Aquarana catesbeiana (American bullfrog): 141106299
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Entry
141106299 CDS
T11018
Symbol
ERCC6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
141106299 (ERCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acat03036
]
141106299 (ERCC6)
03400 DNA repair and recombination proteins [BR:
acat03400
]
141106299 (ERCC6)
Chromosome and associated proteins [BR:
acat03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
141106299 (ERCC6)
DNA repair and recombination proteins [BR:
acat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
141106299 (ERCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_14
RHH_8
Motif
Other DBs
NCBI-GeneID:
141106299
NCBI-ProteinID:
XP_073453060
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Position
LG08:235938466..236189666
Genome browser
AA seq
1360 aa
AA seq
DB search
MSDEIPIVKEQPQSEPLSPSSPAIPGPSSSSAHTSSARPEDVAPHKQRGGILHINRKQIQ
AVEASDQASELQGLGLAVYDQEVLERGVLQQVDDAINEAAQAAQIAEAEKKKENLLDELR
SCVTSLRQINKIIEQLAPQAAVSKEIARKLESVKRQKHNKDQQLKKIKAKQRCLAVVLGE
NQEEMDMEQDNLGDIEDVLTTSLGSMLMPCQDSEWEDLIRTGQMTPFGTKILPKEDRKPR
RLMLNDASDFEKYLADQAEMAAHRKRNFTPKKERKKPAVQEDPTKINNTNKLLTIPNAEK
RMKKKMRKLQKKAFQSQFRTGIPRKNNSIPEEGSQGDDNEESVYTSETKEESIDEDDEWV
QDSPGSDYELKPLPRKATTKRPRHPVLDPEFLPSSDEEETESANTGKGRRCRDDGNFKYY
KHRLRQWQKQLSKQAEQHRAAEESEDSDVEFDESFRLPGVLWKKLYKYQQTGVRWLWELH
CQQAGGILGDEMGLGKTIQIIAFLAGLSYSRIRTRGSDYRYEGLGPSIIVCPATVMHQWV
KEFHAWWPQFRVAVLHETGSFPGKKVKLIREIGKGCGILITSYANMRLLQEDLQKYNWHY
IILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPV
FMEQFSVPITMGGYANASPVQVKTAYKCACVLRDTINPYLLRRMKADVKMSLALPDKNEQ
VLFCRFTDEQRQVYQTYIDSKEVYGILNGDMQVFPGLIALRKICNHPDLFTGGPKILKGT
RDEDLEEGEEFGYWKRSGKLIVVEALLRIWQQQGHRALLFTQSRQMLQILEVFIMSMGYS
YLKMDGTTTVASRQPLITKYNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTD
TQARERAWRIGQRREVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDL
YELFTLSSPDAGQGTETSAIFAGTGSDVKLSRPPKKQIRRDINSVNEESSPITVKNKKPV
RCKSPLSATSTLSLCSEGFPQDVLPKNPDLQADLSENLKAVKEHSSSPENNHRKHKAKTK
HQDKGKRLKDGNGERISHLLKQKPFNKAENEEQQEKHKSSDDYVLEKLFKKSGVHSVMKH
DVIMDSSNPDYVLVEQEASRVAQEALRALKVSRQRCNMASSGIPTWTGTSAGLPPKTRFG
QKKNPLLLRPAVSESKIPQDKCKDSKITKQLDVIRTATSSHFNGDTQSKGPTTSALSSSS
LLARMKERNHLLLPSREDSETGATTTDSTEHDELLTDVRNFIAFQAHCEGEASTQELLHE
FENKLSPSQSCVFRELLRRLCTFHRNSNGSGVWRLRPEFR
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgaaattcctattgtgaaagaacagccacagtcagagcctctgtcaccgagc
agcccagctattcctggtccgtcttctagttctgcccatacttcctctgctcgtcctgaa
gatgtggcaccgcataaacaacgtggtggcattttacacatcaaccgtaagcaaatccag
gctgtggaagcatctgatcaggcttcggaattgcagggattgggcttggcagtgtacgat
caggaagtattggagcgcggagtcctccagcaagtggatgatgccattaatgaagctgct
caggctgcacagattgcagaagcagaaaaaaaaaaagaaaatcttttggatgagttacgt
tcctgtgtcacctccttgcgtcaaatcaacaagatcattgaacagcttgctccacaagct
gcagtttccaaagagattgctcgaaaactggagtctgtaaaacggcaaaaacataataaa
gatcagcaactaaagaagatcaaagctaaacaaagatgcctggctgtggtattgggagag
aatcaagaggagatggatatggagcaagataatttaggtgatatagaagatgtgttaacc
acatcattgggtagtatgttgatgccttgccaagatagcgagtgggaagatctcatccgt
actggacagatgaccccgtttggcacaaaaattctcccaaaagaagatcgcaaaccacga
cgcctgatgctcaatgatgcctcagactttgaaaagtaccttgctgatcaagcagagatg
gcggctcatagaaagcgtaacttcactccaaaaaaagagagaaagaaaccagcagtacaa
gaggaccccacaaaaataaataacacaaataaacttttaactattccaaatgctgagaag
agaatgaaaaagaagatgaggaaattacagaaaaaagcttttcagtctcagttcaggaca
ggaattccacgtaaaaataattctatccctgaagaaggtagtcaaggagatgataatgag
gaatctgtttacacatctgagacaaaagaggagagcatagatgaggatgatgaatgggtg
caagatagcccaggctctgattatgagttgaaacctctgcctcggaaagcaactaccaaa
agaccccgacatccagttttagatccagagtttcttccaagttctgatgaagaagagaca
gagtcggccaacacgggaaagggtagacggtgtagagatgatggaaatttcaagtactac
aagcatcgcctacgacagtggcaaaagcagctatctaaacaggcagagcagcatagagca
gctgaggagtcagaggacagtgatgtggagtttgatgagagttttcgattacctggagtt
ctctggaaaaagctgtacaagtaccagcaaacaggtgttcgttggctctgggaactgcat
tgccagcaggcagggggcattctgggagatgagatgggattgggtaaaactatccagata
attgcttttttggcaggtctaagctacagccgaataaggacgcgaggctctgattacaga
tatgaaggactgggtcccagtattattgtgtgtcccgctactgtaatgcaccagtgggtc
aaagaattccatgcttggtggcctcagttccgtgtagctgtacttcatgaaaccggaagt
tttcctggaaaaaaggttaagctgatcagggaaattggcaaaggttgtggtattctgatc
acatcttacgctaatatgcgccttttgcaagaggatctgcaaaaatataattggcattac
atcatcctggatgagggccacaagatccgcaatcctaatgcagcagtcactctggcttgc
aaacagttccgtaccccacatcgtataatcctgtctggttccccaatgcaaaacaatttg
cgggagttatggtctctgtttgactttgtgttccctggaaaactgggtactcttccagtg
ttcatggagcagttttctgtacccatcaccatgggagggtatgcaaatgcttctcctgta
caggttaagactgcatataaatgtgcatgtgtgctacgtgatactataaatccctatctt
ttgagacgtatgaaagcggatgtgaagatgagcctggcacttcctgacaaaaatgaacag
gtgttgttctgtcgtttcactgatgagcagcgacaggtgtaccagacctatatagattcc
aaggaagtctatgggatactaaatggagatatgcaggtgttccctggtcttattgcttta
cgaaagatctgcaatcatccagatttgttcactggaggccctaaaattctaaaggggacg
agagatgaggatttggaagagggtgaggagtttggttactggaagcgctctggaaaattg
atagtcgtagaagcactactaagaatctggcaacagcaaggacacagagctctcctattc
actcaatcacgacagatgttgcagatcctagaggtcttcatcatgagtatgggttattcc
tatctcaagatggatgggaccacaactgttgcctctcgtcaacccctcatcacaaagtac
aatgaggatacttcgatctttgtcttccttcttacaaccagagttggcggtctaggtgtt
aatctcacaggagccaacagagtcattatctacgatcctgattggaaccccagcactgat
acccaggcacgggaaagggcatggagaattggccagaggagagaggttactgtatatagg
ctgctaactgcagggactatagaagaaaagatatatcacaggcaaatctttaagcagttc
ttgactaacagagttttgaaagacccgaagcagaggcgcttcttcaaatctaatgatctt
tatgagttgttcacattgagcagtccagatgcaggtcaaggaacagagaccagtgcaatt
tttgcagggactggctctgatgtgaaactctcaagaccgcctaaaaaacaaataagaagg
gacattaatagtgtaaatgaagaaagttcccctatcactgtaaaaaacaaaaagccagtg
cgatgcaagtctccattgtctgccactagcaccttgtccctttgctcagagggctttcca
caagatgtcttaccaaaaaaccctgatttacaagcagatcttagtgagaacctaaaagct
gtcaaagaacacagctcatccccagaaaacaatcaccgaaaacacaaagccaagacgaaa
caccaggataaagggaaaagactaaaagatggtaatggagagaggatttcgcatttactg
aagcaaaagccattcaataaggcagagaatgaggagcagcaggaaaaacacaagtcaagt
gatgactatgttttggaaaaattgtttaaaaaatctggtgttcatagtgtcatgaagcat
gatgttattatggattcctcaaatccagattatgtgctggttgaacaagaagcaagtaga
gtggcccaagaagcactacgtgccctaaaagtttcccgtcaacgttgtaacatggcctcc
tctggaatcccaacatggaccgggacaagtgctgggctccctccaaaaactagattcgga
cagaaaaagaacccactgttgcttcgacctgctgtttcagaaagcaagatccctcaggac
aaatgcaaggactccaagatcacaaagcagctagatgtgattaggactgctacttcatcc
cattttaatggagatacccagtccaaaggacccactacttctgcattgtcatcctcttct
ttgcttgctcgcatgaaggaaagaaatcatctcttgctcccttcgagagaagacagtgaa
acaggagctacaacaacagactctacagagcatgatgagcttctcacagatgtgagaaac
ttcatagcattccaagctcattgtgaaggtgaagccagcacacaagaactacttcatgag
tttgagaacaaactttctccctcacagtcctgtgtctttcgggaacttttgcgcaggctg
tgtacttttcatcggaatagtaatggttctggagtctggaggctaagacctgaattccgc
tga
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