Aquarana catesbeiana (American bullfrog): 141108154
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Entry
141108154 CDS
T11018
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
acat Aquarana catesbeiana (American bullfrog)
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141108154 (ZC3H12B)
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
141108154 (ZC3H12B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
141108154
NCBI-ProteinID:
XP_073455556
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All DBs
Position
LG09:complement(191259113..191422913)
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AA seq
854 aa
AA seq
DB search
MTAWSMVRKLEMEKTRPSKEERAATIEMEYEMGDCSGESDEWTSSESEAEQQGGKSALGS
YVSTLFQGMDISSKPHRQLCRSPCLDRPSFSQGSIQVPLEQLTKSDDAKSSLDREYQAKM
DFALKLGYGGEQIQAVLNKLGADALINDVLAELVRLGNKGESEAQTSGGNLSSNLVPRGP
CTKEITSPELSLEDEVVDSSDNLRPIVIDGSNVAMSHGNKEVFSCRGIQLAVEWFLEKGH
KDITVFVPAWRKEQSRPDAPITDQEVLRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKL
AFDSDGIIVSNDNYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFW
RKKPVVPEHKKQPCPYGKKCTYGHKCKYYHPERANQPLRSVADELRISAKLSAVKTMSEG
ALVKCGTGPSNSKGDGSMEIKRIAPKRQSDPSIRSAAVEPEQRLSAARKSEANSVPSLVS
ALSVPTLPPSKSHAVSALNTRSASSPVPGSSQFSHQKSSLEHMTSIHYPPILVTNSHGNS
VSYNEEYPKYDSLGDHGYYSMLSDFSNLSISSMHSSEYYSTEQDRAAFSRNSSPCPDSCM
SHTSSDSYSSYSDLYLGISDPGPEDTIKPQRPPPHNRLQPFAHGYHEALTRVQSYGQEEP
MQNSRKQSSSHLALHIQHPLVGARSSCPGDYPAPENMHPSANAQPGRALVMTRMDSISDS
RLYESNPMRQRRPPLCREQHASWDPLPCPTDSYNYHSYPLSNSLMQPCYEPVMVRSMPEK
MEQLWRSPHWPVMASEHREQHIIPEHQYQTYKNLCNIFPPGMVLSVMEKNPHMTDAQQLA
AIIVSRLRSGHQHC
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtccatggtcagaaaactggaaatggaaaagacaaggccgtccaaagaa
gagcgggcggctacaattgagatggaatacgagatgggagactgcagtggagaatctgat
gaatggaccagctctgaaagtgaagcagaacagcagggaggaaaaagtgccctcggcagc
tatgttagtaccctttttcaaggcatggacatttccagcaagccacacagacaactctgc
agatccccctgtctggaccgtcccagcttctctcagggcagtattcaagttccccttgaa
caactaaccaagtcagatgatgcaaagagcagcctagacagagaatatcaagcaaaaatg
gactttgccctaaagttgggctacggtggagaacaaatccaagctgtcctcaacaagttg
ggggcagatgctcttattaatgatgttctggcagagctggtgaggctaggcaataaggga
gagtcggaagcacagactagtggaggcaatttgagtagcaatcttgtacctagaggccct
tgcaccaaagagataacaagtcctgaactgtctttagaagatgaagttgttgacagttca
gataaccttagaccaatcgtcattgatggaagtaatgtagcaatgagccatggcaataaa
gaggtcttctcatgccgaggaatacagctggctgtggaatggtttctggagaaaggccac
aaagacatcactgtctttgtaccagcttggagaaaggagcagtctcgacctgatgccccc
attacagaccaggaggttcttcgaaagctcgagaaggagaaaattcttgtgtttacgcca
tcccgccgggtgcagggtcgcagagtggtttgctatgatgatcgtttcattgtcaagctg
gcctttgattctgatggcatcattgtatctaatgataactaccgagacctccaaaatgag
aagcctgagtggaagaagttcattgaagagaggctccttatgtattcatttgtcaatgac
aagtttatgcctccagatgacccactaggaaggcatggccccagtctagaaaacttctgg
cgtaaaaagcctgttgttcctgagcataagaagcaaccatgtccctatgggaagaaatgt
acgtatggtcacaaatgtaaatactaccaccctgagagggcaaaccagcctctgcgatca
gtagccgatgaactcagaataagtgcgaaactgtcagctgtcaagactatgagtgaaggt
gcattggtaaaatgtggtactgggccatctaattccaagggagatggatccatggaaata
aagagaattgctcctaaaagacaatctgatcctagtattcgttctgcagctgtagagcca
gaacagaggctttcagcagcccgcaaatcagaggccaactctgtgccatcacttgtatct
gccttgagcgtgccaactcttccaccttccaaaagtcatgctgtcagcgctttgaacaca
cgttcagcaagcagccctgtgcctggatcatcacagttctcccaccagaaatcctctttg
gagcacatgacaagcattcattatccaccgatactggtcactaacagtcatggcaattct
gtcagttacaatgaggagtatccaaaatatgactctctgggagaccatggttattactca
atgcttagtgatttttctaatttgagcataagcagtatgcacagttctgaatactacagc
acagagcaggaccgagcagcattttcaaggaactccagcccatgtccagatagctgcatg
agtcacactagcagtgactcctactcatcatacagtgacctatatttgggcatctctgat
cctggacctgaagatactatcaaaccccaaaggccacctccacataataggctacagcca
tttgcacatggctaccatgaagctttaacacgagttcagagctatggccaggaggagcca
atgcagaattcccgcaagcagtcctcctcgcatctggctttacatatacaacatccactt
gttggggcaaggtccagctgtcctggagattacccagcaccagagaatatgcatccttct
gctaatgctcagcctgggagagcactggtcatgactagaatggatagcatttcagactcc
cgtctttatgagagtaaccccatgcggcaaagacgacctccactgtgccgtgaacaacat
gctagctgggaccctttaccttgccccactgactcctataattaccactcatacccactt
agtaatagtctcatgcagccatgctatgaaccagtcatggtaagaagtatgcctgagaag
atggaacagctctggagatctcctcactggccagttatggctagtgagcatagagagcag
cacatcattccagagcatcagtatcagacctacaaaaacctatgtaacatctttcctcct
gggatggtactctctgtcatggagaagaacccacatatgaccgatgcccagcagcttgca
gccattattgtatcaaggttacgatcaggtcatcaacactgttaa
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