Aquarana catesbeiana (American bullfrog): 141106082
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Entry
141106082 CDS
T11018
Symbol
PDLIM1
Name
(RefSeq) PDZ and LIM domain protein 1 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141106082 (PDLIM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
acat04990
]
141106082 (PDLIM1)
Domain-containing proteins not elsewhere classified [BR:
acat04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
141106082 (PDLIM1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
141106082
NCBI-ProteinID:
XP_073452585
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All DBs
Position
LG08:complement(141055894..141130433)
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AA seq
406 aa
AA seq
DB search
MTTKRVVLTGPAPWGFRLVGGKDFDQPLTISRVTLGSKAALAELCTGDVVVAIDGENTDG
MTHLEAQNKIKACEDDLALTINRVESKIWSPLVTEEGKSNPYKMNLSSAPQRPVKFQRAF
SMTYQPLKSPSGSISPVSPSVMFKAPMASVYNPLQSCTAPGSLQRRHSTSSIPTQVRVGP
EELKQAAQICPNSPVEVDIPGLKVMHNQFNSPLQLYSQENILDTLQGQISSINPTYSSVE
RPPPPPQARQIDTDSEVYKMLQENQESNEPPRQSVSFLVLQDILESDEKDFQGTEYSFPG
SADGLDPGEKPSGFRSVRAPTTRVAASVGGGQKLPICDHCGSGIVGAFVKIRDKPRHPEC
YVCTDCGTNLKQKGHFFVEEKMYCEKHARERMTPPEGYDVVTVFPK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaaacgtgtcgtcctcaccggacccgcaccatggggcttccgactggtcggg
ggaaaagacttcgatcaaccgctaaccatttccagggtgacactcggtagcaaggctgct
ttggctgaactgtgtactggagatgtggttgttgccattgatggagagaacaccgatgga
atgactcatttagaagcccagaacaaaatcaaggcctgtgaagatgatctggctctcacc
attaacagggttgaatctaagatttggtcaccccttgtaactgaagaaggcaaatcaaac
ccatataaaatgaacctatcatcggctcctcagagacctgtcaaatttcaacgtgctttc
agcatgacttaccaaccactaaaatcaccatcaggctccatcagtcctgtctctccctct
gtgatgtttaaggctcccatggcttctgtgtataaccctcttcagtcttgtaccgcccct
ggctccttgcaaaggcggcacagcacctcttcaatcccaactcaagtgcgagtgggccct
gaagagttgaaacaagctgcacagatctgtcctaacagcccagtggaggtggatattcct
ggactaaaagtcatgcacaaccagtttaactccccattacagctctattcccaagaaaac
attctggacactttacagggccagatctcttctattaacccaacttattccagtgtagaa
cggcctcctcctccgccacaagcacggcaaattgacacggactccgaggtatacaagatg
ctgcaggagaaccaggaatcgaatgaacccccaagacagtccgtctccttcctagtactg
caggacatattggagagcgatgagaaagactttcaaggcacggaatattcattcccaggt
tcagctgatggtttagacccaggtgagaagccttctgggttccgcagtgtgagagccccc
accacaagagtagcagcctctgttggcggtgggcaaaaattgccaatctgtgatcattgt
ggatcaggcattgtgggagccttcgtaaagatccgtgacaagcctcgtcaccctgaatgc
tatgtgtgcactgactgtggaacaaatctcaaacagaaggggcacttttttgtagaagaa
aagatgtactgtgaaaagcatgcacgggagcgtatgacaccccctgaaggctacgacgta
gtgacagtattcccaaagtaa
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