Aquarana catesbeiana (American bullfrog): 141108137
Help
Entry
141108137 CDS
T11018
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03018
RNA degradation
acat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141108137 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
141108137 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141108137 (LSM4)
03041 Spliceosome [BR:
acat03041
]
141108137 (LSM4)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
141108137 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
141108137 (LSM4)
Spliceosome [BR:
acat03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
141108137 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
141108137
NCBI-ProteinID:
XP_073455524
LinkDB
All DBs
Position
LG01:609164206..609190774
Genome browser
AA seq
140 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVMSKGRGRGGMQQQKQMKGRGGGGAGRGGVFGGRGRGM
PGGGRGGSQDKKPGRQAGKQ
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctttatctctgttgaagactgcgcaaaaccatcctatgttggttgaattaaag
aatggtgaaacttacaatgggcacttggttagctgtgacaactggatgaacatcaattta
cgtgaagtaatttgtacttctagggatggtgacaaattttggagaatgcctgagtgctac
atacgtggtagcacaataaaatacttgcgcatccctgatgaaattattgatatggtgaaa
gaagaagtgatgtcaaaaggcagaggtcgtggtggaatgcagcaacagaagcagatgaaa
ggaagaggaggtggtggagctggacgcgggggggtttttggtggaagaggtagaggaatg
cctggaggtggcagaggtggttcccaggataaaaagccaggacggcaagctgggaaacaa
tga
DBGET
integrated database retrieval system
