Aquarana catesbeiana (American bullfrog): 141107866
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Entry
141107866 CDS
T11018
Symbol
DHX16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141107866 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acat03041
]
141107866 (DHX16)
Enzymes [BR:
acat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
141107866 (DHX16)
Spliceosome [BR:
acat03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
141107866 (DHX16)
Complex C
U4/U6.U5 tri-SnRNP related factors
141107866 (DHX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
nSTAND3
Flavi_DEAD
PWI
Med12
Motif
Other DBs
NCBI-GeneID:
141107866
NCBI-ProteinID:
XP_073454994
LinkDB
All DBs
Position
LG09:complement(87326340..87409520)
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AA seq
1033 aa
AA seq
DB search
MDVVEAWVRDQLHEILGMSDRHVAQFLVGTAQRSSSSVDFLSRLTSTGAIDVTDKVRSFA
EELWLKLPHKAPVERPARAAEREALAMQKKNKSYTLLEDSDEDEAKEESKYDKKKRKKHL
RKRRKEESSDSESDHAQKEKASSPQMISDEEDQEEIDRLKDLEERDAFAERVKKRDKEKT
RNIVERSDKKAYEEAQKRLKLAEEDRKKMVPELRKKSRRDYLVKREKDKLEDLEAEIADE
EYLFGPGLTAHEKKNLEYKRTVRDLANEYEKAKKKQHIETHDRYVMPEETRSKKIPDRYE
EPVTEERFAPREEQRRWEEEHIGAAALSFGAKDARARGQKQYDYVMEEDEVIQFVSAIQI
KGTVEKEDENEKALSELEKKKLSLQEVRRSLPVFPYREDLLKAIAEHQILIIEGETGSGK
TTQIPQYLHEEGYTHNGMKIGCTQPRRVAAMSVAARVSQEMSVKLGNEVGYSIRFEDCTS
ERTVLKYMTDGMLLREFLTEPDLAGYSVVIIDEAHERTLHTDVLFGLIKDIARFRPDLKV
LVSSATLNTERFSSFFDDAPVFRIPGRRYPVDIYYTKAPEADYLEACVVSVLQIHVTQPF
GDILVFLTGQEEIEACVEMLQERCRRLGSKIAEMLVLPIYANLPSDMQAKIFDPTPPGAR
KVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARSGMESLIVTPCSKASANQRAGRAGR
VAAGKCFRLYTAWAYKHEMEDTTVPEIQRTNLGNVVLLLKSLGINDLIHFDFMDPPPHET
LVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEKYRCSEQILTIAAMLS
VNNAIFYRPKDKLVHADTARVNFTVPGGDHLVLLNVYTQWVETGHSLQWCYENFIQARSL
RRARDVREQLEGLMGRIEIELTSCEGDNVPIRKAITAGYFYHTARLSRSGYKTVKQQQAV
FIHPNSSLHEEQPRCVIYHELVFTTKEYMRQIIEIDSPWLLEVAPHYYKSKELEDAASKK
MPKQIGKSKDELG
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggtggaagcctgggtgagagatcagctccatgaaattctgggtatgagcgat
cgtcatgtggcccaattccttgttggcactgctcaacggagttcaagttctgtagatttt
ctaagccgcctaactagcacaggagcaatcgatgtcaccgataaagtgcgaagctttgcg
gaggaactttggttgaagcttccccataaagcgccagttgaacgcccggctcgggcagca
gagcgagaggccctggccatgcaaaagaaaaacaaatcctacacccttctggaggatagc
gatgaggacgaggcaaaggaagagagcaaatatgacaagaaaaaaaggaagaaacatctg
aggaagaggaggaaagaagagtcgtctgacagtgagagcgaccatgcacaaaaagaaaaa
gcttcatctcctcagatgatctcagatgaagaagaccaagaagagatagatcggttaaag
gatctggaggaaagagatgcttttgcagaaagagtaaagaagagagataaggagaaaacc
aggaatattgtggagaggtccgataagaaggcatatgaagaagcacagaagagactaaag
ctggcagaagaagatcgtaaaaaaatggtaccagagctaaggaagaagtctcggcgggac
tatttggtgaagagagaaaaggacaagctggaggacctggaggctgagatagcagacgaa
gaatatttgtttgggcctgggctgacagcacatgagaaaaaaaatttggagtataagcgc
acagtgagggatctggcgaatgaatacgaaaaagccaaaaagaagcaacacatagaaaca
catgaccgttacgttatgcctgaggagaccaggagtaagaaaattccagaccgttatgag
gagccggtgacagaagagcgttttgcccctcgtgaagaacagaggcgatgggaggaggag
cacattggagcagcagctctgtcatttggtgcaaaggatgctcgtgcacggggacaaaag
cagtatgactatgtgatggaggaagatgaggtgatacagtttgtcagtgcaattcaaata
aaaggaactgtagagaaggaagatgaaaacgaaaaagcactatcagagctggaaaagaag
aaattgtccctgcaagaggtgcgacgcagccttcctgtcttcccgtaccgagaagatctc
ctcaaggccattgctgagcatcaaattctaattattgaaggggagactggatccggcaag
acaacccagatcccacagtatctgcatgaagaaggttacactcataatggaatgaaaatc
ggatgcactcagcctcgaagagtggcagccatgagtgtggcagctcgtgtgtcacaggaa
atgtctgtgaaactgggcaatgaggttggatacagcattcggtttgaggactgcacgtct
gagcgcactgtgttgaagtatatgaccgacggaatgttgctgcgtgagtttctcacggaa
ccagacttggctggttacagtgtagtaattatagatgaagcccatgagcggactttgcat
acagacgtgttgtttggcctcattaaggacattgcccgttttcgaccagatctcaaggtc
ctagtctccagtgccactctgaacacagagcgcttttcttcattctttgacgatgcaccg
gttttccgaattcctggacgtcggtaccctgtggatatctattacaccaaggccccagaa
gctgattacctagaggcgtgtgttgtgtccgttctacagattcatgttacgcagccattt
ggagacatattggtgttcttgacagggcaggaagagattgaggcgtgtgttgagatgtta
caggaacggtgtcgccggcttggctcaaagatcgcagagatgcttgttctaccaatatat
gccaacttaccatcagacatgcaggccaagatcttcgatcccaccccgcctggagccaga
aaggtcgtcgtagctaccaacattgcagagacctcgctgaccatagatgggatcatttat
gtcatcgatccaggattttgcaagcaaaaaagctacaatgcacgttcaggaatggagtcc
cttattgttactccatgctctaaggcttccgccaatcagagagcaggaagagctggtcgt
gtggctgcagggaaatgtttccggctgtatacagcctgggcatacaaacatgaaatggaa
gatacaacagtgccagaaattcagaggactaacctggggaatgtggtgttgttgctgaag
agcttaggtatcaatgatctcatccactttgacttcatggatcctcctcctcatgagact
ctggttctggctctggagcagctgtatgccttgggggcccttaaccacctgggcgagctc
actaagctgggaagaagaatggctgagctcccagtggatcccatgttatccaagatgatt
ctggcttctgagaagtatcgctgttcagagcaaatactcaccattgctgctatgttgtct
gtgaacaacgcaattttctatagaccaaaagataaattagtccatgcagatacagctcgt
gtcaacttcactgttcccgggggagaccacttggtgctgctcaatgtgtacacccagtgg
gtggagactggacactcgctgcagtggtgctatgagaactttatccaggctcgctccctc
cgccgagcccgagatgtcagagagcagctagagggactcatgggaaggatagaaattgag
ctgacatcatgtgaaggggacaatgtacctatccgtaaggctatcacagctggctatttc
taccacacggctaggctcagccgcagtgggtacaagacagtgaagcagcagcaagctgta
tttatacatccaaacagtagtctgcatgaggagcagccacgctgtgttatataccatgag
cttgtcttcaccaccaaggaatacatgagacagatcatagagattgacagtccatggctg
cttgaagtagctccacattactacaagtccaaagagctggaagatgcagcaagtaagaag
atgccaaaacaaattggaaaaagcaaagatgagctgggctga
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integrated database retrieval system
