Aquarana catesbeiana (American bullfrog): 141106227
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Entry
141106227 CDS
T11018
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03020
RNA polymerase
acat04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
141106227 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
141106227 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acat03021
]
141106227 (POLR3A)
Enzymes [BR:
acat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
141106227 (POLR3A)
Transcription machinery [BR:
acat03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
141106227 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
141106227
NCBI-ProteinID:
XP_073452933
LinkDB
All DBs
Position
LG08:203792741..203935812
Genome browser
AA seq
1402 aa
AA seq
DB search
MKSEVTLGAGDNMKEQFRETDVAKKISHICFGVKSAEQMRQQAHIQVVSKSLYSQDNSRT
PLSYGVLDHRMGTSEKDRPCQTCGKNLADCLGHYGYLDLELPCFHVGYFKAVIGILQMIC
KTCSHIMLTSEERKQFLDYLKKPGLTYLQKRGLKKKISEKCRKKTICLYCGAFNGPVKKC
GLLKIIHEKYKTTKKVIDPLVSQFLQSFDTAIEHNKEVEALLARAQENLNPLVVLHVLRR
IPDEDVPLLLMNPEAGKPCDLILTRLLVPPLCIRPSVISDLKSGTNEDDLTMKLTEIIFL
NDVIKKHRISGAKTQMIIEDWDFLQLQCALYINSELSGIPMNMAPKKWTRGFVQRLKGKQ
GRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNSANVHFMRKLVQ
NGPDVHPGANFIQQRHTQMKRFLKYGNREKIAQELRYGDIVERHLIDGDIVLFNRQPSLH
KLSIMAHIARVKPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEAYVLMGTKANL
VTPRNGEPLIAAIQDFLTAAYLLTLKDTFFDRAKACQIIASILVGKDEKIKARLPHPSIL
KPVVLWTGKQIFSIILQPSADNPVRANLRTKGKQYCGKGEDLCHNDSYVTIQNSELMCGS
MDKGTLGSGSKNNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGL
LKAKQDLLDAGYKKCDEYIEALNTGKLQQQPGCSAEETLEALILRELSVIRDHAGSACLR
ELDKSNSPLIMALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPS
AKGFVANSFYSGLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLT
VRSSTGDIIQFIYGGDGLDPAAMEGKDEPLEFKRVLDNVKAVFPCSSEPALSTNELLLTT
ESILKKAEFQSCQDSYLQEIKKFVNGVSEKIRKTRDKYGINDNGSTEPRVLYQLDRITPT
QLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPR
IKEIINASKNISTPIITAHLDVDDDSDFARLVKGRIEKTLLGEISEYMEEVFLPDDCFLL
VKLSLERIRLLRLEVNAETVRYSICLSKLRVKPGDIAVHGEAVLCVTPRENNKSSMYYVL
QSLKEELPKVVVQGIPEVARAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGSHTTSN
NTYEVEKTIGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLA
KMKESVLMLASFEKTADHLFDAAYFGQRDSVCGVSECIIMGIPMNIGTGLFKLLHKADKD
PDPPKRPLIFDNTDFHLPITST
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgaggtgacgcttggagccggggacaacatgaaggaacaattcagggaaacc
gatgtggcgaaaaagataagccacatttgttttggcgtaaagtctgcagagcagatgaga
cagcaggcacacattcaggtggtaagcaagagcctgtacagccaagacaacagccgcaca
cctttgtcttatggagtactggatcatcgcatgggtacaagtgagaaggaccgaccttgc
cagacttgtgggaaaaacttggcagattgtttgggtcactatggttacttagatttggag
ttaccttgcttccatgtaggatactttaaagcagtcattggaattttacagatgatctgt
aaaacttgctcccacataatgcttacttcagaagagagaaaacagtttttggactaccta
aagaagccaggcctcacttacctgcagaagaggggcttaaagaagaaaatttcagaaaaa
tgtcgcaagaagacaatttgtctctattgtggtgcctttaatgggccagtaaagaagtgt
ggcttacttaaaattatccacgaaaaatacaagaccaccaaaaaagtaatagaccctctg
gtgtcccagttcctacagtcctttgatacagcaatagagcacaacaaggaagtagaagca
ttgctggcgcgtgcacaggaaaatctaaacccacttgtggtgcttcatgttctgagacgt
atcccagatgaagatgttcctctgttactaatgaaccctgaagctggtaaaccatgtgac
cttattctcacaaggcttctggttcccccactctgcattcgtccctctgttatcagtgat
ctgaaatctggaactaatgaagatgatctcacaatgaagttgacagaaatcatattctta
aatgatgtcatcaagaagcacagaatctcaggagcgaaaacccagatgattattgaagac
tgggatttcctacagcttcagtgtgctttatacatcaatagtgaactctctggaattccc
atgaatatggctcccaaaaaatggacacgtggttttgttcaaaggctaaagggaaaacaa
ggtcgatttagaggaaacctttctggcaaaagagtggatttctctggtcgtactgtcatt
tctccagacccaaatctgcgtatagatgaggtagcggttcctgttcatgtggcaaagatt
ttgacatttcctgaaaaggttaacagcgcaaatgtccattttatgcggaaacttgtccag
aatggaccagatgttcacccaggagccaactttattcaacagagacatacccaaatgaaa
agatttctgaaatatggtaaccgagagaagatagctcaggagttacggtatggagacatc
gtggagaggcacctcatagatggagatattgttctgtttaatcgacaaccatccctgcac
aagctcagcatcatggctcatatagccagggtgaaaccgcacagaactttccgtttcaat
gaatgtgtctgcacaccctacaatgctgattttgatggtgatgaaatgaatctacatctt
cctcagactgaagaagccaaggcagaggcttatgtgttgatggggactaaagccaatctt
gtgacaccacgtaatggggagccactgattgctgcaattcaggactttcttacagctgcc
tatctccttacgcttaaagacactttttttgaccgtgccaaagcatgtcagatcattgcg
tctattctggtgggaaaagatgagaaaattaaagctcgccttccacatccatctattctg
aagcctgtcgttttgtggactggaaagcagatcttcagcattattttgcaaccgagtgcg
gacaatccagtccgtgccaacctaaggaccaagggcaagcagtactgtggtaaaggggaa
gatctgtgccacaatgattcttatgttacaattcagaacagcgagctaatgtgtggaagc
atggacaaaggaactctgggttctggctcaaagaataatattttctacatacttctgcga
gattggggacagcttgaggctgccaatgctatgtcacgtcttgcaagattggcacccgtt
tatctctcaaatcgaggcttctctatcggaattggagatgtcactccgggtcaaggtctg
ttaaaagctaaacaggatcttttagatgccggctacaagaagtgtgatgaatacattgag
gctctaaacactggcaaactccagcagcagcctggctgcagtgcagaggaaactctagag
gctttgattttacgtgagctgtcggtaatcagagaccatgcgggaagtgcctgtttgaga
gaactggataagagcaacagtccacttatcatggccttgtgtggatccaaagggtcattt
ataaatatctctcagatgattgcatgcgtgggccagcaggctatcagtggctcgcgtgtc
cctgatggctttgagaaccgatccctgccacattttgagaagcattcaaagcttccatca
gctaaggggtttgtggcaaacagcttctattcaggactgacacctacagaatttttcttc
cataccatggctggacgagagggtttggtggacacagctgtcaagacagcagagactggt
tatatgcagagacgactagtaaaatcccttgaagacttgtgctctcagtatgacctgact
gtccggagctccactggtgatattatccagttcatatatgggggtgatggactggaccct
gctgccatggaaggaaaagatgaacctcttgagtttaagagagtcttagacaatgtcaag
gctgtttttccctgttcaagcgaaccagcactaagtacaaatgagctgcttctgactaca
gagtccatcttgaagaaggcagagtttcagtcttgccaggattcttatttgcaggaaata
aagaagtttgtgaatggggtatcagaaaagataaggaagaccagagataaatatggcatt
aatgacaatggctccacagagccacgggtattgtaccagttggacaggatcacgcctaca
cagctagaaaagtttttggagacttgtcgggataaatatatgagagcacagatggaacca
ggttcggccgtgggagctctctgtgctcagagcattggagagccaggaacacagatgacc
ctgaaaacatttcactttgctggtgttgcttccatgaacattacattgggtgtgccccgt
atcaaggagatcatcaatgcctcaaagaacattagcacaccaatcattaccgctcatcta
gatgtagatgatgactctgactttgctcgtctggtaaaaggtagaattgagaagacctta
ttaggagagatatcagagtacatggaggaggtgtttcttcctgatgactgtttcctcctg
gtgaagctttcactggaacgtatccgcttgttgaggcttgaggtaaatgctgagactgta
agatactccatctgcttgtctaagctccgtgtaaagcctggagatattgcagttcatggg
gaggctgtgttgtgtgtcacaccaagagagaataataagagttctatgtactatgtcctg
cagtcactgaaagaggaattgccaaaggtggtggtacaaggcattcctgaagtggcacgt
gctgtcatacatattgatgaacagagtggaaaagaaaagtacaaacttttggttgagggt
gataatctccgtgctgtcatggctacccatggggttaagggctcacataccacttcaaac
aacacctatgaggtggaaaagactattggtatagaagctgcacgctccaccattataaat
gagatccagtataccatggtaaatcatgggatgagtattgacagacgtcacgtcatgctt
ctgtctgatctgatgacttacaagggagaagtgctcggtatcactcgctttggcctggct
aagatgaaggaaagtgttttgatgctggcttcttttgagaaaacggctgatcatttgttt
gatgcagcctattttggacagagagattctgtttgtggagtctccgagtgcataattatg
ggcatacccatgaacattggaactggactttttaagcttctgcataaagctgacaaggac
cctgatccacctaagagacccttgatctttgacaacactgattttcacctccctatcact
agcacgtag
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