Aquarana catesbeiana (American bullfrog): 141105913
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Entry
141105913 CDS
T11018
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
141105913 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acat03021
]
141105913 (TAF5)
03036 Chromosome and associated proteins [BR:
acat03036
]
141105913 (TAF5)
Transcription machinery [BR:
acat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
141105913 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
141105913 (TAF5)
Chromosome and associated proteins [BR:
acat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
141105913 (TAF5)
STAGA complex
141105913 (TAF5)
TFTC complex
141105913 (TAF5)
SAGA complex
141105913 (TAF5)
SLIK complex
141105913 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_Nup120_160
WD_LRWD1
WD40_like
VPS8_N
CDK5RAP3
eIF2A
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
141105913
NCBI-ProteinID:
XP_073452223
LinkDB
All DBs
Position
LG08:complement(90127796..90164170)
Genome browser
AA seq
761 aa
AA seq
DB search
MAAVPDEASTSVKTEPELLEEVKSESLSVPVTEEPALGNGHGTSPKAASSPLPPPLTTPE
PPDRQTLLAVLQFLKKSNLRESADILRRECGLEPEESPALSPSGQPTSGEPESAEHSLLS
RVTAGSAAISSTAAGGAPTTVQSAGKGALNSGPQDQPDVSAVLSAYTQQGDPALYEDYYS
GLKRFIESVLDCHRAELSQLFYPLFVHMYLELVYNQHENKAKSFFEKFHGDQECYYEDDL
RILASLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWSIVQEHLYI
DIFDGMPRSKQQIDAMVGSLSGEAKREANKVKVFFGLLKEPEIEVPLDDEDEEGENEEGK
PKKKKPKKDSIGSKSKKQDPHAPPQNRIPLPELKDSDKLDKIMIMKEAAKRVRLGPDSLP
SICFYSFLNAYQGLTAVDVTDDSSMIAGGFADSTVRVWSLTPKRLRGVKSTADLSLIDKE
SDDVLERIMDEKTSSEIKVLYGHCGPVYATSFSPDRNYLLSSSEDGTVRLWSLQTFTCLV
AYKGHNYPVWDAQFSPYGYYFVSGGHDRIARLWATDHYQPLRIFAGHLADVISTRFHPNS
NYVATGSTDRTVRLWDVLNGNCVRIFTGHKGPIHSLTFTPNGKFLASGGTDGRVLLWDIG
HGLMVGDLKGHTNTIYALKFSRDGEILASGSMDNTICLWDAIKAFEDLETDDFTTSAGHI
NFNENSQELLLGSYMTKSTPVIHLHFTRRNLLLAAGAFSPQ
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgccagacgaggcgagtacctcggtgaagacggagcccgagctcctggag
gaggtgaagagcgagagcctgtcggtgccagttaccgaggagccagcgttgggaaacggc
catggcacctccccgaaggccgccagctcaccgctgcctcctccgctcaccaccccggag
cctccggaccggcagacactgctggccgtcctgcaattcctcaagaagagtaatctgcgg
gagtccgccgacatcctccgccgggagtgcggcctggagcccgaggagagtccggctctc
agcccaagcggacagccgacctccggggaacccgagagcgccgaacacagtctgctgagc
agagtcaccgcggggagcgccgccatctcctccaccgccgccgggggagctccgaccacc
gtacagtccgccgggaaaggtgctttgaatagtggcccacaggaccagccagatgtcagt
gctgttctgtctgcttatacccagcaaggagatccagctctgtatgaggactattacagc
ggcctaaaacgattcattgagtctgtactggactgtcatcgtgcagagttatctcagtta
ttctaccctctctttgtgcacatgtacctggagctggtctacaatcagcatgaaaacaaa
gccaaatctttctttgaaaaattccatggggaccaggaatgttactatgaagatgatctc
cgcattttagccagccttaccaagaaagagcacatgaaaggcaatgagaccatgttagac
tttcgaacaagcaagtttgtgctaagaatatcccgggactcctatcagctgcttaagcgc
catctacaggagaggcagaacaatcagatatggagcatagtacaggaacacttgtacatt
gatatatttgatggcatgccacgtagcaaacaacagatagatgctatggtgggtagcttg
tctggggaagccaagcgtgaagcaaacaaagtcaaggtgttctttggccttctgaaagaa
ccagagattgaagtccctttagatgatgaagatgaagaaggggaaaatgaagaaggaaag
ccaaagaaaaagaagccaaaaaaggacagcataggctcaaaaagcaagaaacaggaccca
catgcaccgcctcagaataggattcctcttccagagctaaaggattctgacaaacttgat
aaaattatgattatgaaggaagctgccaaacgggttcgccttggtcctgattcactgccc
tcaatctgtttctactcattccttaatgcttaccagggtttgactgcagtggatgttacg
gatgattccagcatgatcgcaggagggtttgcagattctaccgtgcgtgtgtggagtcta
acgccgaaaagacttagaggtgtcaaaagcacagctgatctcagcttgatagataaagaa
tcggatgacgttctggaaagaattatggatgaaaagacatcaagcgagataaaagtttta
tatggtcactgcggacctgtctatgcaactagcttcagtccagacaggaattatttatta
tcaagttcagaagatggcactgtccgtttatggagtcttcagacattcacctgcttagtg
gcatacaaaggacataactatccagtgtgggatgctcagttttctccatatggatattac
tttgtgtctggaggccatgacagaattgctcgtttatgggcaacagaccattatcagcct
ttacgtatatttgctggccatcttgcagatgttataagtactcgttttcatcctaattct
aattacgtagctactggctcaacagacagaacagtcagattatgggatgtattaaatggg
aactgtgtgaggattttcactggacacaagggaccaattcattcattgacttttactcca
aatggaaaatttctggctagtgggggcacagacggcagagtcttgctttgggatattggc
cacggtttgatggttggagacttaaaaggtcacactaacacaatctatgcactaaagttt
agccgagatggagagattttagcatcaggatctatggataatactatctgtttatgggat
gcaataaaagcatttgaagatctagaaactgatgactttacaacttctgcaggacatata
aacttcaatgaaaattctcaagagcttctcctaggctcctatatgacaaaatctactcct
gttattcatcttcattttacacgccgaaatcttcttctggctgctggagcttttagccca
caatga
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