Aquarana catesbeiana (American bullfrog): 141108164
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Entry
141108164 CDS
T11018
Name
(RefSeq) uncharacterized protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
141108164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acat03019
]
141108164
Messenger RNA biogenesis [BR:
acat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
141108164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
141108164
NCBI-ProteinID:
XP_073455577
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Position
LG09:194148482..194219878
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AA seq
534 aa
AA seq
DB search
MEEPSDAAGGAPTLPVAPDTALPMATESLEEELWLYGGSPTPSPDETGSTSGPTQSFDPL
HDISSGSLEQKEGSLQITQSFSDAEEDSDTDSDDVEVTIGDIHPSCMESAGTQNVKGNRG
YGAVGKLPPRGIDFTAPGCINGVPVLEVDLESFEEKPWRKPGADISDYFNYGFNEATWKV
YCEKQRRLQLGMDSAYYTHSKENKIMVQQGRTGNVDRGRENRFEDTEMQFNKPGCKEGKT
VSETSQNGNQTGSTDAVVGEICNIARVEGRRWDIQEQDEILFEVVANHGYKPHGMIQHQQ
PPPPLLPPPNIAPNPPVYNGLPPPPLFFQRPPTPSQAPLHPPALLPPPLVPPPPVHIPPP
GGPPVTYNNRPPPHNGYYNTGQGVVNYHSVSTDQTSWVTTVDKGTSSLGGNDWMARRQRE
RELDRPRNLNLTSYKSESDRYVNYNRERSYDCERKHRHSLDHTWNKEDKSRAEPKQRERD
ESSKHKSSSRRKQDSEEKETHRRHKRKKSKRGKEEKSADEEDVSTRRNRHELRE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggaggagccatcagacgcagccggaggggcccccacccttcctgtggccccggacacc
gcattaccaatggccaccgagagcctggaggaggaactgtggctgtacggaggttctcct
actccctctccagatgagactgggtcaacctctggacctactcagtcatttgatcccctt
catgatatctctagtgggagcctggagcagaaggaagggtcactacagatcactcaaagc
ttcagtgatgccgaagaggacagcgacactgacagtgatgatgtggaggtcacaatcggt
gatattcatccatcctgcatggaatctgcaggaacccaaaatgtcaaaggaaacagaggc
tatggagcagttggtaagctcccaccgagaggaatagattttactgctccaggttgtatt
aacggagtgcccgttcttgaggtggatttggagtcttttgaagaaaaaccttggagaaag
ccaggtgctgacatttctgattacttcaactatgggtttaatgaagcaacctggaaagtg
tattgtgagaaacaaagaagacttcagctgggaatggacagtgcttattatacacacagc
aaggagaataaaataatggtgcagcaaggcagaacgggtaatgtggacagaggaagagaa
aatcgctttgaagacactgaaatgcagtttaataaaccaggttgtaaagaagggaaaacc
gtttctgaaacctcccagaatggaaatcagactggaagcactgatgcagtggttggggag
atctgtaatatagctcgtgttgaaggcaggagatgggacattcaagaacaagatgaaatt
ctgtttgaggtggtagctaatcatgggtataagccccatggcatgattcagcatcagcag
cctcctccacctcttttacctccaccaaacattgctccaaatcctccagtgtacaatgga
cttcctccaccgcctctattcttccagcgcccacctactccctctcaggcaccacttcat
cctccagcattgcttcctccccctcttgtaccccctcctcctgtccatattccgccacct
ggtggccctcctgttacttataacaatagaccacctcctcacaatggctattacaacact
gggcaaggtgtggtgaattaccattctgtctcaactgatcagacttcctgggtgacaact
gtagacaaaggtaccagcagtcttgggggaaatgactggatggcacgcaggcaaagggag
cgggaacttgatagacccagaaacctaaatctgaccagttataagagtgaaagtgatcga
tatgtgaattacaaccgggaaagaagttatgattgtgaacgtaaacatcggcacagcctt
gatcatacctggaacaaagaggacaaatcccgagctgagccaaagcagagggaaagggat
gaaagctccaagcataagtcttcgtcaaggcggaagcaagacagtgaagaaaaagaaaca
catcggcgccataagcgtaagaagagtaaacgaggcaaagaagagaaaagtgcagacgaa
gaagatgtcagcacacgtagaaaccggcatgaattacgggagtaa
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