Aquarana catesbeiana (American bullfrog): 141110825
Help
Entry
141110825 CDS
T11018
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
acat Aquarana catesbeiana (American bullfrog)
Pathway
acat04140
Autophagy - animal
acat04148
Efferocytosis
acat05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
acat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
141110825 (VPS11)
04148 Efferocytosis
141110825 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
141110825 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acat04131
]
141110825 (VPS11)
Membrane trafficking [BR:
acat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
141110825 (VPS11)
Hops complex
141110825 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
zf-RING_2
TPR_Vps41
zf-C3HC4
zf-rbx1
PH_20
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
TPR_GEMI5
DLP_helical
zf-ANAPC11
GHL13
Beta-prop_EML_2
zf-C3HC4_3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
141110825
NCBI-ProteinID:
XP_073458568
LinkDB
All DBs
Position
LG10:112735527..112829089
Genome browser
AA seq
914 aa
AA seq
DB search
MAVYLQWRRFVFFEKESVRFPGEGGKALSLPPGIIVCDSGRGSLLFGDMTGQIWFLSRSL
QLTSFQAYKLRVTHLHQLKQHNILVSVGEDEEGTNPLIKVWNLEKRDGGNPLCTRIFPAI
PGNKPTVVSCITVHENLNFMAIGFADGSVVLTKGDITRDRHSKIQILQEGSYPVTGMAFR
QTGKTTHLFVVTTENVKAYELTPKDYPFTELDSHGCGLRCSALSDPSQDMQFVVAGNECV
YLYQPDERGPCFAFEGQKLIVHWYRGYLIIVTRERSDFAARSGDTHAPDKQTLTIYDLGN
KLIAYSCTLTEVVDVLAEWGSLYVLTGDGFLHAFHEKDTQTKLEMLFKKNLYVMAISLAK
SQHLDSDGLSEIFRQYGDHLYNKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTA
YLQALHLQSLANADHTTLLLNCYTKLKDSAHLEEFIKASVDEVHFDVEIAIKVLRQAGYH
SHALYLAEKHAHHEWYLKIQLEDIKNFQEALRYIGRLPFPQIESNMKCYGKILMYHVPNE
TTQLLKDLCTNFAQHEGGKKANPEEFIPIFANNPCELKNFLEHMIQVQNDSPQGVYDTLL
ELRLQNWAHERDPQARQQLQNDVMTLLKSGRFKNVFDKALVLCQMHNFQKGVLYLYEQGK
LFQQIMHYHMQNNQYQEVIEACKQYGEQESSLWEQALGYFARKEEDCKEHIATVLKHIES
KNLMPPLLVVQTLAHNSTATLSVIRDYLINKMQKLSQQTEEDERTVNKYREETARIRRDI
HELRNSPKIFQKTKCSICSSALELPSVHFLCGHSFHQHCFESYADSDSDCPTCLPENRQV
LDMIRAQEEKKDLYDHFQHQLKYSNDGFSVVADYFGRGVFNKLTLITDAPTEKSRITKDV
GLQRDLLMNTRRNV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtacctgcagtggaggcgcttcgtgttctttgagaaggagtcggtgcggttc
cccggggagggcgggaaggctctgtccctgccgccggggattatagtgtgtgactccggg
cggggcagcctgctgtttggggatatgacagggcagatttggttcttgtctcgatccctt
cagctcacctccttccaggcttacaagcttcgtgttacccatcttcatcaactcaaacaa
cacaatatccttgtttctgtaggggaggatgaagaaggcactaacccgctgattaaagtt
tggaatttggaaaaacgtgatggtggtaacccactttgcactagaatttttccagccatt
cctggcaataaacccacagttgtgtcctgcatcacagttcatgaaaacctcaacttcatg
gctattggttttgcagatgggagcgtggtgttaaccaagggtgacataacacgtgacaga
cacagtaagatccaaattttgcaggaagggagctatcctgttacaggcatggctttcagg
caaactggcaagacgacccatctatttgttgtaacaacagaaaatgtgaaggcttatgag
ttgacacctaaggattacccattcacagaactagattctcatggctgtgggctgcgttgc
tcagccttgtctgatccatctcaagacatgcaatttgtggtggctggtaatgaatgtgta
tatttataccaaccagatgaaagagggccctgctttgcttttgaaggacagaaattgatt
gtgcattggtatcggggctatctgatcatcgtaacaagagagagatcagactttgctgca
cgctcaggagatacccatgcacctgacaaacagacattgacaatttatgatttgggaaac
aagcttattgcatacagctgcacactgactgaggtggttgatgttttggctgaatggggc
tctctttatgttctgacgggtgatggcttcctgcatgctttccatgaaaaggacacacag
actaaactagagatgctgtttaagaaaaacctgtatgtaatggccatttctctggcaaaa
agtcagcacttggacagtgatggattatctgagatctttcgccaatatggagatcatctg
tataataaaggagatcatgatggggctatccaacaatatatccgaacaattggaaaatta
gagccttcctatgttatccgaaaatttctggatgcccagaggatacataatttgacagcg
taccttcaggctttgcatttacaatctctagccaatgcagaccacaccactctcttacta
aactgctatacaaagctaaaggacagcgcccatctggaggagttcattaaagcaagcgtg
gatgaggtacattttgatgtagaaatagctattaaggttcttcggcaagctggttatcat
tcacatgccctgtacttagcagagaagcatgcccatcatgaatggtacttaaaaatacag
ctagaagatatcaaaaattttcaagaagctttgagatacataggacgccttcccttccct
caaatagaaagcaatatgaaatgctatggaaagatacttatgtatcatgtgcccaatgag
acaacacagctgttgaaagacttgtgtaccaactttgctcagcatgagggaggaaagaag
gcaaatcctgaagagttcattcctatttttgccaacaatccttgtgaattaaagaacttt
cttgaacatatgatacaagtacagaatgattcgcctcagggggtatatgatactttgctg
gaattacgtctgcaaaactgggcacatgagagagacccacaagcaaggcagcaactccaa
aatgatgtcatgacgcttctgaagagtgggcgctttaagaatgtgtttgataaagctctt
gtcctatgccaaatgcacaattttcagaaaggagtgctgtatttgtatgaacaaggcaaa
ctttttcagcagattatgcattatcacatgcaaaacaatcagtaccaagaagtgattgaa
gcttgtaaacagtatggggagcaagagagttctctgtgggagcaagcgcttggttacttt
gcccgcaaagaggaagattgtaaggaacacattgccactgtgctgaaacatatcgaaagt
aaaaatctcatgcctccactattagtggtgcagaccctggctcataattccacagccact
ctgtctgtgatcagggactatttaatcaacaaaatgcagaaactgagccagcagacagaa
gaagatgaaagaactgttaataagtacagggaggaaacggctcgcattcgccgagatatc
catgaactgcgtaacagccccaagattttccagaagactaaatgtagtatctgcagtagc
gctttagaacttccgtctgtgcacttcttgtgcggtcattcctttcaccaacactgcttt
gagagctatgcagacagtgactccgactgcccaacctgcctgcctgagaatcgccaagtc
cttgatatgatcagggctcaggaagagaagaaagacctctatgaccacttccagcaccag
ctgaagtactccaatgacggattcagtgtggttgcagactattttggtcgtggtgtgttc
aacaagcttacactaattacagatgcccctacagaaaaatccagaataactaaggatgtg
gggttacaacgggacctgcttatgaacaccagaagaaatgtttaa
DBGET
integrated database retrieval system
