Aquarana catesbeiana (American bullfrog): 141106077
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Entry
141106077 CDS
T11018
Name
(RefSeq) nucleolar RNA helicase 2-B-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acat03009
]
141106077
03036 Chromosome and associated proteins [BR:
acat03036
]
141106077
Enzymes [BR:
acat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141106077
Ribosome biogenesis [BR:
acat03009
]
Eukaryotic type
Pre-60S particles
Helicases
141106077
Chromosome and associated proteins [BR:
acat03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
141106077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
141106077
NCBI-ProteinID:
XP_073452574
LinkDB
All DBs
Position
LG08:complement(140345218..140395897)
Genome browser
AA seq
760 aa
AA seq
DB search
MPGIILNEEMESGVGKNKKCSKTPTPKKIKRKIQNGDTEELDFEQATELNGLVNEDLNNN
DQKTPKLKKKKKKLAENESSFEAAEQCSEELDNSDAPTPKKVKKKKQKKDLEEPETQQEA
AEPETNGEQSGKKTKKKKSSKKVKENVDSEDSGVPVAKKRKIEPEINGLNEEPQTEEEEI
NLEKIEGDFSKFPISQETIANLQAKGVAYLFPIQTKTFHTAYSGKDVVVQARTGTGKTFS
FAIPLIEKLIQDKAPLAQGRPPRVLILTPTRELAIQIMNEIRSISKKLKTCCFYGGSPYQ
QQVFAIRTGLDILVGTPGRIRDLVQNYKLNLTALKHVVLDEVDMMLEMGFAEQVEEILSV
RYTSDPEQNPQTLLFSATCPDWMYNVAKKYMQKDFSKIDLVGHRSQRAAITVEHLAIECN
RFQKPAVLGDIIQVYSGSHGKTIVFCDSKLEAHELSTNCSLKQSAKALHGDLQQKEREVI
LKGFRNGSFEILIATNVAARGLDIPEVDLVVLYSAPREADAYVHRSGRTGRAGRTGICIS
LYEPRDRHCLPMVERSTGIKFKRVGIPSILNVAESSSADAIKSLESIPADVIEHFKVYAE
ELIEKKGALNALAAALAHISGASSLKQRSLLNMETGYITVVLKTSVPIHTLSYVWRAIKE
QMGEEIDSQIYRMCLLKDAMGVCFDVKEDTLKTFQDSWKDSRRWQFSVATELPALQESRR
DQEGSRGRGGRSFDRRNNRNSSHRGGNRGRGRRGGFGRRN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggataattctaaacgaagaaatggagagcggagtcggcaagaataagaaatgc
tctaaaactcccacacccaagaagatcaagaggaaaatccaaaatggggacacagaagaa
cttgattttgagcaagcaaccgaactgaacggcttggtgaacgaagatttaaataacaat
gatcagaagacaccgaaactgaagaagaaaaagaagaagcttgcggaaaatgagagttct
tttgaagcagctgagcagtgtagtgaggagctggacaactcggacgctccaacaccaaag
aaagtaaaaaagaaaaaacaaaaaaaggatctggaagagcctgaaacacagcaagaagca
gctgaacctgagaccaatggagaacaaagtggcaaaaaaacaaaaaaaaagaaaagttca
aagaaagtaaaggaaaatgttgacagtgaagacagtggcgttcctgtagctaagaaaaga
aagattgagcctgaaataaatgggctgaatgaggaacctcaaacagaggaagaggaaatt
aacttggagaaaattgagggtgacttttctaaatttccaatttcccaagaaactattgca
aacttacaagccaaaggagtcgcttacctgttccccatacaaacgaaaaccttccacact
gcctacagtgggaaagatgttgttgttcaggctcgtactggcactggaaaaaccttctca
tttgccattcctttaattgagaagctaatccaagataaagcgccactggcacaaggacgc
ccaccaagggtgctgatcctaactcctactagagagctggcaattcagattatgaatgaa
attcgcagcatatctaaaaagctaaagacctgttgcttctatggtggaagtccctatcag
cagcaagtatttgctataagaactggacttgacatacttgttgggacacctggtcgtata
cgggaccttgtccagaattataaattgaacctcactgcactgaaacatgtggtgctagac
gaggtggatatgatgttagaaatggggtttgctgaacaggtggaagaaattttatctgtc
cgttatacatctgatcctgaacagaatccacaaactcttctattctctgcaacatgtcca
gactggatgtacaacgttgccaaaaaatacatgcaaaaggacttctcaaagatcgacctt
gttggacaccgtagtcagagggctgccatcactgttgagcatttggccattgagtgtaac
agattccagaagccagctgtccttggtgacattatccaagtttatagtggaagtcatggg
aaaacaattgttttttgtgactccaaactagaagctcatgaattgtcgaccaactgctca
ttgaaacagtctgccaaagctctacatggtgaccttcaacaaaaggagcgtgaagtcatc
ttgaaaggctttagaaatggatcatttgaaattcttattgcaacaaatgttgctgctcga
ggtctagatatcccagaagttgatctagttgtgttatattctgcaccaagggaagcggat
gcatacgtccatcgttcaggacgtacgggtagagctgggcgcacaggaatttgtatttct
ctttatgaacccagagacagacattgccttccaatggtggagaggagtacgggtattaag
ttcaagcgggttggtatcccatccatacttaatgttgctgagtcctccagtgctgatgca
ataaagtcactggaatctatcccagctgatgtcattgaacattttaaagtatatgcagaa
gaacttattgaaaagaagggagcattaaatgctcttgcagcagctttagcacatatttct
ggagcttcatccttgaaacaacgatcgcttcttaatatggaaactggctatatcaccgtt
gtattgaagacttcagttcccatccataccttgagctatgtttggcgtgcaattaaagaa
caaatgggagaagaaattgattcccaaatttaccggatgtgcctcctaaaagatgccatg
ggcgtttgttttgatgttaaggaagacactttaaagacttttcaagattcctggaaagat
tcaaggcgttggcagttttctgtggcaactgagctcccagcgcttcaagaatcaaggaga
gaccaagaaggttcacgtggtagaggaggcagatcatttgacagacgcaacaacagaaat
tcatcacacagaggcggaaatagaggaagaggcagacgaggaggttttggaaggaggaat
tag
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