Aquarana catesbeiana (American bullfrog): 141106141
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Entry
141106141 CDS
T11018
Symbol
NFKB2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04010
MAPK signaling pathway
acat04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141106141 (NFKB2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
141106141 (NFKB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acat03000
]
141106141 (NFKB2)
Transcription factors [BR:
acat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
141106141 (NFKB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
141106141
NCBI-ProteinID:
XP_073452713
LinkDB
All DBs
Position
LG08:complement(158641156..158717784)
Genome browser
AA seq
941 aa
AA seq
DB search
MNNGLKVEPFDHYFCNGDPDGGFDYTPYTESQDPEQEIPTGPHLAIIEQPKQRGFRFRYV
CEGPSHGGLPGASSEKGKKTYPTVKIFNYVGMAKIEVDLVTHTDPPRVHAHSLVGKHANE
TGSCVVTVGPKDMTAQFNNLGIVHVTKKSQIEILKEKIRQQIMRTRCLTEQDEKDIETEV
KDLKKVTDLSIVRLRFTAYLPDSTGAYTLRLKPVISDPIHDSKSPGASNLRISRMDKTAG
SVKGGDEVYLLCDKVQKDDIEVRFYEDDENGWEAFGDFSPTDVHKQYAIVFRTPPYHKQK
IDRPVTVFLQLKRKRGGDVSDSKQFTYYPLDQDKEEVERKRRKDIPSLNHSFGGGAPMGG
AGGGGGGSGGFGHAGGNNMNYPYGSLHSGFFTHTGTVYQGGYAIKADSSETSHLPVNIKK
EADKTPCSLTQENVPSIQREYQETIRQAHMCSMRMLSLAQRTSKALMDYAVSADPRMLLA
VQRPLTATRDENGDTPLHLALIHGQKAVIQQLVDVIRGVPDQKILNICNNLHQTPLHLAV
ITKQYQMVALLIRAGADPTILDRFGNSVLHLAVQAGDDKMLQVLLDHQFSGYKNLLNMPD
YHGLYPVHWAVKVKNEKCLERLVKSGADINAAERKSGRCPLHIAVEMNNLNMAVTLTKKL
GANVNAQTFGGNTPLHLAACMGSPVLTKMLVNAGANVLMENDEPVDSASCSDSDETDSDS
DVDMDTDSDQQGDSDSEDNESLDTNQGNERIHYGAKRRYPGHTPLDLTKSQKVRDILSKL
PPGDAALKPHGQATVNVLSLETNTVQRLEKLLNEGQTGSDWTELASRLRLQSLVDTYKNT
PSPTENLLRSYELAGGSLGGLIKTLESMGVNEGVQLLCSSETYVKQADQAKGIMVDSAYG
SESVDMEKSAESEPQKPALLETTRLSPTQELSPGNDPPSGH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacggacttaaagtggaaccattcgatcactatttttgcaatggagatccagat
ggtggttttgattatactccatatacagagtctcaggatcctgagcaagaaataccaact
ggtccacacctggcaatcatagagcagcctaaacagcgcggctttcggtttcgctatgta
tgcgaaggaccatctcatggtggactacctggggcatccagtgagaaagggaagaaaacc
tatccaacagttaaaatctttaattatgttggcatggccaagattgaagtggatttggtt
acgcacacagacccaccacgtgttcacgctcacagccttgttggaaaacatgccaatgag
acaggaagttgtgtggtgactgtagggcctaaagatatgactgctcagtttaataactta
gggattgtccatgtcacaaaaaagagtcagattgaaatcctgaaggaaaagataagacag
caaataatgagaacccgttgtctcacagagcaagatgagaaagatatagagacagaagta
aaagatctgaagaaagttacagacctgagcattgtccggcttcgatttacagcatatttg
ccagacagcactggtgcttatactctccgtttgaagccagtcatttctgatcccatccat
gacagcaaatctcctggagcctctaacctgcgtatttctcgaatggacaagactgcaggg
tctgtaaaaggaggagatgaggtgtacttactttgtgataaagtgcagaaagatgatata
gaagtgcgattttatgaagatgatgaaaatggatgggaggcatttggggacttctcacca
acagatgtccataagcagtatgccattgtattccggacccctccataccacaagcagaaa
attgaccgcccagtgaccgtgttcttgcagttaaagcgaaaacgtggcggagatgtcagt
gactccaagcagtttacctactaccctttggatcaagacaaagaagaagtggagagaaaa
aggagaaaagatattccatcgttaaaccacagctttggtggaggagcacccatggggggt
gcaggaggaggaggcggaggctctggaggttttgggcatgcaggagggaataatatgaat
tacccctatggaagcctacatagcggtttctttacacacactggtacggtctaccagggt
ggatacgcgataaaagccgactcctctgagacttcacacctgccagtaaacattaagaag
gaggcagacaagaccccatgcagcctcacacaggaaaatgttccatctatccagagagaa
taccaagagaccatacgtcaagctcatatgtgcagtatgagaatgctgtccctagcccag
cgtacctccaaggccttaatggattatgcagtaagtgcagaccctcgcatgctgctggct
gtgcagagaccgctgactgccactcgggatgagaacggagacacgcccctccaccttgca
cttatacacggacagaaggcagtcattcaacagctggtagatgttataaggggggttcca
gatcagaaaatcctcaacatatgcaacaaccttcatcagactcctttgcaccttgcagtg
atcaccaaacaatatcaaatggttgctttgctgatcagagctggagcagaccctactatc
cttgatcgttttggaaactctgtgctacatttagctgttcaagcaggagatgataaaatg
cttcaggttctcttagatcaccaattcagtggttacaaaaatctcctcaacatgccagat
tatcatggtttgtacccagttcactgggcagtaaaggtgaaaaatgaaaaatgtttggag
cggctggtgaaaagcggagctgacatcaatgctgcagagcgtaagagtgggagatgccca
cttcacattgctgtggaaatgaacaacctaaatatggctgttactctaaccaaaaagctg
ggggcaaatgtaaatgctcaaacgtttggaggaaatacaccactgcatctggctgcttgt
atgggttctccagtgctgacaaagatgctggttaatgcaggtgcaaatgtcctaatggaa
aatgatgagcctgtggatagcgcatcatgcagtgacagtgatgaaacagacagtgattct
gatgtggatatggatacagactctgaccagcaaggagacagtgattcagaagacaatgaa
tccttagatacaaatcaggggaatgaaagaatacactacggagctaagcggcgttatcct
ggacacactccactggatctaaccaaaagtcagaaggtgcgagacatattatctaaactc
ccacctggtgatgcagctttgaagccacatggacaagcaacagtgaatgtgctttctctg
gaaaccaatactgtacagcgccttgagaaactactgaacgagggccagacaggatcagac
tggacggaacttgcttcacggctgagacttcagagcttggttgacacttacaaaaacaca
ccatcccctacagagaacctcctacgtagttatgagcttgctggtggaagtctcggtggg
ctgattaaaacactagagtctatgggagtgaatgaaggcgtgcaacttctatgcagctca
gagacgtatgtgaagcaggcagatcaagccaaagggatcatggttgacagtgcctatgga
agtgagtctgtggatatggaaaagtctgcagaatctgaacctcagaagcctgcccttctt
gagaccaccaggttgtccccaacgcaagaattatctccaggaaatgatccaccaagcggc
cactaa
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