
MGKSGKLRPGVAGKVKRWKKGHSSDCNPEERRHREAARSRFFSRSSGKSDLTVDAVKLHN
DLQSGSLSIQKRPEEEEEEMAVTERSGATFLSGLSDCTNITFNKVQRFWESNSAAHKEIC
AVLAAVTEVIRSQGGKETETEYFAALMTTLEAVESAESLSAVAYLLNLVLKRVPGPVLIK
KFSDTSKAFMDIMSSQATSGSTSALRWIVSCLSVLLRKQDLSAWSYPSTLQVYHGLLSFT
VHAKPKVRKAAQLGVCSILKGSEFMFTDSAPAHHPAAQSTAKFCVQEIEKSGGSKEATTT
LHMLTLLKDDLLPCFPVSVVKSCCETLLKVMTLNHVMITACAMQAFHALFSAHPNANALS
AELNAQIITALYDYLPNENDLQPLLAWLAVMEKAHINLSRLQSDLSLGHLPRLSSTSMNC
LLSPHLQVVSAATGTMKSVLTECVGPHVKDIGSVSSAPVSGPAGHLYKMFTFVEDGLSYK
FHSSWSFVLQVLQTFFEVAGKSCHPFMKKCLQTLANLRVSPHFPHTGDLDRTVGAAVESM
GPEVVLKAIPLQITGTEETFDFPRSWLVPVIRDHVKNTELGFFSRYFLPLAATVKKRAGE
LAQAGRNLEAKIYETLQWQIWTMLPGFCTKPTDVVVSFKGIARTLGMAISDRPDLRLTVC
QALRTLITKGCESESDKAEVSRFAKNFLPILFNVYSQAPAPGEGATHKLPVLDTVRVYLT
ITDQQMVSGFLDKAGVKLTDPDSADSVRLSVLDLIVAMAPYADEASMTKVYQTILPYLED
KNHSLQKKAYRVLEEICGGERPPCREFITKNLEELKKTLLGSLKSVSSPAKRPRLKCLTH
IVKLLTADHEDFITSIVPEVMICTKEVSVGARKIAYTLLADIGHAYLRLIQDPKEAMERY
LSIVYAGLTGSVTMISCSVLTLTRLLFEFKDHMGLEVIEQLLENVCLLLSSRTREIVKAA
LGFIKVVIFMMDLKILSKHLQKMMEAIGTLNEDMRRHFRMKLRNIFTKFIRKFGFDLVKS
MLPEEYHKVLVNIRKAEAKNKKQKALKEAASNADEGDDEEKGHKGDSIEEILADTDEEEE
EDVKKTKQQSKQQKKQTRQMSRAWLKEGEGDEPLNFLDANAAQRVLATKPGARSTKQSHD
FKVTSDGRLIIKDEEAEEENSQGVDEEMADLMKEVGLRTKKAQKKRSWEENDDDEAVEKT
SQYKAGGSGIHRPIHKKPNFGETYKSKKGKGDMKQKGKHDPYAYIPLNKAKLNRRKKAKM
QGQFKGLVKAAQRGAQSGRKKRKERRV
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtcggggaagctgcgccccggggtggccgggaaggtgaagcgctggaagaag
gggcacagcagcgactgcaaccccgaggagaggagacaccgggaggccgcacggagccgg
ttcttcagccggagctccgggaagagtgatctgacggtagacgctgtaaagctgcacaat
gacctgcagtcgggttccctgtccatacagaagaggccggaggaagaggaggaggaaatg
gccgtcacagaaagatccggggccaccttcctcagcggcctctccgattgcaccaacatc
accttcaacaaagtccagagattctgggagtccaactcggccgctcacaaggagatctgt
gcggttctggctgcagtaacagaagtgatccgctctcagggagggaaggagacagaaacg
gaatactttgctgctctgatgaccactctggaagctgttgagtctgcggagtcgctgtct
gccgttgcctacctgctgaacctggttctgaaaagggttccgggtcctgtgctgattaag
aaattctcggacacgtctaaggccttcatggatattatgtcctcacaggccaccagcggc
agcacctccgctcttagatggatcgtttcatgtttgtcagtgttgcttcggaaacaggac
ctgtctgcatggagttatccctccactctgcaggtgtaccatggcttactgagcttcact
gtccatgcaaagccaaaagtgcggaaggccgctcagcttggcgtgtgctctatcctgaaa
ggcagcgagttcatgtttacagactccgcccccgctcaccatcctgctgcccagtccacc
gctaagttttgtgtccaggagatcgagaaatcgggaggcagtaaagaagccaccacaacg
ctacacatgctgaccctgctgaaggatgatctgctgccgtgtttccctgtcagtgtggtc
aagtcttgctgtgagacgttactgaaggtcatgaccttgaaccatgtgatgatcacggct
tgtgccatgcaggcattccatgccctcttcagcgctcaccctaatgccaatgctctgtct
gccgagctcaatgcccagatcatcacagccctgtatgactatctgcccaatgaaaacgac
ctgcagcctttactggcctggctggcggtaatggagaaagctcacatcaacttatcacgg
ttgcagagtgacctgagtttgggtcatctacctcgcctctcctccacctccatgaactgc
ctcttgtctcctcatctgcaggttgtgtctgcagctaccggaaccatgaagtccgttctt
acagagtgtgtcggccctcatgtaaaagatattggaagtgtctcttctgctccagtatca
ggaccggctggacacctctataaaatgttcacatttgtagaagacggtttatcctacaaa
ttccactcctcctggtcctttgtcctgcaagttctgcagaccttctttgaggttgccggg
aagtcctgtcacccgttcatgaagaagtgtctacagaccctggccaacctccgggtctct
cctcacttcccacacaccggagacctggaccgaaccgtgggggcggctgtggagagcatg
ggaccagaggtggtcctgaaggccatccctctacagatcactggcacagaagagacgttc
gactttccccgcagctggctggtgcctgtgatccgcgatcatgtgaagaacacagagctg
ggattcttcagcagatacttcctaccgctggccgctactgtgaagaagagagctggtgaa
ctggctcaagcaggaagaaacctcgaggccaaaatctatgagactctccagtggcagatc
tggacgatgttacccggattctgcaccaagcccacagacgtggtcgtttccttcaaagga
attgctcgcactttgggaatggcaatcagtgatcggccggaccttcgacttactgtgtgc
caggctttgcgtacgctcatcactaagggatgcgaatcagagtctgataaagctgaagtc
agcaggtttgccaagaactttctccctatactgttcaatgtgtacagccaagcgcctgca
ccaggagagggcgccactcacaagcttcctgtgctggatacagtgcgagtttatctaaca
atcacagaccagcagatggtcagcggcttcctggataaggccggtgtgaagctgaccgat
cctgacagtgccgattccgtgagactttctgtgttggatctcatcgtagccatggctccc
tacgctgatgaagcctccatgaccaaggtctaccagactattcttccctatctggaggat
aaaaatcacagcttgcagaaaaaggcgtaccgtgtgctggaggagatctgcggaggggag
aggcctccatgccgagagtttattactaagaacttggaggagctaaagaaaactctgctg
ggttccctgaaaagcgtttcctctccggccaaacggcctcgtttgaagtgtctcacccat
attgtcaagctccttaccgctgaccatgaagacttcataacgtctattgttccagaggtg
atgatttgcactaaagaagtgtcggtgggagcgcggaagatcgcgtatacgctgttggcg
gatataggacacgcctacctgcgcttaattcaagacccaaaagaggccatggagcgctac
ctaagtattgtctatgccgggctcaccggttctgtcaccatgatcagctgttcagtcctc
accctgacccgactcctgtttgaatttaaagaccacatgggattggaggtgatcgagcag
cttctggagaacgtttgtctcttgttgagctccagaacgagggagattgtgaaggccgcc
ctgggatttattaaagtcgtcatatttatgatggatctgaaaattctctccaaacaccta
cagaaaatgatggaagcgatcggaaccctaaacgaggacatgaggcgccacttccgtatg
aagctgagaaacatcttcaccaaatttatccggaaattcggatttgatctggtgaagagc
atgttaccggaggaataccacaaggtgctagtcaatatccgcaaagcagaggctaaaaac
aagaagcaaaaggccctgaaagaagccgcctccaatgcagacgaaggtgatgatgaggag
aaagggcacaagggagacagcattgaggagattttagcggacacagacgaggaggaagag
gaggatgtgaagaagacgaagcagcagagcaaacagcagaagaagcaaacgcgacagatg
agcagagcctggctgaaggaaggggagggagatgaacctctgaacttcctcgatgccaac
gccgcgcagagagtattggccacaaaaccgggtgcgaggagcacgaagcagagccatgac
ttcaaagtcacatcggacgggcggctcatcatcaaggacgaggaagcggaagaagagaac
tcacaaggtgtggatgaggagatggcggatctcatgaaagaagtcggacttcgcactaag
aaggcacagaagaagcgttcctgggaggagaatgacgacgatgaggccgtagagaaaacg
tcacaatataaagctggcggctcaggaatacaccgacctattcacaaaaagccaaacttt
ggagagacgtacaaatcaaagaaaggaaaaggtgatatgaagcagaaaggcaaacatgac
ccgtacgcctacatccccctcaacaaagccaagctcaaccgcaggaaaaaggcaaagatg
caaggccagtttaaaggactggtgaaagcggcacagagaggagcgcagagtggaaggaag
aagaggaaagagagaagagtttga
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