Aquarana catesbeiana (American bullfrog): 141107566
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Entry
141107566 CDS
T11018
Symbol
TNXB
Name
(RefSeq) tenascin-X
KO
K06252
tenascin
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04510
Focal adhesion
acat04512
ECM-receptor interaction
acat04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141107566 (TNXB)
04518 Integrin signaling
141107566 (TNXB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141107566 (TNXB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
acat00536
]
141107566 (TNXB)
Glycosaminoglycan binding proteins [BR:
acat00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
141107566 (TNXB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
EGF_2
Fibrinogen_C
EGF_Tenascin
DUF7949
hEGF
Fn3_Dep-1_3rd
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
EGF
FN3_Tor_3rd
fn3_2
Motif
Other DBs
NCBI-GeneID:
141107566
NCBI-ProteinID:
XP_073454504
LinkDB
All DBs
Position
LG09:complement(45269953..45454125)
Genome browser
AA seq
2880 aa
AA seq
DB search
MMSLLSLSLIIILFGGSLSAPRTTTQPQCPEAEGIQHLLKRLLILEKLVRDIKGQCSPPC
CGNVQSGADDPSSLKPIPCPQKDDDCPGGCGGDERGTCVDGQCQCKEGFMGDKCQLKACP
EDCNDQGRCKNGRCICFEGYSGESCGIKACPNNCHNNGQCQDGVCICDPGFSGEDCSSRV
CPRNCLNRGICENGICVCYSGYAGVDCGSRSCPNNCNDRGDCEDGACVCDTGFTGPDCGS
RSCLHDCNDNGKCIDGVCVCNPGYSGEDCGYKGCPEDCNEQGQCISGKCVCDAGFVGLDC
GTRICSPECERRGRCEDGECICNPGFTGQDCEIRTCPNDCHKQGRCDDGKCICDPGYTGP
DCALKACPNKCNNRGRCQNGICICNPGFTGLDCGSKACPKNCSGNGQCINGKCICNAGFI
GPVCGTRSCPAECSNHGRCVRGICICSPGYTGVDCSIRTCPKNCHDQGRCEGGVCFCDPG
FTGLDCGTKRCPNDCYDRGHCEDGICVCDYGFTGQDCGSKTCPNDCYNRGRCENGVCVCD
AGYRGEDCNIRTCPNDCHDRGRCEDGVCVCDFGYTGVDCGSRTCPNNCYNHGRCEDGECI
CEPGYTGQDCALRTCPENCKDRGTCDDGKCICFSGYTGPNCGSRTCPNDCKGRGRCEDGI
CICDPGYTDIDCGLKTCLNDCQNQGQCDDGVCICNYGYTGPDCSERTCPENCNNRGSCGN
GKCVCDPGYVGLDCGSQACPENCHVHGQCQDGVCICNSGFTGPDCSSKACPKNCNNNGQC
VNGKCVCDASFTGPVCGTKACPGNCSGRGKCVNGVCTCKKGYTGPACAMEVVDIVAVTGL
QVISQEESAITLEWDQPQVAPDSYDISFKAKKENGIITTTIEGSLISYYQTGLAPGEEYI
VNIQPRKGSTLGPETSITAKTRIEAPRGLRVTDTTSSSLFIRWDKPQFLPDRYIVTLIHP
NGKEKKMRIPGKMDRAKVSGLEADIEYRIILRAEKEQEQSQDTEATGVTAGEERKRLNVE
EKDKDRGSVGTSRTVDTSETTIQRNQHFSLVPKKDLSLEGEDDGILTKETREIITEGKKG
SKLIHTTKNITTIITTIYQTHHVKNGRVGIVHHETKDLDYSSNIPSHSEEEIAIKSVKVD
DDLGKVNPPDSNNNLPGRKAEKWMITKNITHIKTVSKESPTKLQEGEIEDVHRTTSTHSK
VRLPSGGRLSETSSVAKKLREIELLKKKAVSQSSNDGEPTQVYPEGPSSPSQTEDTIYKL
PPTVHRDHLGTLESEITPEVPAKSYFEIEQTGANEENNLGDDQSDPTKSRKQITTLVKVN
RTVNTNRRKVIGRDEDKVVYNETVVVGRGDAVGEPGGKSKNQTRILGPHMKSVIENLPEK
LSLYNGTFIQRLKSYLRATSYPLRGNQTVESVSKAIFLYLIKWKPDSFTGMVYDRLPQKT
PGAKGNSEPIGASRLQGSFGNIENSLPNLGNTTHQTKEGAVLVPKPDSSQTVSLPPIVKS
LGRVEAVGDIDGSSSEVTDKNVAVQHKPKYEVTNVIDSDSSKPISSKSVLDKTDGSQKPS
PKRPITPQKKNERKEDEKKSISETKKVEETNSQDELEKFPPSSHATDYETPARISILGRP
TKKPKEKPSISSVVESGSPNVDHSPDTSLPNKETGKRGNLLQVIDEPNNNQEKSLVINQI
PGSGESQGKVDPIKSPTLAKVPGPGTQGRPSIHQRSPTSMVISLEGLGFLWDRVIILYSP
WPPMDGVTPQKMEVDRGIRQVEIQDLSPGTSYRFDLHGMLRGRSSKSYSLVADTAPLPTM
QPPTQLPPERNTLPPTTTMASTVSPRFPFGGLQVRDVSSDSVTLVWKAKPNVFESFLVRY
EDVSDGATPKETSVPGQQRDVTLRDLTQNTRYAVSVYGIRGGKLSRPLKEEVTTDAAPDG
GSPMPPRLSPITVSDVQTDSFRLTWVPLNGDFDAFVIQYGPSGGPTQEETLRGDQTSYVV
TGLLPRVNYTVQIQGVWADSYSNLETAHVFTEKPQPPRLESISPSDIRSDSVHLTWVVIG
SNFDSFILSYRDGDGRPQEIPLEGDVRSYDVKELKAGKKYKFILYGLTEGKRTKPVTAEI
STEKSIPPRLESLSVSDILSDSLRLSWEVSGGEFDSFLLLYRDAEGKPKEDTLDGEQRKI
TIEDLKPGKKYKFILYGITGGKKSKAVTLETTTVPRKVVPTAASTLVTRLVNFKPSEVTK
DSVTLTWLVEGNVPFEWIVLQYREPEGGIRELLIPGQDTFIIVQGLLPSQKYEFTVYGIK
GNKRSESLSTEVQTGYPETVGPPVVTDLYISPHGPHAIHLSWEALESSFESFIIRYKVQG
QDGPLSTVTADGMDRNLLLSGLQPDTLYTVTLHGIRDGNEQSSMQNTGRTAPLDLEPPKN
LKFSNVQEKSAIVTWDPPNPDTTTFKVSYEPTDGGEPESVSVGGGSTTLKRLTPGTQYEV
TVVSVRGFEESPPLTGSFTTAGGGPRSLRAHDVTEVSALLRWEAPTGPVDQYLVTYRAEN
IPLITVPVPGDRTELPLSGLHPRTEYFVSVQSTHGSTTSAPSSTSFTTSADTPRDLTATQ
ITARTAMLTWKAPDVVPDSYLLTYQTPQGEIKEIRVLSNLTFFLLSQLDSSTQYRVQLHS
LRHGSTSAPISTSFTTGRIRYPYPRDCWEQRMNGEVQSGLFNIFRGGDSQEQKTVYCDME
SDGGGWIVFQRRMDGSTNFYRDWADYKNGFGNMTSEFWLGNIALHQITSSAPYELRVDLR
AGDESAYAVYDDFRVEGENQQFRLRLGKYRGTAGDSMDYHNNMVFSTRDRDTQRRILPCA
MSYRGAWWYRNCHYANLNGLYANNKDHQGVNWKTWKGFEFSIPFTEMKMRPRGMGNWRRL
NT seq
8643 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccctcctttcattgtccctcataatcatcttgtttgggggatcgctctctgct
cctcgaaccaccacccagccgcagtgcccagaggcagaagggatccaacacttgttgaaa
cgcctgctcattttggaaaagttggtgagggacataaagggacaatgttcaccaccctgc
tgtggcaatgtgcagagtggtgctgatgacccttccagtctcaagcccattccttgcccc
caaaaagatgatgactgcccagggggctgtggaggtgatgaaaggggtacttgtgtcgac
gggcagtgccagtgtaaagaaggcttcatgggagacaaatgccagctgaaggcctgccca
gaagactgcaatgaccaaggccgatgcaaaaatggacgttgcatctgctttgaaggatat
tctggtgaatcttgcggcatcaaagcttgtccaaacaactgtcacaataacggacagtgc
caagatggagtttgcatctgcgaccccggattttctggtgaagactgcagctctcgagtc
tgccccaggaactgtctcaaccggggaatatgcgaaaatggaatttgtgtttgctattca
ggatatgcaggggtggactgcggctctagaagctgccccaataattgcaatgatcggggc
gactgtgaggatggcgcctgcgtgtgtgacactggtttcaccggaccagactgtggcagc
agaagctgcctccatgactgtaatgacaatggcaaatgcattgatggggtctgcgtttgt
aaccctgggtactctggggaggattgtgggtataagggttgtcctgaagattgtaacgag
caaggtcagtgcatttctggcaagtgcgtctgtgatgctggatttgtggggctagactgt
ggcactagaatctgttcgccagaatgcgagagacggggcagatgtgaagatggcgagtgc
atctgtaacccaggcttcacagggcaagattgcgagatcagaacttgccccaatgactgt
cacaaacaaggccgatgtgatgatgggaagtgtatatgtgatcctggctacacaggaccg
gactgtgcattaaaggcctgccccaacaaatgcaacaaccggggccgatgtcaaaatggc
atttgtatctgcaaccctggatttactgggctggactgtggatccaaagcctgccccaaa
aactgtagcggaaatgggcaatgcatcaatggcaaatgtatttgtaatgctgggtttatt
ggcccagtgtgtgggaccagatcttgccccgctgagtgctccaatcatggccgctgtgtt
aggggcatttgcatctgctcgcctggttacacaggagtggattgtagcatcaggacttgc
cccaaaaattgccacgaccaaggtcgatgtgaaggaggtgtgtgtttttgtgaccctgga
tttactggtctggattgtggaactaagagatgccccaatgactgctatgaccggggacac
tgtgaagatggcatatgtgtttgtgattatggatttactgggcaggactgcgggtctaaa
acctgccccaatgactgctataaccggggtcggtgtgaaaatggggtctgtgtttgtgat
gctggatataggggagaggactgcaacatcagaacttgccccaacgactgccatgatcgg
gggcgatgtgaagatggggtatgcgtctgtgattttggatacactggtgtagattgtggt
tctaggacctgccccaataattgttacaaccatggtaggtgtgaagacggtgaatgtatt
tgtgaacctggatatactggtcaagactgtgccctcagaacatgtcctgaaaattgcaag
gaccgtggcacctgtgatgatgggaagtgcatttgtttttctggatacacaggtcctaac
tgtggatccagaacttgtcccaatgactgtaagggcaggggccggtgtgaagatggcatt
tgcatatgtgatcctggatatacggacatagactgtggactaaaaacatgtctaaacgac
tgtcagaaccaaggacaatgtgatgatggggtatgtatctgtaattatggatacacaggc
ccagactgtagcgagagaacttgtccagagaactgcaataaccgtggaagttgtgggaat
ggaaaatgtgtctgtgatcctggctatgtcggtttggactgcggttctcaagcttgccca
gaaaattgccatgtccatggacagtgccaagatggagtctgtatctgtaactctggtttt
acagggcctgattgttcatccaaagcctgtcctaaaaactgtaacaacaacggacaatgt
gtcaatggaaagtgtgtctgtgatgccagtttcaccggaccggtctgtggtacaaaagcc
tgtccagggaactgcagtggacgtggcaaatgtgtgaacggggtctgcacgtgtaagaag
gggtataccggcccagcctgtgcaatggaagtcgtagacattgtcgctgtcactggtctt
caggtgatatcacaggaagaatccgctatcaccctggagtgggatcagccacaagttgcc
cctgattcctatgacatctctttcaaagccaagaaggaaaacggcattataaccaccacg
attgagggttcattgatctcctactatcagactgggttggctcctggagaagaatatatt
gtgaatatccaaccccgcaaaggctcaacgttaggaccggaaacttctataactgccaag
acaagaattgaagcaccacgtggactccgtgtgactgataccacctcctcctctttattc
ataagatgggataaaccccaatttctacctgatcgatatattgtgactctaatccatcct
aatggcaaggaaaagaaaatgaggatccctggaaagatggacagagcaaaagtctccgga
ctggaggcagatatagaatacagaatcatacttagagcagagaaggaacaggagcagagc
caggacacagaggccactggagtcacagctggagaagaaagaaagcgtttgaatgttgag
gagaaagacaaggaccgtggatcagtgggaacctctcgtaccgtcgatacctctgaaact
acgatacagagaaatcaacatttttcattggtacccaaaaaagacctctcactagaaggg
gaggatgatggtattcttaccaaggaaactagagagatcattacagaaggaaaaaaggga
agcaaattaatacacacaacaaaaaatataacaaccattattacaaccatataccaaacc
catcatgttaagaatggaagggtaggtattgtccaccatgaaactaaggatttagattac
tcttctaacataccatctcacagtgaagaggagattgcaataaaaagtgtaaaggtggat
gatgatttaggcaaagtaaaccccccggatagtaataacaacttaccaggaaggaaagca
gagaaatggatgattacaaagaacattacccatatcaaaacagtttctaaagaaagtcca
accaaattgcaagaaggagaaatagaagatgtacatcgaactacaagcacccattctaaa
gttcgccttcctagtggtggacgtctatcagaaacttccagtgttgcgaaaaagcttcgg
gagattgaattgttgaaaaagaaagcagtaagtcagtctagcaatgatggagaacctacc
caagtttatccagagggtccatctagtccatcgcaaactgaagatactatctataaatta
ccgcccactgtacatagggatcatctgggtactttagagagtgagataacaccagaagta
ccagcaaaaagctattttgaaattgaacagacaggagctaatgaagaaaataatttagga
gatgatcaatctgatcctacaaaatccagaaagcagattacaactttagtgaaggtaaac
agaactgttaacaccaacagaagaaaagtgataggtagagatgaggacaaggtagtttat
aacgagacagtagtggtaggaaggggagatgctgttggggaacccggaggaaagagcaag
aatcaaaccaggatattgggaccacatatgaagtcggtaattgagaacttaccagagaaa
ctttcattatataatggaacatttattcagcgtttgaagagttacttaagggctacttca
tacccactgagaggcaaccaaacagtggaatctgtatccaaggcaatatttctttactta
ataaaatggaaaccagatagttttacaggaatggtgtatgatcgcctacctcaaaagact
ccaggtgccaaggggaactctgaacccattggggcatcacgtttgcaaggcagttttgga
aacatagaaaatagtttgcctaatttaggcaatactacacatcaaacaaaggagggagct
gtattggtgccaaagccagactcttcacaaactgtttcgcttcctccaattgtaaagtca
ctaggaagagtggaagctgttggagacatagacggttcttcttctgaagtgacagataaa
aatgtggctgtacaacacaaaccaaaatatgaagtaacaaatgtgattgattcagactca
tctaaacctatttcttccaagtcagtattagataagactgatggttcacaaaaaccatct
ccaaaaaggcctatcacaccacagaaaaaaaatgagaggaaagaagatgaaaaaaagtca
atttctgaaacaaagaaggtagaagagaccaacagtcaagatgagttggaaaagttccca
ccaagttcacatgctacagattatgaaactcctgcaaggataagcattttaggaagacca
accaaaaaacccaaagagaagccttctataagctctgtggtagaaagcggttcaccaaat
gtcgaccacagtccagatactagtttacctaacaaggaaacaggcaaaagagggaacctt
ttacaagtcatagatgaacctaataataatcaagagaaatccttagtaattaatcagatt
ccaggctctggtgaaagtcaaggtaaagtggatccaatcaaaagtccaaccttagcaaaa
gtcccaggtcctgggactcaaggaagacctagcatccaccagagaagtcccacaagcatg
gtcatatcattagaaggtcttggatttctgtgggacagggtaataatcctatatagtcca
tggccgcccatggatggtgtcactccccaaaagatggaggtggacagaggcatcaggcag
gtggaaattcaggatcttagcccagggaccagctacagatttgaccttcatgggatgctg
aggggccgctcatccaagtcttattcgttggtggcggacacagctccattacccactatg
caacctcccactcagttgccacctgaaaggaacactctgccaccaaccacaaccatggct
tctacagtgtctccaagatttccatttgggggtctgcaagtgagagacgtttcgagtgac
agcgtcaccctggtgtggaaggccaagcctaatgtttttgaatcgttcctggtccgctat
gaagacgtgagtgatggcgccacaccaaaggagacctctgttcctgggcagcagcgtgat
gtgacactgcgggatctgactcagaacaccagatatgcagtatcagtgtatggcataaga
ggagggaagctatcacggccactgaaggaagaggtgacaacagatgctgccccagacggt
ggatctcctatgcctcctcgcctttccccaataaccgtatcagatgtgcagacagattcc
ttccgtctcacctgggtacctttgaatggtgattttgatgcctttgtcatccagtatggc
ccctcaggtggtcccacccaggaggagactctgcgaggagaccagacatcttacgtggtc
acggggctgctgcccagagtcaattacaccgtacagatccaaggtgtctgggcggatagt
tacagcaatttggaaactgcccatgtatttacagaaaagcctcaacctccacgactggag
tcgatttccccatcagacatccgcagcgattccgtccatctcacctgggtggtcataggt
agcaactttgattcatttattctttcttatcgggatggagatggacgaccacaagaaatt
cctctggaaggagatgtgaggtcttatgatgtaaaagaattaaaggccgggaagaaatat
aaattcatcctatatggcctaacagaaggaaagagaactaaaccggtgactgctgaaatc
agcacagagaaatctattcctccacgtctggagtcactttctgtgtctgacatcctcagt
gactccctccgtctctcctgggaagtgagtggaggggaatttgactcatttctccttctg
taccgcgatgctgagggcaaacccaaggaagacacattggatggggagcagcgtaaaatc
accatcgaagatctgaaaccggggaagaagtataaatttattctgtatggtattacagga
ggaaagaaaagcaaagcggttacattggagaccaccacagtcccaagaaaagttgtccca
actgcagctagtactcttgtcactcgtctggtgaattttaagccttcagaagtgacaaag
gactctgtaacattgacttggctggtggaaggaaatgtgccctttgaatggattgtactg
cagtatagagagcccgagggaggtattcgggagcttctaattccaggacaagacaccttc
atcatcgttcagggactgctaccatctcagaagtatgaattcactgtgtacggaataaag
ggaaacaagaggagcgagtcactgtccacagaggtccagacaggttatcctgaaactgtt
ggtcctcctgttgtcactgacctctatatctctcctcatggtccacatgccatccatctc
tcctgggaggctctagagagctccttcgagtccttcattattcgatacaaagtccaaggt
caggatgggccactgagcactgtgacagctgatggcatggataggaaccttcttctgtct
ggtctacaacctgacactctctacacagtcacattacatggtatccgagatgggaatgag
caaagcagtatgcaaaatacaggaaggacagcacctctagatctggaacccccaaaaaac
cttaaattcagcaatgtgcaggagaaatcagccatcgtcacttgggatccaccaaatcct
gacacaaccacctttaaagtgtcttatgagccaactgatggaggagaaccagaaagtgtc
agtgtgggtggaggcagcacaacactgaaaagactgactccaggaacgcagtatgaggtt
accgttgtttcagttcgaggttttgaagaaagtccaccgctaacaggctccttcaccaca
gctggaggtggcccccgctctttgcgtgctcatgacgtgacagaagtgtcagctcttctg
cgttgggaagcacccacaggacctgtggatcagtatttagtaacctatcgagcagagaac
attccgctgatcaccgtaccggttcctggggacagaactgagcttcctctgtccggctta
catccccgtacagagtactttgtaagcgtgcaaagtacacatggatccacaaccagcgct
ccatcatccacctccttcaccactagtgctgacacccctcgggacctcacagccactcag
atcacagcccgaactgccatgctgacctggaaagcgccagacgttgtacctgattcctat
ctgctcacttaccaaacaccacaaggtgaaatcaaggaaatccgtgttctgtccaatctc
accttcttcttgttgagccagcttgactcatccacacagtacagagtgcagctccactcc
cttcggcatggctccacttccgctcccatttccacctcctttactacaggccgtataaga
tacccctatcctcgggactgctgggagcagagaatgaatggagaggtgcagagtggtcta
ttcaatatatttcgggggggagacagtcaggagcagaagacagtgtattgtgatatggag
tcagatggaggaggctggattgtgttccagaggagaatggacggaagcacaaacttctac
cgtgactgggcagactataaaaatggatttggaaacatgacctctgaattttggcttggt
aacattgctctgcatcagatcacctcctctgcaccctacgagctgcgggtggacctgcgt
gctggagatgagtccgcctacgctgtgtatgatgatttccgagtcgagggtgaaaatcag
caatttagactgcggctgggaaaatacagaggaacagcaggggactctatggactatcac
aacaacatggtcttctcaacccgtgaccgggacactcagcggaggatcctgccatgtgcc
atgtcataccgaggagcgtggtggtaccgcaactgccactatgccaatctcaacggtcta
tatgccaacaacaaagaccaccagggtgtaaactggaaaacgtggaaaggttttgaattt
tccatccctttcaccgagatgaaaatgcgtccacgaggcatgggcaattggcgcagatta
tag
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integrated database retrieval system
